##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547555_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2688999 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.404655040779115 31.0 31.0 33.0 30.0 34.0 2 31.834155758332376 31.0 31.0 34.0 30.0 34.0 3 31.98794346892654 33.0 31.0 34.0 30.0 34.0 4 35.698267645320804 37.0 35.0 37.0 33.0 37.0 5 35.583532756985036 37.0 35.0 37.0 33.0 37.0 6 35.62098535551705 37.0 35.0 37.0 33.0 37.0 7 35.99216139537426 37.0 35.0 37.0 35.0 37.0 8 35.95726179146961 37.0 35.0 37.0 35.0 37.0 9 37.635645085773554 39.0 37.0 39.0 35.0 39.0 10 37.14984683891664 39.0 37.0 39.0 33.0 39.0 11 36.838082498357196 39.0 37.0 39.0 32.0 39.0 12 36.456026945342856 39.0 35.0 39.0 32.0 39.0 13 36.30107783602746 39.0 35.0 39.0 32.0 39.0 14 37.348657251267106 40.0 35.0 41.0 32.0 41.0 15 37.57521032919685 40.0 35.0 41.0 32.0 41.0 16 37.64627841066508 40.0 35.0 41.0 33.0 41.0 17 37.56874621373976 40.0 35.0 41.0 32.0 41.0 18 37.49879973923382 39.0 36.0 41.0 32.0 41.0 19 37.50601580736921 39.0 36.0 41.0 32.0 41.0 20 37.41484247483915 39.0 35.0 41.0 32.0 41.0 21 37.28111092640793 39.0 35.0 41.0 32.0 41.0 22 37.2203277130263 39.0 35.0 41.0 32.0 41.0 23 37.158167407276835 39.0 35.0 41.0 32.0 41.0 24 37.117036860184776 39.0 35.0 41.0 32.0 41.0 25 37.04627298113536 39.0 35.0 41.0 32.0 41.0 26 37.05762292957342 39.0 35.0 41.0 32.0 41.0 27 37.0344012772039 39.0 35.0 41.0 32.0 41.0 28 36.99950762346881 39.0 35.0 41.0 31.0 41.0 29 36.962838959776484 39.0 35.0 41.0 31.0 41.0 30 36.866809545113256 39.0 35.0 41.0 31.0 41.0 31 36.778394859946026 39.0 35.0 41.0 31.0 41.0 32 36.692326772899506 39.0 35.0 41.0 31.0 41.0 33 36.60971870945285 39.0 35.0 41.0 30.0 41.0 34 36.54939514666982 39.0 35.0 41.0 30.0 41.0 35 36.455189830862714 39.0 35.0 41.0 30.0 41.0 36 36.41574950381164 39.0 35.0 41.0 30.0 41.0 37 36.37935343226234 39.0 35.0 41.0 30.0 41.0 38 36.27125632995773 39.0 35.0 41.0 30.0 41.0 39 36.2282016467838 39.0 35.0 41.0 30.0 41.0 40 36.13117781003265 38.0 35.0 41.0 30.0 41.0 41 36.08130014179998 38.0 35.0 41.0 29.0 41.0 42 36.071875073214976 38.0 35.0 41.0 29.0 41.0 43 36.057449258999355 38.0 35.0 41.0 29.0 41.0 44 35.96397618593387 38.0 35.0 40.0 29.0 41.0 45 35.8840419799338 38.0 35.0 40.0 29.0 41.0 46 35.85015130165537 38.0 35.0 40.0 29.0 41.0 47 35.786600515656566 38.0 35.0 40.0 29.0 41.0 48 35.69553726126339 38.0 35.0 40.0 28.0 41.0 49 35.63856066885856 38.0 34.0 40.0 28.0 41.0 50 35.53173876226804 38.0 34.0 40.0 28.0 41.0 51 35.11661514191712 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 3.0 11 6.0 12 7.0 13 14.0 14 26.0 15 60.0 16 157.0 17 375.0 18 793.0 19 1457.0 20 2604.0 21 4426.0 22 6725.0 23 10199.0 24 14644.0 25 21304.0 26 28547.0 27 34440.0 28 40678.0 29 48223.0 30 59212.0 31 72215.0 32 91760.0 33 118222.0 34 195868.0 35 268454.0 36 188241.0 37 250059.0 38 400620.0 39 829426.0 40 228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.03764672281395 