##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547556_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2342281 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48440387810002 31.0 31.0 33.0 30.0 34.0 2 31.92368678224346 31.0 31.0 34.0 30.0 34.0 3 32.101276063802764 33.0 31.0 34.0 30.0 34.0 4 35.80895844691563 37.0 35.0 37.0 35.0 37.0 5 35.71670820025437 37.0 35.0 37.0 33.0 37.0 6 35.75495467879388 37.0 35.0 37.0 33.0 37.0 7 36.03442755160461 37.0 35.0 37.0 35.0 37.0 8 35.98850052576954 37.0 35.0 37.0 35.0 37.0 9 37.67888310582718 39.0 38.0 39.0 35.0 39.0 10 37.25249873947661 39.0 37.0 39.0 34.0 39.0 11 37.05790423949987 39.0 37.0 39.0 33.0 39.0 12 36.647799303328675 39.0 35.0 39.0 33.0 39.0 13 36.513414060909 39.0 35.0 39.0 32.0 39.0 14 37.56013817300315 40.0 36.0 41.0 32.0 41.0 15 37.7711944040873 40.0 36.0 41.0 33.0 41.0 16 37.84924951361515 40.0 36.0 41.0 33.0 41.0 17 37.78694571658994 40.0 36.0 41.0 33.0 41.0 18 37.717395137474966 39.0 36.0 41.0 33.0 41.0 19 37.71542654361283 40.0 36.0 41.0 33.0 41.0 20 37.62759207797869 39.0 35.0 41.0 33.0 41.0 21 37.503797793689145 39.0 35.0 41.0 32.0 41.0 22 37.44923815716389 39.0 35.0 41.0 32.0 41.0 23 37.369541058481026 39.0 35.0 41.0 32.0 41.0 24 37.31193994230411 39.0 35.0 41.0 32.0 41.0 25 37.26294539382764 39.0 35.0 41.0 32.0 41.0 26 37.28140816580077 39.0 35.0 41.0 32.0 41.0 27 37.2633714742168 39.0 35.0 41.0 32.0 41.0 28 37.249195976059234 39.0 35.0 41.0 32.0 41.0 29 37.208739258867745 39.0 35.0 41.0 32.0 41.0 30 37.13796423230176 39.0 35.0 41.0 32.0 41.0 31 37.022954974232384 39.0 35.0 41.0 31.0 41.0 32 36.946720312379256 39.0 35.0 41.0 31.0 41.0 33 36.86781005353328 39.0 35.0 41.0 31.0 41.0 34 36.79642408404457 39.0 35.0 41.0 31.0 41.0 35 36.7123735367362 39.0 35.0 41.0 31.0 41.0 36 36.66845566351774 39.0 35.0 41.0 31.0 41.0 37 36.63234855254344 39.0 35.0 41.0 30.0 41.0 38 36.524670609546845 39.0 35.0 41.0 30.0 41.0 39 36.46404252948301 39.0 35.0 41.0 30.0 41.0 40 36.387152950478615 39.0 35.0 41.0 30.0 41.0 41 36.33712522109858 39.0 35.0 41.0 30.0 41.0 42 36.35066629494924 39.0 35.0 41.0 30.0 41.0 43 36.333644853030016 39.0 35.0 41.0 30.0 41.0 44 36.21273152111126 38.0 35.0 41.0 30.0 41.0 45 36.141036024285725 38.0 35.0 40.0 30.0 41.0 46 36.1080843844099 38.0 35.0 40.0 30.0 41.0 47 36.04979376940683 38.0 35.0 40.0 30.0 41.0 48 35.96166429220064 38.0 35.0 40.0 29.0 41.0 49 35.899558165736735 38.0 35.0 40.0 29.0 41.0 50 35.815854289045596 38.0 35.0 40.0 29.0 41.0 51 35.36497414272669 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 7.0 12 8.0 13 5.0 14 21.0 15 58.0 16 119.0 17 234.0 18 557.0 19 1005.0 20 1827.0 21 3065.0 22 4861.0 23 7215.0 24 10549.0 25 15670.0 26 21424.0 27 26351.0 28 31097.0 29 37174.0 30 45476.0 31 57479.0 32 73728.0 33 98520.0 34 167275.0 35 229331.0 36 168211.0 37 227114.0 38 367367.0 39 746281.