##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547546_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2956595 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.432478915779807 31.0 31.0 33.0 30.0 34.0 2 31.85567553215777 31.0 31.0 34.0 30.0 34.0 3 31.990976105959728 33.0 31.0 34.0 30.0 34.0 4 35.7243572420301 37.0 35.0 37.0 35.0 37.0 5 35.642687618696506 37.0 35.0 37.0 33.0 37.0 6 35.67820448860936 37.0 35.0 37.0 33.0 37.0 7 35.98740544443862 37.0 35.0 37.0 35.0 37.0 8 35.930627968998124 37.0 35.0 37.0 35.0 37.0 9 37.56640290604564 39.0 37.0 39.0 35.0 39.0 10 37.164350545137225 39.0 37.0 39.0 33.0 39.0 11 36.95415740065853 39.0 37.0 39.0 33.0 39.0 12 36.64272144138781 39.0 35.0 39.0 32.0 39.0 13 36.52844031732449 39.0 35.0 39.0 32.0 39.0 14 37.62196919091049 40.0 36.0 41.0 32.0 41.0 15 37.80742036024549 40.0 36.0 41.0 33.0 41.0 16 37.849055078561655 40.0 36.0 41.0 33.0 41.0 17 37.771834492042366 40.0 36.0 41.0 33.0 41.0 18 37.67390968326741 39.0 36.0 41.0 33.0 41.0 19 37.6570419688865 39.0 36.0 41.0 33.0 41.0 20 37.54558943649705 39.0 35.0 41.0 32.0 41.0 21 37.42934930215332 39.0 35.0 41.0 32.0 41.0 22 37.365586764504435 39.0 35.0 41.0 32.0 41.0 23 37.27302657279743 39.0 35.0 41.0 32.0 41.0 24 37.20385713971646 39.0 35.0 41.0 32.0 41.0 25 37.125757839677064 39.0 35.0 41.0 32.0 41.0 26 37.13785790749156 39.0 35.0 41.0 32.0 41.0 27 37.098601262601065 39.0 35.0 41.0 32.0 41.0 28 37.026159822363226 39.0 35.0 41.0 31.0 41.0 29 36.98123145036774 39.0 35.0 41.0 31.0 41.0 30 36.9043051212628 39.0 35.0 41.0 31.0 41.0 31 36.771336283799435 39.0 35.0 41.0 31.0 41.0 32 36.63612534012944 39.0 35.0 41.0 30.0 41.0 33 36.5104483366846 39.0 35.0 41.0 30.0 41.0 34 36.41827642947377 39.0 35.0 41.0 30.0 41.0 35 36.287577094597 39.0 35.0 41.0 30.0 41.0 36 36.22612397031044 39.0 35.0 41.0 30.0 41.0 37 36.17867952830875 39.0 35.0 41.0 29.0 41.0 38 36.064835731644 39.0 35.0 41.0 29.0 41.0 39 35.997132174004214 39.0 35.0 41.0 29.0 41.0 40 35.94213850730316 39.0 35.0 41.0 29.0 41.0 41 35.87194154086035 39.0 35.0 41.0 28.0 41.0 42 35.84612975399065 38.0 35.0 41.0 28.0 41.0 43 35.819686159247375 38.0 35.0 41.0 28.0 41.0 44 35.721818510820725 38.0 35.0 40.0 28.0 41.0 45 35.66701120714876 38.0 35.0 40.0 28.0 41.0 46 35.6491443704667 38.0 35.0 40.0 28.0 41.0 47 35.58976457715717 38.0 35.0 40.0 28.0 41.0 48 35.47512324143145 38.0 34.0 40.0 27.0 41.0 49 35.4083613075176 38.0 34.0 40.0 27.0 41.0 50 35.31792721018604 38.0 34.0 40.0 27.0 41.0 51 34.90851841391871 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 5.0 12 11.0 13 16.0 14 40.0 15 81.0 16 192.0 17 489.0 18 1124.0 19 2024.0 20 3674.0 21 5696.0 22 8870.0 23 12853.0 24 18510.0 25 27333.0 26 37050.0 27 43557.0 28 47658.0 29 53104.0 30 62536.0 31 76412.0 32 95029.0 33 122629.0 34 196866.0 35 262313.0 36 214540.0 37 284329.0 38 456126.0 39 923252.0 40 271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.61583341648078 