22.95679544693025 31.801313425553523 13.20424440470227 2 30.338352673243836 26.40599717590077 29.812394872590136 13.443255278265257 3 29.18193721901719 26.500381740565913 31.198635626119607 13.11904541429729 4 26.812691265411402 27.80566299950279 31.057207533360927 14.32443820172488 5 24.69662502663631 31.780859717686766 29.65125684315985 13.871258412517074 6 23.10778099954667 40.67647477741717 25.486249715972377 10.72949450706378 7 89.2134954308276 3.3322437085324315 5.669135615148983 1.7851252454909803 8 89.456894554442 2.782633983872809 5.426740582648041 2.3337308790371436 9 84.30367582881213 5.646413405137005 6.965268488385455 3.0846422776654063 10 42.72850231628944 34.83880060944612 13.152961380796349 9.27973569346809 11 30.056798087317993 25.099525883051648 28.2334058138363 16.610270215794056 12 30.344079711446525 22.380409959245057 29.078887719928492 18.196622609379922 13 25.491530491457976 26.928496440497003 28.892201149944647 18.687771918100378 14 17.34783092146929 31.8665421593686 30.355310656493362 20.43031626266875 15 17.08676723196996 29.89685009179996 36.29733592314464 16.719046753085443 16 22.104842731440215 28.15527264978529 34.046870229405066 15.693014389369427 17 21.97858757106269 27.527195064036842 28.146533338242225 22.347684026658246 18 22.02395761396713 29.01674563657331 30.638575916168058 18.320720833291496 19 24.234334040287855 30.880785005870216 27.358024305698887 17.526856648143045 20 26.20376578793819 29.546496670322302 27.662375478756225 16.58736206298329 21 25.292013868357703 27.261222484649494 30.865649262048816 16.581114384943987 22 22.76865852311585 23.477918734815447 32.320391342652044 21.43303139941666 23 20.507854409763635 27.214141767996196 31.649621290301706 20.628382531938467 24 20.93816323472043 27.270705567387715 33.23158543383616 18.559545764055695 25 20.53451860710993 29.140471974887312 30.25222396884491 20.072785449157845 26 19.430427456462425 33.616338273089724 27.2706311902682 19.68260308017965 27 18.921725147536314 32.278368270125796 30.320241844641814 18.479664737696073 28 17.269958077336586 30.36338057396079 33.571935132738986 18.794726215963635 29 19.70272209100859 28.745083207543033 32.05865825907708 19.49353644237131 30 21.32563083883631 28.946533635750697 30.573235616673717 19.154599908739275 31 23.27323290190885 29.07461103555635 28.32128238054384 19.33087368199096 32 24.371448260114636 28.764086561579234 28.894060577932535 17.970404600373595 33 22.69662428286511 29.123328048838992 28.85661169825649 19.32343597003941 34 20.376430039579784 28.262970718843704 30.41592800889848 20.944671232678033 35 19.807073189688804 29.072677230448953 30.498263480202116 20.621986099660134 36 23.26486547596336 28.08427968920777 29.23861258408798 19.41224225074089 37 20.237010129048024 30.81715538012472 29.169776559976405 19.77605793085085 38 20.719345749105894 30.128348876291884 