##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547551_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2026005 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.468590156490237 31.0 31.0 33.0 30.0 34.0 2 31.89629245732365 31.0 31.0 34.0 30.0 34.0 3 31.916890136006575 33.0 31.0 34.0 30.0 34.0 4 35.72342318997239 37.0 35.0 37.0 33.0 37.0 5 35.6710422728473 37.0 35.0 37.0 33.0 37.0 6 35.728285468199736 37.0 35.0 37.0 33.0 37.0 7 36.04842189431911 37.0 35.0 37.0 35.0 37.0 8 36.004022201327246 37.0 35.0 37.0 35.0 37.0 9 37.68265872986493 39.0 38.0 39.0 35.0 39.0 10 37.25111438520636 39.0 37.0 39.0 34.0 39.0 11 37.0538838749164 39.0 37.0 39.0 33.0 39.0 12 36.782582471415424 39.0 35.0 39.0 33.0 39.0 13 36.70151307622637 39.0 35.0 39.0 33.0 39.0 14 37.853601052317245 40.0 37.0 41.0 33.0 41.0 15 38.010226035967335 40.0 37.0 41.0 33.0 41.0 16 38.04160108193218 40.0 36.0 41.0 33.0 41.0 17 37.96870935659093 40.0 36.0 41.0 33.0 41.0 18 37.816310423715635 39.0 36.0 41.0 33.0 41.0 19 37.72819662340419 39.0 36.0 41.0 33.0 41.0 20 37.55456477155782 39.0 35.0 41.0 33.0 41.0 21 37.437612444194365 39.0 35.0 41.0 33.0 41.0 22 37.382539036182045 39.0 35.0 41.0 33.0 41.0 23 37.28551015421976 39.0 35.0 41.0 32.0 41.0 24 37.21513865957883 39.0 35.0 41.0 32.0 41.0 25 37.12768922090518 39.0 35.0 41.0 32.0 41.0 26 37.13420746740506 39.0 35.0 41.0 32.0 41.0 27 37.102302314160134 39.0 35.0 41.0 32.0 41.0 28 37.03977927004129 39.0 35.0 41.0 32.0 41.0 29 36.97424290660685 39.0 35.0 41.0 32.0 41.0 30 36.86070271297455 39.0 35.0 41.0 31.0 41.0 31 36.687073822621365 39.0 35.0 41.0 31.0 41.0 32 36.44271805844507 39.0 35.0 41.0 30.0 41.0 33 36.19160219249212 39.0 35.0 41.0 30.0 41.0 34 35.98568759701975 39.0 35.0 41.0 29.0 41.0 35 35.78374485749048 39.0 35.0 41.0 27.0 41.0 36 35.70202492096515 39.0 35.0 41.0 27.0 41.0 37 35.64929800271964 39.0 35.0 41.0 26.0 41.0 38 35.52415961461102 39.0 35.0 41.0 26.0 41.0 39 35.44444559613624 38.0 35.0 41.0 25.0 41.0 40 35.371413693450904 38.0 35.0 41.0 25.0 41.0 41 35.30319026853339 38.0 35.0 41.0 24.0 41.0 42 35.27057485050629 38.0 35.0 41.0 24.0 41.0 43 35.21562928028312 38.0 35.0 40.0 24.0 41.0 44 35.09809847458422 38.0 34.0 40.0 24.0 41.0 45 35.029763993672276 38.0 34.0 40.0 24.0 41.0 46 34.979490178948225 38.0 34.0 40.0 24.0 41.0 47 34.929705504181875 38.0 34.0 40.0 23.0 41.0 48 34.83776989691536 38.0 34.0 40.0 23.0 41.0 49 34.759744423138144 38.0 34.0 40.0 24.0 41.0 50 34.66929745977922 38.0 34.0 40.0 24.0 41.0 51 34.26228612466406 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 7.0 12 3.0 13 12.0 14 21.0 15 49.0 16 143.0 17 320.0 18 646.0 19 1356.0 20 2425.0 21 3896.0 22 6166.0 23 9842.0 24 15471.0 25 24575.0 26 34276.0 27 37686.0 28 37683.0 29 38598.0 30 42786.0 31 51676.0 32 63577.0 33 82150.0 34 129039.0 35 178120.0 36 153084.0 37 196984.0 38 304670.0 39 610532.0 40 206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.22080399604147 23.888292477066937 28.89746076638508 