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.519838567618486 23.976755991275173 29.41717923682086 14.086226204285483 2 29.003736101688908 25.90517533976496 31.727790132780825 13.36329842576531 3 29.807183681206485 25.189249283070648 31.784316228496923 13.219250807225949 4 27.80648436289241 27.96667009637187 29.611348937211208 14.615496603524514 5 24.37717763154805 31.617384933746205 28.60971847528115 15.395718959424595 6 22.263511508653316 41.27570517798676 25.63257781623981 10.828205497120114 7 88.86986659585251 3.5339056244746043 5.690606720542924 1.9056210591299676 8 89.06002311422071 2.9087457909618872 5.669857715619945 2.3613733791974574 9 83.78964778350677 5.7406007221166035 7.098934756333676 3.370816738042959 10 39.05983099380476 35.83976474214665 13.801717214971218 11.298687049077373 11 32.245405226785344 24.757789522264833 26.643771605541776 16.353033645408043 12 31.483370270262196 22.377673729155468 28.012693609349178 18.126262391233162 13 25.434949948362302 25.832297661979926 28.629613611688775 20.103138777968997 14 17.690063660167162 30.1530004299228 30.21981564124885 21.93712026866119 15 16.91351293888308 30.890700133758504 34.67897318895555 17.516813738402863 16 22.831334071360352 28.579875770669698 31.780431126752084 16.808359031217858 17 23.744674528803333 27.846360022559207 26.466423114903805 21.942542333733655 18 22.568812196316326 29.599053230590183 29.475071522161517 18.357063050931977 19 23.7338303986584 30.368687616899937 26.895235883312036 19.002246101129625 20 25.272971091000613 30.022998948460923 27.414857568327626 17.28917239221084 21 25.370568262304992 27.858527648902932 30.613833267656616 16.157070821135466 22 24.63316741244966 22.530388113125625 30.65264159167922 22.183802882745496 23 21.509502916174448 26.514068978060273 31.541433329305917 20.43499477645936 24 20.390892467641585 27.379678185495248 33.589863897628 18.639565449235167 25 21.213765555883345 30.12409698067824 29.07375331994752 19.5883841434909 26 19.771154699201336 33.048938193154456 26.44298442415748 20.73692268348674 27 18.349420927719603 33.19016804559317 29.675090221882005 18.78532080480523 28 16.6955203069145 30.9236167650252 32.99104590781379 19.389817020246504 29 17.938667478411002 28.19853809171487 32.5609950300583 21.30179939981582 30 20.8296954976794 28.546788365699932 31.08866954904215 19.53484658757852 31 23.908361123195725 27.601982853466346 28.157210855571986 20.33244516776595 32 24.349341517947675 28.3899754128561 28.237645269717852 19.02303779947837 33 24.000536229427638 27.80802132622004 27.19929846162779 20.99214398272453 34 19.873106599933994 27.07937262864703 31.244287085964494 21.80323368545448 35 20.730732136750458 27.74146227544859 30.20026205224736 21.32754353555359 36 22.98238341172558 28.72567381966553 28.734682132502464 19.557260636106427 37 20.811166550896328 29.72529769058452 29.88390376731058 19.579631991208572 38 20.845321291510285 29.245082037552283 