23.78289890904909 27.716004390185333 13.885263284284793 2 31.9503685827785 25.44775324317331 29.194123645612606 13.40775452843558 3 29.748545201490227 25.37422271227544 31.197407828938356 13.679824257295978 4 26.88413529752976 27.23440308868817 31.329891310781488 14.55157030300058 5 24.771705289361577 31.232076087526362 29.09925099650104 14.896967626611016 6 22.456000906448125 40.2311780950722 26.606958342282255 10.705862656197416 7 86.93233263263991 3.659209326945354 7.274787382106782 2.133670658307952 8 87.20332003537854 3.4194740909728925 7.202778872317649 2.174427001330923 9 81.1891720036055 6.692428283210923 8.789299853378633 3.3290998598049444 10 37.292831787918196 38.24091564789902 14.64062544920762 9.825627114975166 11 29.327080645134014 23.651227171797288 29.816156761409662 17.20553542165904 12 28.26775395344983 22.193942694214122 31.507866312430345 18.030437039905703 13 25.773026065457056 24.87814529889958 30.45723205241164 18.891596583231724 14 18.575591178365652 30.580312826071882 31.77239358112964 19.07170241443282 15 18.30467142100964 29.691756902788512 35.361623759764186 16.64194791643766 16 23.412709552711817 27.86614331688987 32.91894899369038 15.802198136707938 17 22.64276980783638 27.041749039012785 29.79325879939593 20.52222235375491 18 22.014750075678272 28.007758925385453 31.386747254865817 18.59074374407046 19 23.68400135967219 28.743334815894634 28.986519966380246 18.586143858052928 20 25.253780108537015 29.066544454008753 28.790314534117794 16.88936090333644 21 25.343072013583196 25.884438010616943 31.638354255486462 17.134135720313402 22 23.418729991764174 23.634180535379382 32.42693030327116 20.520159169585284 23 20.864947684752224 26.226858937392507 32.617250587246474 20.29094279060879 24 20.106270896081472 27.870607912142177 32.92679585807322 19.096325333703128 25 20.641075291001982 29.358028407678425 29.904298694951454 20.096597606368135 26 20.50142139860211 31.47810234408162 28.218102242613547 19.80237401470272 27 19.408542597142997 30.331952803816552 31.4609542395898 18.79855035945065 28 18.347592416276157 29.39154669476205 33.15442257055836 19.106438318403434 29 19.7197113571524 28.005053110081025 32.62056521099441 19.654670321772176 30 20.677908201833528 27.604795381173275 32.02146387990239 19.69583253709081 31 22.547322172972624 28.47958546909536 28.965414607005695 20.00767775092632 32 22.81932425645041 29.112509491492748 29.63084223574754 18.4373240163093 33 22.46878588376156 28.363100120239665 29.542125316453554 19.62598867954522 34 20.6330254904713 28.5730713878634 30.405212753183985 20.38869036848131 35 20.596767565391946 28.671766001092475 29.845751616301865 20.88571481721372 36 22.468007961861534 28.30509420465096 29.533162303257633 19.693735530229876 37 20.553880392816737 30.084573639609076 29.833744560888455 19.527801406685732 38 21.116520862681565 30.124247656510278 28.356403227361206 20.402828253446955 39 