##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547553_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2214534 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.397326480424326 31.0 31.0 33.0 30.0 34.0 2 31.821797272022014 31.0 31.0 34.0 30.0 34.0 3 31.973488779129152 33.0 31.0 34.0 30.0 34.0 4 35.69371389195199 37.0 35.0 37.0 33.0 37.0 5 35.585690262601524 37.0 35.0 37.0 33.0 37.0 6 35.62497030978075 37.0 35.0 37.0 33.0 37.0 7 35.96147767430981 37.0 35.0 37.0 35.0 37.0 8 35.90810391712207 37.0 35.0 37.0 35.0 37.0 9 37.56365266913942 39.0 37.0 39.0 35.0 39.0 10 37.14522152290279 39.0 37.0 39.0 33.0 39.0 11 36.88659103901769 39.0 37.0 39.0 33.0 39.0 12 36.432005108072396 39.0 35.0 39.0 32.0 39.0 13 36.22989712508365 39.0 35.0 39.0 32.0 39.0 14 37.18352619557884 39.0 35.0 41.0 31.0 41.0 15 37.45422693894065 40.0 35.0 41.0 32.0 41.0 16 37.54209057074762 40.0 35.0 41.0 32.0 41.0 17 37.48407610811123 39.0 35.0 41.0 32.0 41.0 18 37.414643893478264 39.0 36.0 41.0 32.0 41.0 19 37.43617302782437 39.0 36.0 41.0 32.0 41.0 20 37.33101185170334 39.0 35.0 41.0 32.0 41.0 21 37.200216840202046 39.0 35.0 41.0 32.0 41.0 22 37.141813582451206 39.0 35.0 41.0 32.0 41.0 23 37.07755491674546 39.0 35.0 41.0 32.0 41.0 24 37.00144183832806 39.0 35.0 41.0 32.0 41.0 25 36.91415485153987 39.0 35.0 41.0 31.0 41.0 26 36.94398324884603 39.0 35.0 41.0 31.0 41.0 27 36.91022761447781 39.0 35.0 41.0 31.0 41.0 28 36.863099415046236 39.0 35.0 41.0 31.0 41.0 29 36.841406363596136 39.0 35.0 41.0 31.0 41.0 30 36.754403861038035 39.0 35.0 41.0 31.0 41.0 31 36.62454358343561 39.0 35.0 41.0 31.0 41.0 32 36.540336251328725 39.0 35.0 41.0 30.0 41.0 33 36.455967259929174 39.0 35.0 41.0 30.0 41.0 34 36.4041811956827 39.0 35.0 41.0 30.0 41.0 35 36.318725293899305 39.0 35.0 41.0 30.0 41.0 36 36.23658972948711 38.0 35.0 41.0 30.0 41.0 37 36.193088929770326 38.0 35.0 41.0 30.0 41.0 38 36.07211584920349 38.0 35.0 41.0 30.0 41.0 39 36.031183084116115 38.0 35.0 41.0 29.0 41.0 40 35.93986364625695 38.0 35.0 41.0 29.0 41.0 41 35.84665125936201 38.0 35.0 40.0 29.0 41.0 42 35.82797690168677 38.0 35.0 40.0 29.0 41.0 43 35.83248304157895 38.0 35.0 40.0 29.0 41.0 44 35.74718247721643 38.0 35.0 40.0 29.0 41.0 45 35.668501364169614 38.0 34.0 40.0 28.0 41.0 46 35.63154279862039 38.0 34.0 40.0 28.0 41.0 47 35.56162831548308 38.0 34.0 40.0 28.0 41.0 48 35.46080620121434 38.0 34.0 40.0 28.0 41.0 49 35.38907147056672 38.0 34.0 40.0 28.0 41.0 50 35.29633999748931 37.0 34.0 40.0 27.0 41.0 51 34.86263475747042 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 11.0 12 5.0 13 7.0 14 23.0 15 59.0 16 132.0 17 400.0 18 761.0 19 1439.0 20 2577.0 21 4169.0 22 6387.0 23 8975.0 24 13130.0 25 18562.0 26 24715.0 27 30183.0 28 35109.0 29 40845.0 30 49924.0 31 61675.0 32 77420.0 33 101081.0 34 167028.0 35 224410.0 36 157262.0 37 209148.0 38 332473.0 39 646425.0 40 191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.47670435405372 