##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547542_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2518483 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.380514381077816 31.0 31.0 33.0 30.0 34.0 2 31.792617619416134 31.0 31.0 34.0 30.0 34.0 3 31.936497486780734 31.0 31.0 34.0 30.0 34.0 4 35.65988374747815 37.0 35.0 37.0 33.0 37.0 5 35.5597703061724 37.0 35.0 37.0 33.0 37.0 6 35.60832969688499 37.0 35.0 37.0 33.0 37.0 7 35.977182692914745 37.0 35.0 37.0 35.0 37.0 8 35.92725541526387 37.0 35.0 37.0 35.0 37.0 9 37.596183496176074 39.0 37.0 39.0 35.0 39.0 10 37.11831646272776 39.0 37.0 39.0 33.0 39.0 11 36.84789653136432 39.0 37.0 39.0 32.0 39.0 12 36.371030100262736 38.0 35.0 39.0 32.0 39.0 13 36.15297224559387 38.0 35.0 39.0 32.0 39.0 14 37.238020665614975 39.0 35.0 41.0 32.0 41.0 15 37.46886200939216 39.0 35.0 41.0 32.0 41.0 16 37.548465882040894 39.0 35.0 41.0 33.0 41.0 17 37.47097042147991 39.0 35.0 41.0 32.0 41.0 18 37.39864315145268 39.0 35.0 41.0 32.0 41.0 19 37.36966538983984 39.0 35.0 41.0 32.0 41.0 20 37.268770525749034 39.0 35.0 41.0 32.0 41.0 21 37.13060322424253 39.0 35.0 41.0 32.0 41.0 22 37.05484055282486 39.0 35.0 41.0 32.0 41.0 23 36.97701354347041 39.0 35.0 41.0 32.0 41.0 24 36.924614142720046 39.0 35.0 41.0 32.0 41.0 25 36.835595078465886 38.0 35.0 41.0 31.0 41.0 26 36.811748183331 38.0 35.0 41.0 31.0 41.0 27 36.77358354215613 38.0 35.0 41.0 31.0 41.0 28 36.731771864253204 38.0 35.0 41.0 31.0 41.0 29 36.71548110509382 38.0 35.0 41.0 31.0 41.0 30 36.659432285228846 38.0 35.0 41.0 31.0 41.0 31 36.529058564222986 38.0 35.0 41.0 31.0 41.0 32 36.378812165895106 38.0 35.0 41.0 30.0 41.0 33 36.26804310372554 38.0 35.0 41.0 30.0 41.0 34 36.21080944362142 38.0 35.0 41.0 30.0 41.0 35 36.0915106435104 38.0 35.0 41.0 30.0 41.0 36 36.01188453525396 38.0 35.0 41.0 30.0 41.0 37 35.9509819998785 38.0 35.0 41.0 30.0 41.0 38 35.84037732238018 38.0 35.0 40.0 29.0 41.0 39 35.80253986229012 38.0 35.0 40.0 29.0 41.0 40 35.73063308348716 38.0 35.0 40.0 29.0 41.0 41 35.69284605057886 38.0 35.0 40.0 29.0 41.0 42 35.65178363324271 38.0 35.0 40.0 29.0 41.0 43 35.57835093586099 38.0 35.0 40.0 28.0 41.0 44 35.45684564874966 38.0 34.0 40.0 28.0 41.0 45 35.39250652079049 38.0 34.0 40.0 28.0 41.0 46 35.3301928184546 38.0 34.0 40.0 27.0 41.0 47 35.24928975101281 37.0 34.0 40.0 27.0 41.0 48 35.14924063414365 37.0 34.0 40.0 27.0 41.0 49 35.09419678433406 37.0 34.0 40.0 27.0 41.0 50 34.99983164468452 37.0 34.0 40.0 27.0 41.0 51 34.55333587719274 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 7.0 12 9.0 13 17.0 14 26.0 15 74.0 16 126.0 17 383.0 18 765.0 19 1533.0 20 2784.0 21 4556.0 22 6897.0 23 10542.0 24 15680.0 25 22827.0 26 30320.0 27 35989.0 28 41109.0 29 48242.0 30 57729.0 31 71261.0 32 89393.0 33 116171.0 34 194216.0 35 296592.0 36 187947.0 37 232646.0 38 351302.0 39 699108.0 40 230.