16.993442760506515 2 34.52755546012967 24.176100256415953 28.72628646029995 12.570057823154436 3 27.621106561928528 24.24554727160101 35.22686271751551 12.906483448954964 4 25.730439954491725 26.310892618725028 34.00939286921799 13.949274557565259 5 23.04283553100807 30.08077472661716 32.65011685558525 14.22627288678952 6 21.121320036228934 39.47063309320559 29.23127040653898 10.176776464026496 7 83.88868734282492 3.3748189170313005 10.777910222334102 1.9585835178096798 8 84.12486642431782 2.834790634771385 10.668285616274392 2.372057324636415 9 78.98327003141651 5.561733559393979 12.367541047529498 3.0874553616600156 10 35.03007149538131 36.7241443135629 18.426854820200344 9.818929370855452 11 27.1824107048107 23.29372336198578 32.18629766461583 17.337568268587688 12 26.47964837204252 21.839531491778157 33.90914632491035 17.771673811268975 13 23.403051818727004 24.641400193977802 34.32568034136145 17.629867645933746 14 17.92749771101256 29.283886268790056 33.65608673226374 19.132529287933643 15 16.611113990340595 28.595684610847456 37.924980441805424 16.86822095700652 16 21.044518646301466 26.223331136892554 36.4632367639764 16.268913452829583 17 20.89027420958981 26.42061594122423 31.836150453725438 20.852959395460523 18 20.682525462671613 27.264888290009154 34.309244054185456 17.743342193133778 19 22.360951725193175 28.053780716237124 31.528155162499598 18.0571123960701 20 23.378125917754396 28.11542913270204 31.32563838687466 17.1808065626689 21 23.180298173005497 26.506055019607555 33.497103906456296 16.81654290093065 22 21.58731098886725 23.5140090967199 34.077161704931626 20.821518209481223 23 18.727594453123263 26.85812720106811 34.00894864524026 20.40532970056836 24 18.557111162114605 26.736261756510967 35.68505507143369 19.021572009940748 25 19.77255732340246 28.061233807419033 32.5859511699132 19.580257699265303 26 18.974533626521158 30.965767606693962 30.19123842241258 19.8684603443723 27 17.99334157615603 29.876431696861555 33.59764660008243 18.532580126899983 28 17.380707352647203 28.268883837897736 35.73702927682804 18.613379532627018 29 18.32038914020449 26.76780165892977 35.211462952954214 19.70034624791153 30 19.260613868179004 27.705262326598408 33.889106887692776 19.14501691752982 31 21.036670689361575 28.024758083025464 31.650909055012207 19.287662172600758 32 21.400934351099824 28.10047359211848 32.100315645815286 18.39827641096641 33 20.84047176586435 28.366267605460006 31.19409873124696 19.599161897428683 34 19.037712147798253 27.66641740765694 32.46260497876363 20.83326546578118 35 19.09560933956234 27.645193373165416 31.827216615951098 21.431980671321146 36 21.003403249251605 28.417846945096386 30.631859250100568 19.94689055555144 37 18.87428708221352 29.905108822534988 31.217691960286377 20.00291213496512 38 19.645706698650795 29.633145031724993 29.78181198960516 20.939336280019052 39 19.5846999390426 28.629396274935154 30.526923674916894 21.258980111105352 40 20.15350406341544 