##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547550_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3204976 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37069357149632 31.0 31.0 33.0 30.0 34.0 2 31.777456679862812 31.0 31.0 34.0 30.0 34.0 3 31.846280284158134 31.0 31.0 34.0 30.0 34.0 4 35.63920322648282 37.0 35.0 37.0 33.0 37.0 5 35.567262594166074 37.0 35.0 37.0 33.0 37.0 6 35.613749993759704 37.0 35.0 37.0 33.0 37.0 7 35.95802152652625 37.0 35.0 37.0 35.0 37.0 8 35.892348959867405 37.0 35.0 37.0 35.0 37.0 9 37.507060271278164 39.0 37.0 39.0 35.0 39.0 10 37.110530936893134 39.0 37.0 39.0 33.0 39.0 11 36.90142640693721 39.0 37.0 39.0 32.0 39.0 12 36.56032962493323 39.0 35.0 39.0 32.0 39.0 13 36.45039775648866 39.0 35.0 39.0 32.0 39.0 14 37.509656234555266 40.0 36.0 41.0 32.0 41.0 15 37.660819613001784 40.0 36.0 41.0 32.0 41.0 16 37.695973074369356 40.0 36.0 41.0 33.0 41.0 17 37.6020675349831 40.0 36.0 41.0 32.0 41.0 18 37.48924516127422 39.0 36.0 41.0 32.0 41.0 19 37.452970318654494 39.0 36.0 41.0 32.0 41.0 20 37.309205123532905 39.0 35.0 41.0 32.0 41.0 21 37.20396283778724 39.0 35.0 41.0 32.0 41.0 22 37.14853278152473 39.0 35.0 41.0 32.0 41.0 23 37.06904451078573 39.0 35.0 41.0 32.0 41.0 24 37.009645314036675 39.0 35.0 41.0 32.0 41.0 25 36.91576411180614 39.0 35.0 41.0 31.0 41.0 26 36.91591200682938 39.0 35.0 41.0 31.0 41.0 27 36.88120503866487 39.0 35.0 41.0 31.0 41.0 28 36.80275827338489 39.0 35.0 41.0 31.0 41.0 29 36.73406883546086 39.0 35.0 41.0 31.0 41.0 30 36.589568221415696 38.0 35.0 41.0 31.0 41.0 31 36.438894082202175 38.0 35.0 41.0 30.0 41.0 32 36.245260494930385 38.0 35.0 41.0 30.0 41.0 33 36.039245535692 38.0 35.0 41.0 29.0 41.0 34 35.84199008042494 38.0 35.0 41.0 28.0 41.0 35 35.68790873941022 38.0 35.0 41.0 27.0 41.0 36 35.646697510371375 38.0 35.0 41.0 27.0 41.0 37 35.58883436256621 38.0 35.0 41.0 27.0 41.0 38 35.45858627334495 38.0 34.0 41.0 26.0 41.0 39 35.38649150570863 38.0 34.0 40.0 26.0 41.0 40 35.299258715197865 38.0 34.0 40.0 25.0 41.0 41 35.23835966322369 38.0 34.0 40.0 25.0 41.0 42 35.24901684131176 38.0 34.0 40.0 25.0 41.0 43 35.22329246771271 38.0 34.0 40.0 25.0 41.0 44 35.10074272007029 38.0 34.0 40.0 25.0 41.0 45 35.02572187748052 38.0 34.0 40.0 24.0 41.0 46 34.98227131810035 38.0 34.0 40.0 24.0 41.0 47 34.926922697705066 38.0 34.0 40.0 24.0 41.0 48 34.81509159506967 38.0 34.0 40.0 24.0 41.0 49 34.73016428204143 37.0 34.0 40.0 24.0 41.0 50 34.642278132503954 37.0 34.0 40.0 24.0 41.0 51 34.241482931541455 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 9.0 11 10.0 12 13.0 13 24.0 14 41.0 15 88.0 16 270.0 17 531.0 18 1299.0 19 2563.0 20 4491.0 21 7275.0 22 11029.0 23 16613.0 24 24367.0 25 36510.0 26 49902.0 27 58854.0 28 62536.0 29 67656.0 30 76954.0 31 91447.0 32 111565.0 33 141753.0 34 223535.0 35 281436.0 36 237534.0 37 309515.0 38 477257.0 39 909543.0 40 354.