##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547549_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3426163 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.481119549770398 31.0 31.0 33.0 30.0 34.0 2 31.911130030882944 31.0 31.0 34.0 30.0 34.0 3 32.04257824277479 33.0 31.0 34.0 30.0 34.0 4 35.765356172488 37.0 35.0 37.0 35.0 37.0 5 35.69105964894256 37.0 35.0 37.0 33.0 37.0 6 35.72830335275934 37.0 35.0 37.0 33.0 37.0 7 36.029154479807296 37.0 35.0 37.0 35.0 37.0 8 35.97797769691635 37.0 35.0 37.0 35.0 37.0 9 37.62465737911477 39.0 38.0 39.0 35.0 39.0 10 37.23398448935442 39.0 37.0 39.0 34.0 39.0 11 37.019752708788225 39.0 37.0 39.0 33.0 39.0 12 36.66126772135476 39.0 35.0 39.0 33.0 39.0 13 36.52231111012523 39.0 35.0 39.0 32.0 39.0 14 37.547799973322924 40.0 36.0 41.0 32.0 41.0 15 37.762045179987055 40.0 36.0 41.0 33.0 41.0 16 37.832238279381336 40.0 36.0 41.0 33.0 41.0 17 37.76336268881545 40.0 36.0 41.0 33.0 41.0 18 37.66935052418697 39.0 36.0 41.0 33.0 41.0 19 37.666226913313814 39.0 36.0 41.0 33.0 41.0 20 37.55664777186608 39.0 35.0 41.0 33.0 41.0 21 37.43604463652196 39.0 35.0 41.0 32.0 41.0 22 37.40566371185492 39.0 35.0 41.0 32.0 41.0 23 37.33655404019015 39.0 35.0 41.0 32.0 41.0 24 37.275265654319426 39.0 35.0 41.0 32.0 41.0 25 37.176735899605475 39.0 35.0 41.0 32.0 41.0 26 37.19570230604907 39.0 35.0 41.0 32.0 41.0 27 37.1645867403273 39.0 35.0 41.0 32.0 41.0 28 37.10314424620195 39.0 35.0 41.0 32.0 41.0 29 37.05985617146645 39.0 35.0 41.0 32.0 41.0 30 36.97120802483711 39.0 35.0 41.0 31.0 41.0 31 36.82883534729667 39.0 35.0 41.0 31.0 41.0 32 36.72596312551388 39.0 35.0 41.0 31.0 41.0 33 36.62258363072627 39.0 35.0 41.0 30.0 41.0 34 36.51126289087822 39.0 35.0 41.0 30.0 41.0 35 36.40190907437854 39.0 35.0 41.0 30.0 41.0 36 36.32805181773313 39.0 35.0 41.0 30.0 41.0 37 36.283422592562 39.0 35.0 41.0 30.0 41.0 38 36.1469480582214 39.0 35.0 41.0 30.0 41.0 39 36.08341488714927 39.0 35.0 41.0 29.0 41.0 40 35.99243614504039 39.0 35.0 41.0 29.0 41.0 41 35.926735826637554 38.0 35.0 41.0 29.0 41.0 42 35.91485694054836 38.0 35.0 41.0 29.0 41.0 43 35.894249339567324 38.0 35.0 41.0 29.0 41.0 44 35.779073266508334 38.0 35.0 40.0 28.0 41.0 45 35.723351165720956 38.0 35.0 40.0 28.0 41.0 46 35.70373943096111 38.0 35.0 40.0 28.0 41.0 47 35.64312264185913 38.0 35.0 40.0 28.0 41.0 48 35.550500953982635 38.0 34.0 40.0 28.0 41.0 49 35.48192394816009 38.0 34.0 40.0 28.0 41.0 50 35.388674444269 38.0 34.0 40.0 27.0 41.0 51 34.98779275825464 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 6.0 11 10.0 12 19.0 13 23.0 14 35.0 15 109.0 16 240.0 17 546.0 18 1087.0 19 2045.0 20 3634.0 21 5898.0 22 9178.0 23 13571.0 24 20458.0 25 29741.0 26 40265.0 27 47119.0 28 52239.0 29 58914.0 30 71075.0 31 86525.0 32 110370.0 33 144081.0 34 237399.0 35 316634.0 36 248184.0 37 329360.0 38 524957.0 39 1072079.0 40 358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.92742843816829 24.15028123297111 28.89126991331119 13.031020415549408 2 32.14496800064679 24.98013083440572 29.53747384464779 13.337427320299705 3 30.184028022017635 24.05326308176231 31.96689707991126 13.795811816308797 4 26.924375752116873 27.300627553330063 30.791529766680686 14.983466927872374 5 24.884221795635526 31.72788334939114 28.606549075452627 14.781345779520706 6 22.676591860924304 40.570544950721846 26.05608664853365 10.6967765398202 7 87.32450849536347 3.953139415725405 6.699973118616949 2.0223789702941746 8 87.7059847999059 3.3371442047561657 6.6638394028538634 2.2930315924840703 9 82.00876607446872 6.521289267323242 8.439003048016104 3.030941610191926 10 38.745412871483346 36.893866403904305 14.256618847381167 10.104101877231177 