27.89608120414313 31.410633241280255 20.539781491161175 41 18.018514268227374 27.868095093546163 31.700316632979682 22.413074005246777 42 19.676259436674638 28.867500326998208 30.097902028869623 21.358338207457532 43 19.670681957843144 28.58043292094541 30.496173504014056 21.252711617197388 44 19.459132628004372 29.106344752357472 30.513448880925765 20.921073738712394 45 19.196201391408216 29.64997618465897 29.32608754667437 21.827734877258447 46 20.22487604917066 29.60979859378432 29.4841325663066 20.68119279073842 47 19.50913250460882 28.818685047667703 30.87494848235814 20.797233965365336 48 19.13998237911555 28.243118847189418 31.458214565117064 21.158684208577967 49 19.478629124804726 27.908322042640567 31.333190194496062 21.279858638058645 50 18.58159283910948 28.183839625272395 31.8695166102749 21.365050925343223 51 18.337911308214935 28.566908768734528 30.711424700333907 22.38375522271663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1809.0 1 2680.5 2 3552.0 3 21848.0 4 40144.0 5 27960.0 6 15776.0 7 15711.5 8 15647.0 9 16223.0 10 16799.0 11 17323.5 12 17848.0 13 17792.0 14 17736.0 15 16662.5 16 15589.0 17 14703.5 18 13818.0 19 14018.0 20 14218.0 21 14646.5 22 15075.0 23 15254.5 24 15434.0 25 19277.0 26 26508.0 27 29896.0 28 34175.5 29 38455.0 30 45974.5 31 53494.0 32 57611.5 33 61729.0 34 68263.0 35 74797.0 36 81369.5 37 87942.0 38 94526.5 39 101111.0 40 112525.5 41 123940.0 42 136409.0 43 148878.0 44 155633.5 45 162389.0 46 165679.0 47 168969.0 48 164334.5 49 159700.0 50 143074.0 51 126448.0 52 115429.5 53 104411.0 54 95363.0 55 86315.0 56 78936.5 57 71558.0 58 66157.0 59 60756.0 60 53631.5 61 46507.0 62 40577.0 63 34647.0 64 28407.0 65 22167.0 66 17703.5 67 13240.0 68 11267.0 69 9294.0 70 7361.5 71 5429.0 72 4440.0 73 3451.0 74 2645.0 75 1469.5 76 1100.0 77 870.5 78 641.0 79 386.5 80 132.0 81 136.5 82 141.0 83 86.0 84 31.0 85 23.0 86 15.0 87 10.5 88 6.0 89 6.0 90 6.0 91 3.0 92 0.0 93 0.5 94 1.0 95 1.5 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2026005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.4861522773845 #Duplication Level Percentage of deduplicated Percentage of total 1 76.59933125412967 18.756228894344368 2 8.7097393083715 4.265360060022123 3 3.147104135405946 2.311814132770095 4 1.673380956461475 1.6389864367196398 5 1.0959250725120884 1.3417494105067325 6 0.7217309882091694 1.060344892835815 7 0.5653264837087958 0.9689869256572331 8 0.4503826158716225 0.8822509852255455 9 0.36744850143291286 0.8097659964164736 >10 4.989040748393145 29.931679792246445 >50 1.2292920136281549 20.544053120854965 >100 0.44476033733138404 14.781371411309829 >500 0.004085990340048931 0.6730875971873483 >1k 0.0022472946870269123 0.742972649084095 >5k 0.0 0.0 >10k+ 2.042995170024466E-4 1.2913476948193394 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25814 1.2741330845679057 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.871643949546028E-5 0.0 0.0 0.10074012650511721 0.0 