28.53649257586187 20.61581279874035 39 20.077954658964174 28.930170669457294 29.37122698818408 21.620647683394452 40 22.23712243849849 27.312988959832264 29.510275013118264 20.93961358855098 41 19.749468110624065 26.983238000460396 29.305663557331187 23.961630331584356 42 20.389892298212086 28.270073733757435 28.396998288210597 22.943035679819886 43 20.397999404239272 28.2706315621538 28.734298525213287 22.597070508393642 44 20.70019364083066 28.878627325633072 28.828162450041816 21.593016583494453 45 19.75281508100226 30.953823337234414 27.6005309038791 21.692830677884224 46 21.472079387162285 29.714849280345586 28.47435049250669 20.338720839985434 47 20.495656562163095 28.418493275750567 29.91369650937021 21.172153652716123 48 20.41547802732541 27.700419375388385 30.706816923323508 21.17728567396269 49 21.578698987987725 26.610050803291486 30.600346076737107 21.210904131983686 50 19.63868339110576 28.77873885412378 29.386102412087173 22.196475342683282 51 18.506440500721645 29.074871355474656 28.90001074749377 23.51867739630993 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1660.0 1 3115.0 2 4570.0 3 11540.5 4 18511.0 5 12838.5 6 7166.0 7 7352.5 8 7539.0 9 8040.0 10 8541.0 11 8661.5 12 8782.0 13 8956.5 14 9131.0 15 9533.0 16 9935.0 17 9708.0 18 9481.0 19 9415.5 20 9350.0 21 10152.5 22 10955.0 23 14058.5 24 17162.0 25 20418.5 26 30969.0 27 38263.0 28 44422.0 29 50581.0 30 61096.5 31 71612.0 32 82653.0 33 93694.0 34 96355.5 35 99017.0 36 109616.0 37 120215.0 38 133752.5 39 147290.0 40 164205.0 41 181120.0 42 199387.0 43 217654.0 44 225576.5 45 233499.0 46 232915.0 47 232331.0 48 233346.5 49 234362.0 50 219194.5 51 204027.0 52 178827.0 53 153627.0 54 138462.5 55 123298.0 56 112655.0 57 102012.0 58 95784.0 59 89556.0 60 75497.0 61 61438.0 62 52837.0 63 44236.0 64 33114.5 65 21993.0 66 16206.5 67 10420.0 68 8371.5 69 6323.0 70 4773.0 71 3223.0 72 2316.5 73 1410.0 74 1006.0 75 587.0 76 572.0 77 335.5 78 99.0 79 64.0 80 29.0 81 23.5 82 18.0 83 13.5 84 9.0 85 7.0 86 5.0 87 4.5 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2688999.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.922648866171382 #Duplication Level Percentage of deduplicated Percentage of total 1 74.44092485457035 12.597376325869442 2 10.79845354633685 3.654768753246433 3 4.103656436362784 2.0833421081991466 4 2.017988595634232 1.3659884967942566 5 1.1826214138030096 1.000654346370175 6 0.7787753746612199 0.7907365326607732 7 0.5297321764456097 0.6275130130571256 8 0.39758176002727713 0.538250921642882 9 0.3102370832135052 0.47250299020386066 >10 2.7800937873384854 10.681006567873952 >50 1.0474966581924685 12.958496329820063 >100 1.6026538307399725 51.327195399665456 >500 0.00689361279330078 0.76937957044777 >1k 0.002668495274826108 0.7070991503406016 >5k 0.0 0.0 >10k+ 2.2237460623550901E-4 0.42568949380803 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11312 