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.898631378206886 22.96934516826335 27.60803825052044 15.523985203009321 2 34.63398789881734 24.688671615637684 27.38722536455811 13.290115120986865 3 29.940692223592315 24.280899451353147 32.4749389699018 13.303469355152739 4 27.446008956073303 26.548841551387593 30.979514355177702 15.025635137361403 5 23.554560158952828 30.88450584341349 30.378792228085327 15.182141769548352 6 22.16550139533026 39.361667606871315 27.863671990055465 10.60915900774296 7 84.03810200138784 4.01903165577527 9.596140501520138 2.3467258413167524 8 83.57500961005636 3.9877989725976106 9.59055543629656 2.8466359810494684 9 77.30438543065533 7.134811617934113 11.744580926659046 3.8162220247515117 10 36.727482514689655 36.519056616960626 16.590639056267502 10.162821812082212 11 29.973141764556114 22.706098267194513 30.124905771525277 17.195854196724095 12 29.91105081598115 20.40502019359895 31.777367443625167 17.906561546794734 13 25.281811782677938 23.252030592428774 31.90588634673083 19.560271278162457 14 18.598548007847796 26.74678375126678 33.72883291481746 20.925835326067965 15 18.713619072342507 28.06654402404261 36.04875668335738 17.1710802202575 16 24.383645930577952 26.09305030677297 33.21946872613087 16.303835036518212 17 23.013744876716704 26.46631363230177 30.56674995382181 19.953191537159718 18 22.481447598983582 27.602421983815166 31.777149033253295 18.13898138394796 19 23.843080260195396 28.75129174134221 29.425337350420094 17.980290648042292 20 24.910451747532587 28.363769338678356 29.528520650388646 17.19725826340041 21 24.395533695104113 27.238300692423284 31.70245268607316 16.663712926399448 22 22.5075632391631 23.773469754531703 32.81528473224136 20.903682274063833 23 21.368334739480108 25.92331424634693 32.965738276979295 19.742612737193664 24 21.338287712606895 26.41554882158244 32.88526965568541 19.360893810125255 25 21.696293513586372 27.685511529571517 29.960099545207203 20.658095411634907 26 19.83783965932974 29.30234110957461 29.685713715172906 21.17410551592274 27 19.520801403817064 28.627203448637367 31.815121236477278 20.03687391106829 28 18.570685084693302 28.807610415803424 32.42270768954276 20.198996809960512 29 20.762183554572637 27.267536480772396 31.797617205245842 20.172662759409118 30 22.16409732865394 26.464909565625454 31.60560328688889 19.765389818831718 31 24.07453285141605 26.400509707404986 29.45563398914688 20.06932345203209 32 24.7009025964625 26.986629541063646 28.99566174598499 19.31680611648886 33 23.732720619436776 27.665043357578966 29.00265087788489 19.599585145099372 34 21.03747422757612 27.36497870810889 31.724574536595597 19.872972527719394 35 21.34758575415229 28.239899456345384 29.840597870311665 20.57191691919066 36 22.59243126937612 29.966464647473178 28.580370024611728 18.860734058538974 37 22.020164893590465 30.23763672489279 28.441305020692827 19.300893360823917 38 21.838073046412827 29.975388271238224 