20.387134524681265 29.194123645612606 29.40798452273646 21.010757306969673 40 21.176860543970342 27.512019738922643 29.9763748501232 21.334744866983808 41 19.984204803160395 27.211708062822265 29.987502515562664 22.816584618454673 42 20.746230038270376 28.49375717675231 29.30387827889853 21.456134506078783 43 21.0695073217671 27.71397502870701 29.570976072137036 21.645541577388855 44 20.41436179118209 29.441266050980943 29.486453166564917 20.657918991272055 45 20.114591278142594 29.888165271198798 28.38735098990562 21.609892460752995 46 21.441726039582694 29.184653292047102 28.832254671336454 20.54136599703375 47 20.592641197052693 29.070670822348006 29.451784907976915 20.88490307262239 48 20.25082907872062 28.639330040130623 30.440726579054623 20.669114302094133 49 20.548502584899182 27.65654409887049 30.43183121124131 21.363122104989017 50 19.70357793339974 28.52720781845332 30.33421892413401 21.434995324012927 51 19.579719237839473 29.456587730142274 29.097018698874887 21.86667433314336 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2043.0 1 3463.0 2 4883.0 3 18813.0 4 32743.0 5 22934.0 6 13125.0 7 13028.5 8 12932.0 9 13578.5 10 14225.0 11 14484.0 12 14743.0 13 14582.5 14 14422.0 15 13361.0 16 12300.0 17 12299.5 18 12299.0 19 13000.0 20 13701.0 21 15076.0 22 16451.0 23 17778.0 24 19105.0 25 24971.5 26 35557.0 27 40276.0 28 49370.5 29 58465.0 30 68882.5 31 79300.0 32 87303.5 33 95307.0 34 107888.0 35 120469.0 36 125844.5 37 131220.0 38 144090.5 39 156961.0 40 170891.5 41 184822.0 42 205332.0 43 225842.0 44 229557.0 45 233272.0 46 238999.0 47 244726.0 48 233427.0 49 222128.0 50 211017.0 51 199906.0 52 183504.5 53 167103.0 54 152965.5 55 138828.0 56 131248.5 57 123669.0 58 109478.5 59 95288.0 60 85466.5 61 75645.0 62 65685.0 63 55725.0 64 46504.5 65 37284.0 66 29915.5 67 22547.0 68 17907.5 69 13268.0 70 10917.0 71 8566.0 72 6891.0 73 5216.0 74 4313.0 75 2674.0 76 1938.0 77 1399.0 78 860.0 79 667.0 80 474.0 81 312.0 82 150.0 83 107.0 84 64.0 85 43.0 86 22.0 87 14.5 88 7.0 89 6.5 90 6.0 91 8.0 92 10.0 93 10.0 94 10.0 95 5.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2956595.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.626256478431813 #Duplication Level Percentage of deduplicated Percentage of total 1 78.18081698659807 12.998543149125187 2 8.314942480389291 2.764927325647207 3 2.8605018277970524 1.4267831113793037 4 1.460629021984781 0.9713917095743997 5 0.8771932741952239 0.7292220178962577 6 0.6126811390854242 0.611195625475921 7 0.42849605269787794 0.4986999690505387 8 0.3443797347924423 0.45805966373067797 9 0.28801059075965146 0.43096841554271664 >10 3.3046236000229134 13.356166485464247 >50 1.5986180723468877 19.494648684830036 >100 1.7220867234618207 44.481644387849514 >500 0.004336188624704096 0.5116998941417045 >1k 0.0024778220712594837 0.5699591843368385 >5k 0.0 0.0 >10k+ 2.0648517260495695E-4 0.6960903759555317 