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.205227114894164 24.57082299145954 29.337819631897453 12.886130261748837 2 30.52242163238743 26.288960457545272 29.927460300506297 13.261157609560994 3 27.733719068185092 25.784807759274138 32.764128247043956 13.717344925496816 4 26.12949938514574 27.17691562738363 32.10694692003083 14.586638067439802 5 23.715466810774583 31.51230323968834 30.28803450331013 14.484195446226956 6 21.747774354641265 41.152431840913756 26.21923594481281 10.880557859632168 7 87.48159110067449 4.060499912050231 6.481878178252544 1.976030809022733 8 87.64172718259366 3.3640092071298477 6.401750577629469 2.592513032647034 9 83.07266715717358 6.09497860418355 7.6503196567139815 3.182034581928883 10 42.64241608936808 34.25641546915345 13.220974689922466 9.880193751555996 11 31.935613621374454 25.074658038192037 25.777025296577342 17.212703043856163 12 31.59159700502247 23.16334873016812 28.450618884463385 16.794435380346027 13 23.094458052724594 32.61121873762896 27.362106474413366 16.932216735233073 14 16.829654994693232 36.22430645749842 29.01353711738376 17.932501430424587 15 15.84267195768246 29.186101315752378 38.7903749995533 16.180851727011856 16 18.672748634793244 26.80331771149537 37.11936908051394 17.404564573197437 17 18.81148294429623 26.51679602363804 27.788037481293305 26.88368355077243 18 21.276379471292838 27.70814811932421 31.025264018061666 19.990208391321286 19 23.809610785540343 29.810921892266094 27.510330623633354 18.869136698560204 20 25.757172075412065 27.833541064204127 27.515770406232644 18.893516454151168 21 23.357989710472534 27.990302098525184 30.07631975280357 18.575388438198708 22 21.936578487923086 25.2509149356974 29.71042488672745 23.102081689652067 23 18.435105577444837 29.266308329260116 29.757556433773825 22.54102965952123 24 19.02105354691693 28.038704251726138 33.85172740892037 19.08851479243656 25 18.95506143976354 29.28167472244204 30.2951419564873 21.46812188130712 26 18.08703890397513 34.066976032794344 27.082851065502528 20.763133997727998 27 18.24649997637467 33.66594096525567 29.889778886734593 18.197780171635067 28 16.081148850319813 31.324491767464778 33.730781585581475 18.863577796633926 29 16.65677314478597 29.205557472494352 33.14106150408798 20.9966078786317 30 19.036618472310515 30.580829809055686 31.042020136725164 19.340531581908632 31 24.084736724448806 30.48259607072988 25.59012707252739 19.842540132293923 32 22.854789966817325 31.39516923481318 26.858708198546505 18.891332599822988 33 22.249544666372575 30.06980789626136 25.98520617371648 21.695441263649588 34 19.336640350560238 30.706738937685902 28.34063203920773 21.615988672546134 35 18.485890117185626 30.090097888292277 28.661857157661974 22.762154836860127 36 23.681398683254958 29.41449277203777 27.42940889416367 19.4746996505436 37 20.053937231261834 31.10904461137915 29.028387326815384 19.808630830543624 38 18.52607303682415 33.054183808268704 26.282607426772387 22.137135728134755 39 19.6662038219039 30.59722856973821 28.41988609809953 21.31668151025836 40 20.63909107188732 29.55271089779046 27.49714808477961 22.311049945542614 41 18.16327527324981 28.83056983112453 28.555165947119754 24.450988948505906 42 20.695752165093033 