28.181583887055627 20.00495479529332 39 22.130212519532126 28.517717449366238 28.182239118171243 21.169830912930394 40 22.008401934991088 27.126880201287 29.95941311260989 20.905304751112023 41 19.18981608598629 27.632500212170076 30.035763138319915 23.141920563523723 42 19.72092770741497 28.387950486992725 29.404744372500762 22.48637743309154 43 21.20973760801953 26.908189016079998 29.10009310522138 22.781980270679096 44 20.923526416422465 27.988571521284406 28.809076885443137 22.27882517685 45 21.02826979047581 28.115842365122234 28.35731063196729 22.498577212434665 46 21.093418484256983 29.038626186280336 28.197902261982616 21.67005306748007 47 20.877909850182967 27.160827413372207 30.424377592843125 21.5368851436017 48 20.70268232897844 27.120234285685758 30.809060660672653 21.36802272466315 49 21.67120752230282 26.751994398710004 30.09829090763862 21.478507171348554 50 19.493749719186663 27.128377872408404 30.742383094288385 22.63548931411655 51 19.20273349940842 26.72640918371932 30.722507750448052 23.348349566424208 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2131.0 1 3978.0 2 5825.0 3 30493.0 4 55161.0 5 38405.0 6 21649.0 7 20792.5 8 19936.0 9 20143.5 10 20351.0 11 20198.5 12 20046.0 13 19593.5 14 19141.0 15 18242.0 16 17343.0 17 17262.5 18 17182.0 19 16983.0 20 16784.0 21 17654.0 22 18524.0 23 19373.0 24 20222.0 25 25483.0 26 36237.0 27 41730.0 28 50618.0 29 59506.0 30 68214.0 31 76922.0 32 85399.5 33 93877.0 34 104355.0 35 114833.0 36 118066.5 37 121300.0 38 130031.0 39 138762.0 40 152149.5 41 165537.0 42 178232.5 43 190928.0 44 198752.0 45 206576.0 46 221432.0 47 236288.0 48 244277.0 49 252266.0 50 241013.0 51 229760.0 52 213777.0 53 197794.0 54 185060.5 55 172327.0 56 165335.0 57 158343.0 58 149672.0 59 141001.0 60 127597.0 61 114193.0 62 97752.0 63 81311.0 64 66869.0 65 52427.0 66 41483.5 67 30540.0 68 24141.5 69 17743.0 70 14151.0 71 10559.0 72 9088.5 73 7618.0 74 5609.0 75 2800.0 76 2000.0 77 1622.5 78 1245.0 79 918.5 80 592.0 81 395.5 82 199.0 83 144.5 84 90.0 85 59.0 86 28.0 87 24.5 88 21.0 89 13.5 90 6.0 91 6.5 92 7.0 93 6.5 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3204976.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.784770422952057 #Duplication Level Percentage of deduplicated Percentage of total 1 76.86300367766836 15.975798854588566 2 8.62429221965292 3.5850786769187506 3 3.164581510139635 1.973253005189137 4 1.62308434491398 1.3494174194449844 5 1.0163043024838783 1.0561825803492917 6 0.7029693205813168 0.8766633565596753 7 0.5470442147345737 0.7959131890123541 8 0.40738011376044325 0.6773841711509524 9 0.31475428342912415 0.5887885968643615 >10 4.252733271615308 21.763248956239163 >50 1.663256272544876 24.556297124319666 >100 0.8114710011852263 23.665799951696563 >500 0.005019007009749237 0.7100008132607906 >1k 0.003954369159196369 1.3693595382382426 >5k 0.0 0.0 >10k+ 1.5209112150755264E-4 1.0568137661674752 