11 31.056461703660915 23.928341996571675 28.27072150390977 16.744474795857638 12 29.804448883488615 22.025192613427908 30.362186504261473 17.808171998822004 13 26.009883359314777 25.472635131486737 30.054612112733693 18.462869396464793 14 18.603609927490314 30.109659114291993 32.30304571031793 18.983685247899764 15 18.446553768749475 28.875216970120803 35.757288838855594 16.920940422274132 16 24.070308388713553 26.716066923844544 32.879900927072065 16.333723760369836 17 23.82808406955536 25.76911839862844 28.693089032833523 21.70970849898268 18 23.62724715665892 27.0557472017531 31.193991646048364 18.123013995539615 19 25.281313235826786 28.14165584065907 28.20531305720131 18.37171786631284 20 25.814737944458564 29.249104610609596 27.52916309002228 17.406994354909557 21 24.73951180956656 26.157336939310827 31.845507642222508 17.257643608900104 22 23.49861930094978 23.066590818942355 32.36390095859421 21.07088892151366 23 20.593970572912028 26.821870413053905 32.05962471721281 20.524534296821255 24 20.34961559038493 27.54544953056816 32.91472122021048 19.19021365883643 25 21.07833164972011 28.86949628491114 30.215520977840228 19.836651087528526 26 20.158264507555536 31.381840268545307 27.912244688883746 20.54765053501541 27 19.335886821496818 29.92528376495806 31.81874300784872 18.920086405696402 28 18.504519487251482 28.588365468893333 33.09039879305217 19.81671625080301 29 19.721215832404937 27.2515931086758 32.736912983999886 20.290278074919378 30 21.140821379484866 27.267441741680127 32.10060350310245 19.49113337573256 31 23.31999382399495 26.987624348286992 29.8059374291299 19.886444398588157 32 24.0086067125236 28.43157199467743 28.64422971119588 18.915591581603096 33 23.653048614441285 27.49694045496376 28.874049483343324 19.975961447251635 34 19.958244835403335 28.4509230880142 30.910438294967285 20.680393781615177 35 20.986742312026603 28.191682649074195 29.90800496065132 20.913570078247883 36 23.80312903968667 27.842866787131843 29.00962388537848 19.344380287803002 37 21.13440020220871 30.152681002042225 28.904579262574487 19.808339533174575 38 21.282495899932375 29.662248993991234 27.54565384075422 21.50960126532217 39 20.257325760624934 28.95875064904968 28.630745238915956 22.153178351409434 40 22.035349748392004 27.77217546275527 29.13442822189137 21.058046566961348 41 19.959762568214064 27.316125940301145 29.534788625059576 23.18932286642521 42 21.021796102520515 27.707525882452178 29.34191980941946 21.92875820560785 43 20.981401060019618 27.398667255469167 29.58744227872404 22.032489405787175 44 20.803767946825648 27.947444415224844 29.752845967923886 21.495941670025623 45 20.414644603890707 29.051128040317987 28.261118925164975 22.27310843062633 46 21.538671686081486 28.60313417662849 28.49050088977086 21.367693247519163 47 20.535450298190717 28.76818761979509 29.558050799100922 21.13831128291328 48 20.55976321033179 28.761299447807943 29.99428223350728 20.684655108352988 49 21.468680853771403 27.17322555873728 30.081259998429733 21.27683358906158 50 19.76762343180987 28.856303684325585 29.546959674714834 21.82911320914971 51 19.52414406436588 29.580145486364778 28.714162169167086 22.18154828010226 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2101.0 1 4103.5 2 6106.0 3 19647.5 4 33189.0 5 23269.5 6 13350.0 7 13100.5 8 12851.0 9 13575.0 10 14299.0 11 14532.0 12 14765.0 13 14696.5 14 14628.0 15 13644.5 16 12661.0 17 12503.5 18 12346.0 19 13612.5 20 14879.0 21 17371.5 22 19864.0 23 20826.5 24 21789.0 25 26341.0 26 38812.0 27 46731.0 28 55979.0 29 65227.0 30 73212.5 31 81198.0 32 91406.5 33 101615.0 34 118912.5 35 136210.0 36 142756.5 37 149303.0 38 160516.0 39 171729.0 40 