30.07334176962878 26.51127682815409 22.719629237124096 43 20.87784590962099 29.291085149274387 27.78668746225406 22.04438147885056 44 19.453853768320055 31.68728953103912 27.5359809853789 21.322875715261922 45 18.987819254686254 32.865181142775235 25.98008404265584 22.166915559882675 46 22.27884802081253 31.412441537226975 26.455409863794994 19.853300578165506 47 20.408952532139388 30.475965094860673 27.59268178502694 21.522400587973 48 20.206687914907505 28.915025433961635 29.689062820753602 21.189223830377255 49 20.761029556284477 27.783788891963933 28.746948063576365 22.70823348817522 50 19.283870488702924 29.224775390582348 29.725711867024714 21.765642253690018 51 18.070243078869304 30.52996585643024 27.429369187721335 23.970421876979117 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4204.0 1 4880.0 2 5556.0 3 13045.0 4 20534.0 5 14568.5 6 8603.0 7 9445.0 8 10287.0 9 11503.0 10 12719.0 11 13834.0 12 14949.0 13 15146.0 14 15343.0 15 14793.0 16 14243.0 17 13222.0 18 12201.0 19 12649.0 20 13097.0 21 13042.5 22 12988.0 23 14369.5 24 15751.0 25 19164.0 26 28348.0 27 34119.0 28 37280.0 29 40441.0 30 45595.0 31 50749.0 32 61977.0 33 73205.0 34 79727.0 35 86249.0 36 92574.0 37 98899.0 38 106765.0 39 114631.0 40 139467.5 41 164304.0 42 190363.0 43 216422.0 44 220818.5 45 225215.0 46 229779.5 47 234344.0 48 235485.5 49 236627.0 50 216892.5 51 197158.0 52 173490.0 53 149822.0 54 134032.0 55 118242.0 56 105442.5 57 92643.0 58 82071.5 59 71500.0 60 62261.5 61 53023.0 62 44102.0 63 35181.0 64 27517.5 65 19854.0 66 15000.0 67 10146.0 68 7507.0 69 4868.0 70 4029.5 71 3191.0 72 2631.5 73 2072.0 74 1629.5 75 1003.0 76 819.0 77 538.5 78 258.0 79 169.5 80 81.0 81 74.5 82 68.0 83 72.5 84 77.0 85 48.5 86 20.0 87 16.5 88 13.0 89 7.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2518483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.291276068978302 #Duplication Level Percentage of deduplicated Percentage of total 1 74.38523051289478 12.862155562530523 2 10.801078047700233 3.735288447307319 3 4.187101084576975 2.1720096234641684 4 2.1647449337550433 1.4972480907392243 5 1.3194584528772635 1.1407560185123882 6 0.864788837796471 0.8971981521425807 7 0.6104700630194784 0.7389064474061469 8 0.4766050129161257 0.6592887083353359 9 0.37248179547294996 0.5796617000572342 >10 2.645756492877417 9.40481331989853 >50 0.6761823397561739 8.55118223391442 >100 1.478388797466701 54.046340071538566 >500 0.012585999474732894 1.45125629160993 >1k 0.004894555351285014 1.7569430167379867 >5k 0.0 0.0 >10k+ 2.3307406434690543E-4 0.5069523158056459 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12579 0.4994673380761355 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4467 0.17736867789061905 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3434 0.13635192296314885 No Hit CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGCT 3266 0.1296812406516145 No Hit ATGCTGGGGAAACTTATGTCTTTTAGAAAGACAGTGCCTCTGTATGCTTTG 3034 0.12046934603092416 No Hit GTATTTGGGATTGGTTCTTTTTTTTATAGAGTGTAAACCAAGTTTTATATT 