24.147969730877918 29.43291907010685 12.942406844961512 2 31.660430591718168 25.31020070136652 29.460148274986974 13.569220431928342 3 30.123989968092612 25.067079575206343 30.530305698625536 14.278624758075514 4 28.247839048756983 27.74746289738609 28.747266919360914 15.257431134496017 5 24.242526870212874 30.948542673086077 28.571518883882568 16.23741157281848 6 23.682273561841903 39.920949509016346 25.57680306556594 10.819973863575813 7 87.08441595387562 4.230822376174852 6.331896462190239 2.352865207759285 8 86.94696039889205 3.761784646340946 6.250028222641873 3.0412267321251334 9 81.34334356573437 6.618186941361026 8.351734495835242 3.686734997069361 10 40.300939159209115 36.45538971178587 13.72812519473623 9.51554593426879 11 33.06135737812109 22.266716157891455 27.52610707263921 17.145819391348248 12 32.486925014472575 21.247314333399263 28.13395504426665 18.131805607861516 13 26.661997512795015 26.995205311817294 28.11882770822214 18.223969467165553 14 17.712078477910026 31.76379319531784 30.678824529223753 19.84530379754838 15 17.33841069949705 29.242856510669963 36.45909252239974 16.959640267433237 16 23.01527093284637 26.7278352917589 34.139055891668406 16.117837883726327 17 23.56035174894583 26.696542026448906 26.35583829374487 23.387267930860396 18 22.86011413687936 28.46716284328893 30.316355495106418 18.356367524725293 19 25.892445092285783 28.248742173296954 26.784054794372086 19.074757940045174 20 26.79213775900483 28.62137135848896 26.740027473048507 17.846463409457698 21 25.30825898360558 26.729189978568858 30.77184635684076 17.1907046809848 22 23.5892065779979 22.95083299691944 30.449024490028147 23.01093593505451 23 21.102724094549917 26.833907268978486 30.494903216658674 21.568465419812927 24 20.272075298911645 27.1225007157262 33.43466390671807 19.170760078644086 25 22.208329156382337 27.91201218856879 29.870618378403762 20.00904027664511 26 20.345409011557287 31.38339713908208 26.47446370207005 21.79673014729058 27 19.483105700793033 30.96240563477463 30.16752057091921 19.386968093513126 28 17.30513056019912 29.184017946890854 32.8712496624572 20.63960183045282 29 19.694707780508224 27.11839149906933 32.90651667574307 20.28038404467938 30 21.581696194323502 27.86852674196919 30.5656178681384 19.98415919556891 31 24.31233839715263 26.58550286425948 28.242781551333145 20.859377187254747 32 25.651762402383525 27.29201719187874 27.628656864152912 19.42756354158482 33 25.02386506596873 26.05676860233349 28.382359448985657 20.53700688271212 34 21.15840172243912 26.55407413026849 29.90484679846866 22.382677348823727 35 20.40962116634922 27.6631110653528 29.803200131494933 22.124067636803048 36 25.42629736097978 26.845783356679103 28.088482723679114 19.639436558662002 37 20.991233370090505 29.79606544762916 28.99160726365005 20.221093918630284 38 21.444376108020922 29.424203918296126 27.93991873685389 21.19150123682906 39 20.51515126884482 28.97246102340267 28.027476661004076 