SRR1547555_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547555_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2688999
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11312	0.4206769879795418	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTCG	25	3.8922037E-5	45.000004	35
GTCGCGA	20	7.034974E-4	45.000004	1
TAGGTCG	20	7.034974E-4	45.000004	32
ATTACGC	20	7.034974E-4	45.000004	39
CGTTACG	25	3.8922037E-5	45.000004	16
CCGTATC	25	3.8922037E-5	45.000004	22
TCGTCCG	25	3.8922037E-5	45.000004	1
ACGACGT	20	7.034974E-4	45.000004	22
GTCGGAC	25	3.8922037E-5	45.000004	12
GTCGACG	35	1.2127384E-7	45.0	14
TCCGATC	35	1.2127384E-7	45.0	34
GGCCGTA	35	1.2127384E-7	45.0	33
CGCTATT	35	1.2127384E-7	45.0	32
TTACCGA	60	0.0	44.999996	37
CGGTCTA	345	0.0	44.347824	31
CACGACG	385	0.0	42.66234	26
TTGCGCG	90	0.0	42.5	1
TATAGCG	175	0.0	42.42857	1
TACGGGA	1300	0.0	41.884617	4
TTTACGG	340	0.0	41.691177	2