2770 0.10998684525565589 No Hit GCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC 2608 0.10355440159810489 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9706442330561694E-5 0.0 0.0 0.1421093571010803 0.0 2 3.9706442330561694E-5 0.0 0.0 0.44896074343166104 0.0 3 3.9706442330561694E-5 0.0 0.0 0.6587298782640184 0.0 4 3.9706442330561694E-5 0.0 0.0 0.9418765185232538 0.0 5 3.9706442330561694E-5 0.0 0.0 1.5166669777004649 0.0 6 3.9706442330561694E-5 0.0 0.0 2.0069621275982406 0.0 7 3.9706442330561694E-5 0.0 0.0 2.314012046140474 0.0 8 3.9706442330561694E-5 0.0 0.0 3.0429429144449256 0.0 9 3.9706442330561694E-5 0.0 0.0 3.251917920430672 0.0 10 3.9706442330561694E-5 0.0 0.0 3.7260922547422397 0.0 11 3.9706442330561694E-5 0.0 0.0 4.488058883065719 0.0 12 3.9706442330561694E-5 0.0 0.0 5.048832968100242 0.0 13 3.9706442330561694E-5 0.0 0.0 5.2715066966900315 0.0 14 3.9706442330561694E-5 0.0 0.0 5.35699466702773 0.0 15 3.9706442330561694E-5 0.0 0.0 5.50112905268767 0.0 16 3.9706442330561694E-5 0.0 0.0 5.851339874043224 0.0 17 3.9706442330561694E-5 0.0 0.0 6.2773105873654895 0.0 18 3.9706442330561694E-5 0.0 0.0 6.784441268811423 0.0 19 3.9706442330561694E-5 0.0 0.0 7.071320314649731 0.0 20 3.9706442330561694E-5 0.0 0.0 7.360700866354866 0.0 21 3.9706442330561694E-5 0.0 0.0 7.7259604293537025 0.0 22 3.9706442330561694E-5 0.0 0.0 8.11961009861889 0.0 23 3.9706442330561694E-5 0.0 0.0 8.527593793565412 0.0 24 3.9706442330561694E-5 0.0 0.0 8.830752480759251 0.0 25 3.9706442330561694E-5 0.0 0.0 9.095197386680791 0.0 26 3.9706442330561694E-5 0.0 0.0 9.339114061917432 0.0 27 3.9706442330561694E-5 0.0 0.0 9.586802849175475 0.0 28 3.9706442330561694E-5 0.0 0.0 9.861730255872285 0.0 29 3.9706442330561694E-5 0.0 0.0 10.160521234409762 0.0 30 3.9706442330561694E-5 0.0 0.0 10.510652642880654 0.0 31 3.9706442330561694E-5 0.0 0.0 10.836046937779608 0.0 32 3.9706442330561694E-5 0.0 0.0 11.117406788133968 0.0 33 3.9706442330561694E-5 0.0 0.0 11.415760995805808 0.0 34 3.9706442330561694E-5 0.0 0.0 11.722294730597746 0.0 35 3.9706442330561694E-5 0.0 0.0 12.066748117815367 0.0 36 3.9706442330561694E-5 0.0 0.0 12.381223141073416 0.0 37 3.9706442330561694E-5 0.0 0.0 12.707689509915294 0.0 38 3.9706442330561694E-5 0.0 0.0 13.027961673753605 0.0 39 3.9706442330561694E-5 0.0 0.0 13.370112087316055 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGCGA 20 7.034888E-4 45.000004 34 ACCGGTC 20 7.034888E-4 45.000004 12 ACGTTAC 45 3.8562575E-10 45.000004 30 GACCGTA 20 7.034888E-4 45.000004 9 CGGATAC 40 6.8212103E-9 45.000004 32 TCGAATA 45 3.8562575E-10 45.000004 9 GCGTACC 20 7.034888E-4 45.000004 14 TCGCGCG 20 7.034888E-4 45.000004 2 CTTACCG 65 0.0 45.000004 1 TGTCACG 50 2.1827873E-11 45.0 1 GTCGCGC 25 3.892134E-5 45.0 22 ATTAGCG 110 0.0 45.0 1 GGTCGAC 35 1.212702E-7 45.0 9 CATTGCG 25 3.892134E-5 45.0 1 CCGGATA 25 3.892134E-5 45.0 10 TCTACGC 25 3.892134E-5 45.0 32 TTGCGTA 55 1.8189894E-12 45.0 14 AGTTCGG 50 2.1827873E-11 45.0 2 CGTCGGA 35 1.212702E-7 45.0 17 TAATGCG 165 0.0 45.0 1 >>END_MODULE