2 9.871643949546028E-5 0.0 0.0 0.2985185130342719 0.0 3 9.871643949546028E-5 0.0 0.0 0.4613512799820336 0.0 4 9.871643949546028E-5 0.0 0.0 0.6552303671511176 0.0 5 9.871643949546028E-5 0.0 0.0 1.069592621933312 0.0 6 9.871643949546028E-5 0.0 0.0 1.636817283274227 0.0 7 9.871643949546028E-5 0.0 0.0 1.9877542256805882 0.0 8 9.871643949546028E-5 0.0 0.0 2.7353831801994564 0.0 9 9.871643949546028E-5 0.0 0.0 3.064405073037826 0.0 10 9.871643949546028E-5 0.0 0.0 3.555470001307993 0.0 11 9.871643949546028E-5 0.0 0.0 4.152753818475275 0.0 12 9.871643949546028E-5 0.0 0.0 4.604332170947258 0.0 13 9.871643949546028E-5 0.0 0.0 4.8212615467385325 0.0 14 9.871643949546028E-5 0.0 0.0 4.929800271963791 0.0 15 9.871643949546028E-5 0.0 0.0 5.057292553572178 0.0 16 9.871643949546028E-5 0.0 0.0 5.3142514455788605 0.0 17 9.871643949546028E-5 0.0 0.0 5.632266455413486 0.0 18 9.871643949546028E-5 0.0 0.0 5.987892428695882 0.0 19 9.871643949546028E-5 0.0 0.0 6.225354823902212 0.0 20 9.871643949546028E-5 0.0 0.0 6.467703682863567 0.0 21 1.480746592431904E-4 0.0 0.0 6.7573870745629945 0.0 22 1.480746592431904E-4 0.0 0.0 7.087297415356823 0.0 23 1.480746592431904E-4 0.0 0.0 7.447069479098028 0.0 24 1.480746592431904E-4 0.0 0.0 7.717799314414328 0.0 25 1.480746592431904E-4 4.935821974773014E-5 0.0 7.950128454766894 0.0 26 1.480746592431904E-4 4.935821974773014E-5 0.0 8.171055846357733 0.0 27 1.480746592431904E-4 4.935821974773014E-5 0.0 8.400226060646444 0.0 28 1.480746592431904E-4 4.935821974773014E-5 0.0 8.64583256211115 0.0 29 1.480746592431904E-4 4.935821974773014E-5 0.0 8.918141860459377 0.0 30 1.480746592431904E-4 4.935821974773014E-5 0.0 9.226285226344457 0.0 31 1.480746592431904E-4 4.935821974773014E-5 0.0 9.501358584998556 0.0 32 1.480746592431904E-4 4.935821974773014E-5 0.0 9.762315492804806 0.0 33 1.480746592431904E-4 4.935821974773014E-5 0.0 10.031564581528674 0.0 34 1.480746592431904E-4 4.935821974773014E-5 0.0 10.304466178513874 0.0 35 1.480746592431904E-4 4.935821974773014E-5 0.0 10.612806977277943 0.0 36 1.480746592431904E-4 4.935821974773014E-5 0.0 10.894543695597987 0.0 37 1.480746592431904E-4 4.935821974773014E-5 0.0 11.186349490746569 0.0 38 1.480746592431904E-4 4.935821974773014E-5 0.0 11.491679438106026 0.0 39 1.480746592431904E-4 4.935821974773014E-5 0.0 11.862409026631228 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACTA 20 7.034564E-4 45.0 36 CGTTTTT 13865 0.0 43.37721 1 CGACGGT 490 0.0 41.785713 28 CCGAACG 65 0.0 41.538464 36 TCACGAC 500 0.0 40.949997 25 CGACGTT 155 0.0 40.64516 27 CGGTCTA 505 0.0 40.544556 31 TAATGCG 50 1.0822987E-9 40.5 1 TCTCACG 510 0.0 40.14706 23 ACGGTCT 510 0.0 40.14706 30 TAGGGAT 3315 0.0 40.113125 5 GTCGTTA 45 1.929584E-8 40.0 36 AGTACGG 215 0.0 39.76744 2 CACGACG 510 0.0 39.705883 26 ATAGGGA 3095 0.0 39.47496 4 GACGGTC 520 0.0 39.375004 29 TACGGGA 950 0.0 39.31579 4 ACGACGG 525 0.0 38.999996 27 TACCCGT 35 6.2506497E-6 38.571426 27 CGAACGT 70 0.0 38.571426 37 >>END_MODULE