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20276 0.6857888889076793 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.764538261073972E-5 0.0 0.0 0.04552534249702783 0.0 2 6.764538261073972E-5 0.0 0.0 0.13806422590851977 0.0 3 6.764538261073972E-5 0.0 0.0 0.19931711986254458 0.0 4 6.764538261073972E-5 0.0 0.0 0.29821466923944606 0.0 5 6.764538261073972E-5 0.0 0.0 0.5393028128641224 0.0 6 6.764538261073972E-5 0.0 0.0 0.7624311074056473 0.0 7 6.764538261073972E-5 0.0 0.0 0.91859047316254 0.0 8 6.764538261073972E-5 0.0 0.0 1.2402780901679127 0.0 9 6.764538261073972E-5 0.0 0.0 1.36163390657158 0.0 10 6.764538261073972E-5 0.0 0.0 1.6239965230273339 0.0 11 6.764538261073972E-5 0.0 0.0 1.9089526972750748 0.0 12 6.764538261073972E-5 0.0 0.0 2.168372739587262 0.0 13 6.764538261073972E-5 0.0 0.0 2.2717010615251665 0.0 14 6.764538261073972E-5 0.0 0.0 2.320304268930983 0.0 15 6.764538261073972E-5 0.0 0.0 2.3939362679027734 0.0 16 6.764538261073972E-5 0.0 0.0 2.527603543941595 0.0 17 6.764538261073972E-5 0.0 0.0 2.691542128698723 0.0 18 6.764538261073972E-5 0.0 0.0 2.871512669134596 0.0 19 6.764538261073972E-5 0.0 0.0 3.0053828813212498 0.0 20 6.764538261073972E-5 0.0 0.0 3.139083980051377 0.0 21 6.764538261073972E-5 0.0 0.0 3.2962580265474304 0.0 22 6.764538261073972E-5 0.0 0.0 3.482147537961743 0.0 23 6.764538261073972E-5 0.0 0.0 3.6620166103237 0.0 24 6.764538261073972E-5 0.0 0.0 3.805763048371522 0.0 25 6.764538261073972E-5 0.0 0.0 3.9334775307405985 0.0 26 6.764538261073972E-5 0.0 0.0 4.0619699350096985 0.0 27 6.764538261073972E-5 0.0 0.0 4.1969562960094295 0.0 28 1.0146807391610957E-4 0.0 0.0 4.340736556748557 0.0 29 1.0146807391610957E-4 0.0 0.0 4.5105941124841245 0.0 30 1.0146807391610957E-4 0.0 0.0 4.692052851337434 0.0 31 1.0146807391610957E-4 0.0 0.0 4.860083981742512 0.0 32 1.0146807391610957E-4 0.0 0.0 5.026559268347541 0.0 33 1.0146807391610957E-4 0.0 0.0 5.1897537538959515 0.0 34 1.0146807391610957E-4 0.0 0.0 5.365022940240378 0.0 35 1.0146807391610957E-4 0.0 0.0 5.551893309702546 0.0 36 1.0146807391610957E-4 0.0 0.0 5.743194451725718 0.0 37 1.0146807391610957E-4 0.0 0.0 5.939129302457726 0.0 38 1.3529076522147943E-4 0.0 0.0 6.153666633407687 0.0 39 1.3529076522147943E-4 0.0 0.0 6.4857039939525025 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCACG 90 0.0 45.000004 1 TACGCGC 35 1.212793E-7 45.0 1 TCGCTAA 20 7.0350897E-4 45.0 17 CATACCG 40 6.8212103E-9 45.0 19 CGACTTA 25 3.8922994E-5 45.0 35 TCGACTC 20 7.0350897E-4 45.0 44 ATCGATC 30 2.1666656E-6 44.999996 31 CGTTTTT 10135 0.0 42.513565 1 CTCACGA 710 0.0 41.514084 24 CGACGGT 695 0.0 41.43885 28 GTCCGCG 45 1.9301297E-8 40.000004 10 TCGGTCA 45 1.9301297E-8 40.000004 39 TCACGAC 730 0.0 39.760273 25 GGGCGAT 2605 0.0 39.731285 7 CGGTCTA 695 0.0 39.496403 31 TATAGCG 185 0.0 38.91892 1 CACGACG 730 0.0 38.835617 26 TACGGGA 1630 0.0 38.788345 4 CGTATAC 35 6.2516247E-6 38.571426 20 TCGCGGA 35 6.2516247E-6 38.571426 29 >>END_MODULE