22.484911046748437 40 24.20333126517814 25.56077260498145 29.062818633626758 21.17307749621365 41 20.061376343736427 25.3698520772316 29.493112320695914 25.075659258336064 42 20.724269756075092 26.200907278912855 29.493202633149906 23.581620331862144 43 21.31360367463313 26.43201684869142 29.054780825221016 23.199598651454437 44 22.00002348123804 25.83563855872161 29.831964648093006 22.332373311947347 45 20.17566675426975 28.935749010852845 27.27404501353332 23.61453922134408 46 21.766746412563545 28.800957673262182 28.130613483468757 21.30168243070551 47 21.222929970820044 27.11604337526541 29.299708200461133 22.361318453453414 48 20.458028641691662 26.766218084707667 30.91201128544425 21.863741988156423 49 22.0540754849553 25.529659964579455 31.322120139045058 21.09414441142019 50 19.84304598619845 28.199205792279546 29.593901019356668 22.36384720216533 51 19.49136929033377 28.59197465471291 28.24892279820495 23.66773325674837 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1831.0 1 2958.0 2 4085.0 3 8869.0 4 13653.0 5 9864.0 6 6075.0 7 6083.0 8 6091.0 9 6593.5 10 7096.0 11 6961.5 12 6827.0 13 6757.5 14 6688.0 15 6283.0 16 5878.0 17 6063.5 18 6249.0 19 7073.0 20 7897.0 21 8527.0 22 9157.0 23 10821.0 24 12485.0 25 14212.0 26 21074.0 27 26209.0 28 31213.5 29 36218.0 30 41350.5 31 46483.0 32 51790.5 33 57098.0 34 67736.0 35 78374.0 36 84679.0 37 90984.0 38 96492.0 39 102000.0 40 115026.0 41 128052.0 42 146769.0 43 165486.0 44 172918.5 45 180351.0 46 186695.5 47 193040.0 48 196834.5 49 200629.0 50 189759.5 51 178890.0 52 161580.0 53 144270.0 54 128452.0 55 112634.0 56 107909.5 57 103185.0 58 94233.5 59 85282.0 60 73285.0 61 61288.0 62 53286.0 63 45284.0 64 36930.0 65 28576.0 66 22569.5 67 16563.0 68 13672.0 69 10781.0 70 8212.0 71 5643.0 72 4500.5 73 3358.0 74 2677.0 75 1508.5 76 1021.0 77 803.5 78 586.0 79 361.5 80 137.0 81 115.0 82 93.0 83 63.5 84 34.0 85 25.0 86 16.0 87 14.0 88 12.0 89 7.5 90 3.0 91 3.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2214534.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.79079654547442 #Duplication Level Percentage of deduplicated Percentage of total 1 75.84058759161762 12.734238761400832 2 9.98917151673556 3.354522931907098 3 3.7379394044246887 1.8828894011702033 4 1.8749427348590093 1.2592712798173207 5 1.0835417454039078 0.909676449780263 6 0.7242720027219411 0.7296662304772445 7 0.5125344417120645 0.6024103073334914 8 0.3975340763663435 0.5339931036928293 9 0.30778481526542323 0.4651156991617336 >10 2.7319263783485463 10.214670760198043 >50 1.0591684837905477 13.001059790030995 >100 1.7288948602289227 52.20799345748984 >500 0.008164150134071853 0.8807556013513101 >1k 0.0032656600536287413 0.8705201017558397 >5k 2.7213833780239516E-4 0.3532161244329768 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7730 0.3490576346987673 No Hit GGGAATGGTTACATCAGTGCGGCAGAACTGCGCCACGTCATGACAAACTTA 2512 0.11343244222034973 No Hit