192003.0 41 212277.0 42 234984.0 43 257691.0 44 265091.0 45 272491.0 46 277651.0 47 282811.0 48 279042.5 49 275274.0 50 251089.0 51 226904.0 52 210504.5 53 194105.0 54 180372.5 55 166640.0 56 159236.5 57 151833.0 58 138333.5 59 124834.0 60 110949.0 61 97064.0 62 80893.5 63 64723.0 64 55423.0 65 46123.0 66 39191.0 67 32259.0 68 25711.0 69 19163.0 70 15289.0 71 11415.0 72 8946.0 73 6477.0 74 5135.0 75 3079.0 76 2365.0 77 1767.5 78 1170.0 79 861.5 80 553.0 81 389.0 82 225.0 83 142.5 84 60.0 85 89.0 86 118.0 87 69.0 88 20.0 89 19.0 90 18.0 91 14.0 92 10.0 93 8.5 94 7.0 95 5.5 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3426163.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.870300895576634 #Duplication Level Percentage of deduplicated Percentage of total 1 77.25987380058203 12.261374443695148 2 9.269176445039347 2.9420923847393166 3 3.0822216774785907 1.4674735634536256 4 1.6256978648027935 1.0320125711886718 5 0.9411895101275498 0.7468480362742294 6 0.6515266488132099 0.6203954374891396 7 0.4550997796462932 0.5055799308348107 8 0.36724857031123925 0.46626762514477593 9 0.2958733269036715 0.4226038852442919 >10 2.8944650083855956 10.688584860342477 >50 1.2454843951863717 14.508542238912645 >100 1.9024366723951334 52.40935373864212 >500 0.006533086759427121 0.663772501059001 >1k 0.002986553947166684 0.6654314139013853 >5k 0.0 0.0 >10k+ 1.8665962169791775E-4 0.5996673690782951 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20243 0.5908358709144894 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.050727300481617485 0.0 2 0.0 0.0 0.0 0.1543417519831952 0.0 3 0.0 0.0 0.0 0.2268718680342996 0.0 4 0.0 0.0 0.0 0.3333174749712725 0.0 5 0.0 0.0 0.0 0.5680115044147053 0.0 6 0.0 0.0 0.0 0.8200135253343172 0.0 7 0.0 0.0 0.0 0.9871684447003835 0.0 8 0.0 0.0 0.0 1.3429600401381954 0.0 9 0.0 0.0 0.0 1.4871738443267293 0.0 10 0.0 0.0 0.0 1.7505004869879222 0.0 11 0.0 0.0 0.0 2.1125381366852656 0.0 12 0.0 0.0 0.0 2.4109477570098097 0.0 13 0.0 0.0 0.0 2.5298854724658457 0.0 14 0.0 0.0 0.0 2.5883181856788484 0.0 15 0.0 0.0 0.0 2.669195832188953 0.0 16 0.0 0.0 0.0 2.836234002877271 0.0 17 0.0 0.0 0.0 3.0376546591624507 0.0 18 0.0 0.0 0.0 3.269371597323303 0.0 19 0.0 0.0 0.0 3.4213783757515333 0.0 20 0.0 0.0 0.0 3.5958009003074283 0.0 21 0.0 0.0 0.0 3.7964335030178074 0.0 22 0.0 0.0 0.0 4.020532589955586 0.0 23 0.0 0.0 0.0 4.234328606082081 0.0 24 0.0 0.0 0.0 4.408634381960228 0.0 25 0.0 0.0 0.0 4.567208273511797 0.0 26 0.0 0.0 0.0 4.716092024810261 0.0 27 0.0 0.0 0.0 4.891098292754898 0.0 28 0.0 0.0 0.0 5.05769865590166 0.0 29 0.0 0.0 0.0 5.261249975555746 0.0 30 0.0 0.0 0.0 5.487508913031867 0.0 31 0.0 0.0 0.0 5.682479204871456 0.0 32 0.0 0.0 0.0 5.869656522471348 0.0 33 0.0 0.0 0.0 6.062846396975275 0.0 34 0.0 0.0 0.0 6.271651407128032 0.0 35 0.0 0.0 0.0 6.503485093966632 0.0 36 0.0 0.0 0.0 6.707328285315088 0.0 37 0.0 0.0 0.0 6.929384270392273 0.0 38 2.9187169437064145E-5 0.0 0.0 7.182874836953174 0.0 39 2.9187169437064145E-5 0.0 0.0 7.636268326988529 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGCGC 20 7.0352445E-4 45.000004 4 CCCGTTA 25 3.8924303E-5 45.0 24 CGTACCG 25 3.8924303E-5 45.0 44 TTACGCG 80 0.0 42.187504 1 CGTTTTT 10135 0.0 41.714355 1 TAATCGG 65 0.0 41.538464 2 TACGGGA 1555 0.0 40.659164 4 TTTCGCG 50 1.0822987E-9 40.5 1 GCGCTAA 50 1.0822987E-9 40.5 20 CTCACGA 970 0.0 40.360825 24 GGGCGAT 2950 0.0 40.194912 7 GTATCGA 45 1.9303116E-8 40.0 43 CGACGGT 985 0.0 39.746193 28 CGAACTA 80 0.0 39.375004 40 TACGTAG 160 0.0 39.375004 1 CACGACG 990 0.0 39.318184 26 CGGTCTA 985 0.0 39.28934 31 AGGGATC 4235 0.0 38.943325 6 CGGGAAT 705 0.0 38.936172 6 TAAGGGA 4725 0.0 38.61905 4 >>END_MODULE