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33431 1.0430967345777316 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1201481695962775E-5 0.0 0.0 0.08705213393173615 0.0 2 3.1201481695962775E-5 0.0 0.0 0.2461796905811463 0.0 3 3.1201481695962775E-5 0.0 0.0 0.3798780396483468 0.0 4 3.1201481695962775E-5 0.0 0.0 0.5416889237236098 0.0 5 3.1201481695962775E-5 0.0 0.0 0.9305217886186979 0.0 6 3.1201481695962775E-5 0.0 0.0 1.4289654587117033 0.0 7 3.1201481695962775E-5 0.0 0.0 1.7558009794769134 0.0 8 3.1201481695962775E-5 0.0 0.0 2.4431384197572776 0.0 9 3.1201481695962775E-5 0.0 0.0 2.8027042948215524 0.0 10 3.1201481695962775E-5 0.0 0.0 3.30267683751766 0.0 11 3.1201481695962775E-5 0.0 0.0 3.8454890145823244 0.0 12 3.1201481695962775E-5 0.0 0.0 4.278846393857552 0.0 13 3.1201481695962775E-5 0.0 0.0 4.474448482609542 0.0 14 3.1201481695962775E-5 0.0 0.0 4.583466459655236 0.0 15 3.1201481695962775E-5 0.0 0.0 4.708428393847567 0.0 16 3.1201481695962775E-5 0.0 0.0 4.921815327166256 0.0 17 3.1201481695962775E-5 0.0 0.0 5.175888992616481 0.0 18 3.1201481695962775E-5 0.0 0.0 5.4713670242772485 0.0 19 3.1201481695962775E-5 0.0 0.0 5.674301461227791 0.0 20 3.1201481695962775E-5 0.0 0.0 5.899607360554338 0.0 21 3.1201481695962775E-5 0.0 0.0 6.146317476324316 0.0 22 3.1201481695962775E-5 0.0 0.0 6.436460054615074 0.0 23 3.1201481695962775E-5 0.0 0.0 6.717023778025171 0.0 24 3.1201481695962775E-5 0.0 0.0 6.936619806201357 0.0 25 3.1201481695962775E-5 0.0 0.0 7.1381813779572765 0.0 26 3.1201481695962775E-5 0.0 0.0 7.333783466709267 0.0 27 6.240296339192555E-5 0.0 0.0 7.539588439975837 0.0 28 6.240296339192555E-5 0.0 0.0 7.763739884479635 0.0 29 6.240296339192555E-5 0.0 0.0 8.010637209139787 0.0 30 6.240296339192555E-5 0.0 0.0 8.296005960731064 0.0 31 6.240296339192555E-5 0.0 0.0 8.55160849878439 0.0 32 6.240296339192555E-5 0.0 0.0 8.793669593781669 0.0 33 6.240296339192555E-5 0.0 0.0 9.037072352491876 0.0 34 6.240296339192555E-5 0.0 0.0 9.287027422358232 0.0 35 6.240296339192555E-5 0.0 0.0 9.559135544228724 0.0 36 6.240296339192555E-5 0.0 0.0 9.824816160869847 0.0 37 6.240296339192555E-5 0.0 0.0 10.104693451682634 0.0 38 6.240296339192555E-5 0.0 0.0 10.439173335463355 0.0 39 6.240296339192555E-5 0.0 0.0 10.881173525168363 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGC 35 1.2128294E-7 45.000004 31 CGCGAAA 20 7.035177E-4 45.0 33 CGTTTTT 16805 0.0 43.152336 1 CGACGGT 625 0.0 40.68 28 TACGGGA 1155 0.0 40.51948 4 CGGTCTA 625 0.0 40.32 31 TAACGCG 95 0.0 40.263157 1 TCGATTG 45 1.9301297E-8 40.0 1 TCACGAC 650 0.0 39.807693 25 ACGGGTC 160 0.0 39.375 5 TCGCGCA 160 0.0 39.375 34 TAAGGGA 4025 0.0 39.186333 4 TAGGGAT 4755 0.0 39.037853 5 TAGGGAC 3650 0.0 38.9589 5 CATACGA 880 0.0 38.863636 18 ACGGGAG 1350 0.0 38.833332 5 CACGACG 650 0.0 38.76923 26 TAAGTCG 35 6.2517865E-6 38.57143 1 GCGCGAC 470 0.0 38.29787 9 GGGCGAT 2070 0.0 38.260868 7 >>END_MODULE