0.4206769879795418 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1156567927321654E-4 0.0 0.0 0.07939757508277244 0.0 2 1.1156567927321654E-4 0.0 0.0 0.2920045712177654 0.0 3 1.1156567927321654E-4 0.0 0.0 0.43410205805208557 0.0 4 1.1156567927321654E-4 0.0 0.0 0.6314989332461634 0.0 5 1.1156567927321654E-4 0.0 0.0 1.1137973647442785 0.0 6 1.1156567927321654E-4 0.0 0.0 1.4983642611990557 0.0 7 1.1156567927321654E-4 0.0 0.0 1.7613989443655427 0.0 8 1.1156567927321654E-4 0.0 0.0 2.3764977227585433 0.0 9 1.1156567927321654E-4 0.0 0.0 2.5535896443248958 0.0 10 1.1156567927321654E-4 0.0 0.0 2.93655743271009 0.0 11 1.1156567927321654E-4 0.0 0.0 3.5618086879169533 0.0 12 1.1156567927321654E-4 0.0 0.0 4.019860178453023 0.0 13 1.1156567927321654E-4 0.0 0.0 4.192377907169173 0.0 14 1.1156567927321654E-4 0.0 0.0 4.271887047931219 0.0 15 1.1156567927321654E-4 0.0 0.0 4.394125843854907 0.0 16 1.1156567927321654E-4 0.0 0.0 4.675159789944139 0.0 17 1.1156567927321654E-4 0.0 0.0 5.028599861881689 0.0 18 1.1156567927321654E-4 0.0 0.0 5.394721232696628 0.0 19 1.1156567927321654E-4 0.0 0.0 5.658053424341177 0.0 20 1.487542390309554E-4 0.0 0.0 5.915956086261096 0.0 21 1.487542390309554E-4 0.0 0.0 6.23741399680699 0.0 22 1.487542390309554E-4 0.0 0.0 6.60056028284131 0.0 23 1.487542390309554E-4 0.0 0.0 6.963632191756115 0.0 24 1.487542390309554E-4 0.0 0.0 7.229418828344674 0.0 25 1.487542390309554E-4 0.0 0.0 7.458574733571861 0.0 26 1.487542390309554E-4 0.0 0.0 7.671925500902009 0.0 27 1.487542390309554E-4 0.0 0.0 7.911828899899182 0.0 28 1.487542390309554E-4 0.0 0.0 8.15887250236984 0.0 29 1.487542390309554E-4 0.0 0.0 8.42763422373902 0.0 30 1.487542390309554E-4 0.0 0.0 8.73667115532583 0.0 31 1.487542390309554E-4 0.0 0.0 9.029345120619235 0.0 32 1.487542390309554E-4 0.0 0.0 9.292379803785721 0.0 33 1.487542390309554E-4 0.0 0.0 9.565269455288009 0.0 34 1.487542390309554E-4 0.0 0.0 9.842472979722194 0.0 35 1.487542390309554E-4 0.0 0.0 10.139312063708465 0.0 36 1.487542390309554E-4 0.0 0.0 10.416775908060956 0.0 37 1.8594279878869424E-4 0.0 0.0 10.720234555684105 0.0 38 1.8594279878869424E-4 0.0 0.0 11.042622180223942 0.0 39 1.8594279878869424E-4 0.0 0.0 11.480034020094466 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCG 25 3.8922037E-5 45.000004 35 GTCGCGA 20 7.034974E-4 45.000004 1 TAGGTCG 20 7.034974E-4 45.000004 32 ATTACGC 20 7.034974E-4 45.000004 39 CGTTACG 25 3.8922037E-5 45.000004 16 CCGTATC 25 3.8922037E-5 45.000004 22 TCGTCCG 25 3.8922037E-5 45.000004 1 ACGACGT 20 7.034974E-4 45.000004 22 GTCGGAC 25 3.8922037E-5 45.000004 12 GTCGACG 35 1.2127384E-7 45.0 14 TCCGATC 35 1.2127384E-7 45.0 34 GGCCGTA 35 1.2127384E-7 45.0 33 CGCTATT 35 1.2127384E-7 45.0 32 TTACCGA 60 0.0 44.999996 37 CGGTCTA 345 0.0 44.347824 31 CACGACG 385 0.0 42.66234 26 TTGCGCG 90 0.0 42.5 1 TATAGCG 175 0.0 42.42857 1 TACGGGA 1300 0.0 41.884617 4 TTTACGG 340 0.0 41.691177 2 >>END_MODULE