28.85063747688685 21.058959194050587 39 21.373951289362804 28.379942457800748 29.311427621194895 20.93467863164155 40 22.21646335345759 27.285624568529563 29.7371237695221 20.760788308490742 41 18.92394635827213 26.82961608790747 30.79954966974501 23.446887884075394 42 20.345765516605393 26.612861565286146 29.634488773977164 23.406884144131297 43 21.198566696310138 27.998818245974753 28.162291373238308 22.640323684476797 44 20.542027194858345 28.91070712694164 28.76644604127344 21.78081963692657 45 20.37560822121684 30.204403314546802 27.393681629146972 22.026306835089386 46 21.452848740181047 29.65912288064498 28.452393201328107 20.435635177845867 47 20.86141671302461 27.38714953500455 30.831783206199425 20.91965054577141 48 20.637788548854726 27.208178694187417 31.209705411092862 20.944327345864995 49 20.911154554043687 26.915472567125803 30.38798504534682 21.785387833483686 50 19.759414007115286 27.346206539693576 31.26443838292673 21.629941070264415 51 18.99080426302395 28.495214707372856 29.68520856378889 22.828772465814307 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1304.0 1 2862.5 2 4421.0 3 9305.0 4 14189.0 5 10351.0 6 6513.0 7 6471.0 8 6429.0 9 6777.0 10 7125.0 11 7686.0 12 8247.0 13 7727.5 14 7208.0 15 6950.5 16 6693.0 17 6631.5 18 6570.0 19 6926.5 20 7283.0 21 8474.0 22 9665.0 23 12444.0 24 15223.0 25 18892.0 26 27343.5 27 32126.0 28 40396.0 29 48666.0 30 52616.0 31 56566.0 32 66455.5 33 76345.0 34 83203.5 35 90062.0 36 96682.0 37 103302.0 38 112912.5 39 122523.0 40 135617.0 41 148711.0 42 160524.5 43 172338.0 44 177862.5 45 183387.0 46 193203.5 47 203020.0 48 204453.5 49 205887.0 50 197601.0 51 189315.0 52 163904.5 53 138494.0 54 127971.5 55 117449.0 56 107488.5 57 97528.0 58 89564.0 59 81600.0 60 69278.5 61 56957.0 62 48657.0 63 40357.0 64 32788.5 65 25220.0 66 18946.5 67 12673.0 68 9667.0 69 6661.0 70 5599.5 71 4538.0 72 3554.0 73 2570.0 74 2046.5 75 933.5 76 344.0 77 365.5 78 387.0 79 305.0 80 223.0 81 133.0 82 43.0 83 30.5 84 18.0 85 12.0 86 6.0 87 5.0 88 4.0 89 3.5 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2342281.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.426066910532699 #Duplication Level Percentage of deduplicated Percentage of total 1 75.07447453147282 11.581038673955826 2 10.444695722785946 3.222411501597014 3 3.852790403289228 1.7830020766019372 4 1.9560283524984086 1.2069529697815797 5 1.1465737133115963 0.884356140970131 6 0.7218300802875058 0.6680999469930153 7 0.4808151809551902 0.5191961007110256 8 0.37178664981498794 0.4588164589191035 9 0.2833954855997722 0.39345099507044917 >10 2.6837251288533506 9.494594075785882 >50 1.0655756599555395 12.0617185159815 >100 1.905707060650285 55.65401783712849 >500 0.0089614439291753 0.9613284433060643 >1k 0.0033605414734407374 0.7557830906232685 >5k 2.8004512278672814E-4 0.35523317257474346 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8223 