GGCTCTGGGCTCCTCTACAAAAACAAAAGTTAAAAAAAAACACACAAAAAG 2303 0.10399479077765346 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.515622699854687E-5 0.0 0.0 0.07310793151064739 0.0 2 4.515622699854687E-5 0.0 0.0 0.2859292293547988 0.0 3 4.515622699854687E-5 0.0 0.0 0.42406212774335367 0.0 4 4.515622699854687E-5 0.0 0.0 0.6548104477059282 0.0 5 4.515622699854687E-5 0.0 0.0 1.1291314560986645 0.0 6 4.515622699854687E-5 0.0 0.0 1.5392854659264659 0.0 7 4.515622699854687E-5 0.0 0.0 1.8067909546658574 0.0 8 4.515622699854687E-5 0.0 0.0 2.417980487091189 0.0 9 4.515622699854687E-5 0.0 0.0 2.597973207907397 0.0 10 4.515622699854687E-5 0.0 0.0 2.923368979658926 0.0 11 4.515622699854687E-5 0.0 0.0 3.511935242357986 0.0 12 4.515622699854687E-5 0.0 0.0 3.9862562507507224 0.0 13 4.515622699854687E-5 0.0 0.0 4.15974647487914 0.0 14 4.515622699854687E-5 0.0 0.0 4.238453778537607 0.0 15 4.515622699854687E-5 0.0 0.0 4.3629494963726 0.0 16 4.515622699854687E-5 0.0 0.0 4.642692322628598 0.0 17 4.515622699854687E-5 0.0 0.0 4.9555346632745305 0.0 18 4.515622699854687E-5 0.0 0.0 5.298225269966503 0.0 19 4.515622699854687E-5 0.0 0.0 5.535385774162871 0.0 20 4.515622699854687E-5 0.0 0.0 5.800317357963346 0.0 21 4.515622699854687E-5 0.0 0.0 6.110721262351357 0.0 22 4.515622699854687E-5 0.0 0.0 6.4600046781851175 0.0 23 4.515622699854687E-5 0.0 0.0 6.779710765334829 0.0 24 4.515622699854687E-5 0.0 0.0 7.018812987292135 0.0 25 4.515622699854687E-5 0.0 0.0 7.23371147157822 0.0 26 4.515622699854687E-5 0.0 0.0 7.448926049453293 0.0 27 4.515622699854687E-5 0.0 0.0 7.6822482743547855 0.0 28 4.515622699854687E-5 0.0 0.0 7.928981898674845 0.0 29 4.515622699854687E-5 0.0 0.0 8.204886445635967 0.0 30 4.515622699854687E-5 0.0 0.0 8.51583222474796 0.0 31 4.515622699854687E-5 0.0 0.0 8.800542235973799 0.0 32 4.515622699854687E-5 0.0 0.0 9.053913825662645 0.0 33 4.515622699854687E-5 0.0 0.0 9.308053071210466 0.0 34 4.515622699854687E-5 0.0 0.0 9.58233199399964 0.0 35 4.515622699854687E-5 0.0 0.0 9.880543717098044 0.0 36 4.515622699854687E-5 0.0 0.0 10.163673260378934 0.0 37 4.515622699854687E-5 0.0 0.0 10.459762640808405 0.0 38 4.515622699854687E-5 0.0 0.0 10.791344815658734 0.0 39 4.515622699854687E-5 0.0 0.0 11.385465294278616 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTATG 30 2.1664164E-6 45.000004 29 CGACGTA 35 1.2126111E-7 45.0 17 CGATTCG 35 1.2126111E-7 45.0 43 CCGTCGA 20 7.0347043E-4 45.0 44 CGTTAAC 35 1.2126111E-7 45.0 32 CGCCTAT 20 7.0347043E-4 45.0 45 GTCGGTA 45 3.8562575E-10 45.0 43 ATTACGA 50 2.1827873E-11 44.999996 34 CGACATA 25 3.891982E-5 44.999996 24 ATACGTC 25 3.891982E-5 44.999996 28 GCCGTCG 25 3.891982E-5 44.999996 39 TATAGCG 100 0.0 42.749996 1 TCACGAC 715 0.0 42.16783 25 CACGACG 715 0.0 42.16783 26 TAGGGAC 2065 0.0 41.186443 5 ACGGTCT 730 0.0 40.993153 30 CATTACG 55 6.184564E-11 40.909092 33 TCTCACG 730 0.0 40.684933 23 CTATGCG 150 0.0 40.500004 1 TGCGACA 50 1.0822987E-9 40.499996 30 >>END_MODULE