0.3510680400857113 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.269342576744635E-5 0.0 0.0 0.08978427438893967 0.0 2 4.269342576744635E-5 0.0 0.0 0.31285742402384686 0.0 3 4.269342576744635E-5 0.0 0.0 0.45071449582693107 0.0 4 4.269342576744635E-5 0.0 0.0 0.6426641380773699 0.0 5 4.269342576744635E-5 0.0 0.0 1.0785640151629972 0.0 6 4.269342576744635E-5 0.0 0.0 1.4174217354792187 0.0 7 4.269342576744635E-5 0.0 0.0 1.6463865778700335 0.0 8 4.269342576744635E-5 0.0 0.0 2.163617431042646 0.0 9 4.269342576744635E-5 0.0 0.0 2.3155633333489876 0.0 10 4.269342576744635E-5 0.0 0.0 2.6466935436013013 0.0 11 4.269342576744635E-5 0.0 0.0 3.177116665336055 0.0 12 4.269342576744635E-5 0.0 0.0 3.5781360135696785 0.0 13 4.269342576744635E-5 0.0 0.0 3.7493366508971384 0.0 14 4.269342576744635E-5 0.0 0.0 3.8201650442453317 0.0 15 4.269342576744635E-5 0.0 0.0 3.939621249542647 0.0 16 4.269342576744635E-5 0.0 0.0 4.200691548110581 0.0 17 4.269342576744635E-5 0.0 0.0 4.486267873069029 0.0 18 4.269342576744635E-5 0.0 0.0 4.790330451384783 0.0 19 4.269342576744635E-5 0.0 0.0 5.000040558754479 0.0 20 4.269342576744635E-5 0.0 0.0 5.220253248862967 0.0 21 4.269342576744635E-5 0.0 0.0 5.495497764785694 0.0 22 4.269342576744635E-5 0.0 0.0 5.795291000524702 0.0 23 4.269342576744635E-5 0.0 0.0 6.090089105448919 0.0 24 4.269342576744635E-5 0.0 0.0 6.312137612865408 0.0 25 4.269342576744635E-5 0.0 0.0 6.518603019876778 0.0 26 4.269342576744635E-5 0.0 0.0 6.701629736141821 0.0 27 4.269342576744635E-5 0.0 0.0 6.907838982598586 0.0 28 4.269342576744635E-5 0.0 0.0 7.114475163313027 0.0 29 4.269342576744635E-5 0.0 0.0 7.345531983566446 0.0 30 4.269342576744635E-5 0.0 0.0 7.61146933267187 0.0 31 4.269342576744635E-5 0.0 0.0 7.855248793803988 0.0 32 4.269342576744635E-5 0.0 0.0 8.078065782884291 0.0 33 4.269342576744635E-5 0.0 0.0 8.296485349110547 0.0 34 4.269342576744635E-5 0.0 0.0 8.535910080814386 0.0 35 4.269342576744635E-5 0.0 0.0 8.802701298435158 0.0 36 4.269342576744635E-5 0.0 0.0 9.037344366453043 0.0 37 4.269342576744635E-5 0.0 0.0 9.296237300306837 0.0 38 4.269342576744635E-5 0.0 0.0 9.569219064663889 0.0 39 4.269342576744635E-5 0.0 0.0 9.976727813614165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGT 50 2.1827873E-11 45.000004 29 GTTTCGA 30 2.166471E-6 45.000004 43 TCGACGA 30 2.166471E-6 45.000004 32 TATCCGT 30 2.166471E-6 45.000004 33 TCGTTAC 20 7.034789E-4 45.0 41 GTCGACG 20 7.034789E-4 45.0 1 GCGCGTT 20 7.034789E-4 45.0 3 AGCCCGT 20 7.034789E-4 45.0 18 TAGCGTC 20 7.034789E-4 45.0 22 CCGGATA 20 7.034789E-4 45.0 39 CGCGATT 20 7.034789E-4 45.0 43 CCCGTAT 45 3.8562575E-10 45.0 33 TATCTCG 55 1.8189894E-12 45.0 20 CGCTATC 20 7.034789E-4 45.0 45 CGAATCG 20 7.034789E-4 45.0 15 CTCGCTA 40 6.8193913E-9 45.0 13 CGTCGGA 20 7.034789E-4 45.0 23 ACCGTCT 45 3.8562575E-10 45.0 30 ACGTACG 20 7.034789E-4 45.0 38 ATACGTA 35 1.2126475E-7 45.0 45 >>END_MODULE