##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547535_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 691129 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.343119735968248 31.0 31.0 33.0 30.0 34.0 2 31.7540198718329 31.0 31.0 34.0 30.0 34.0 3 31.706348597729225 31.0 31.0 34.0 30.0 34.0 4 35.58904343472781 37.0 35.0 37.0 33.0 37.0 5 35.558545510317174 37.0 35.0 37.0 33.0 37.0 6 35.605302338637216 37.0 35.0 37.0 33.0 37.0 7 35.9401544429477 37.0 35.0 37.0 35.0 37.0 8 35.88236349509281 37.0 35.0 37.0 35.0 37.0 9 37.5353978779649 39.0 37.0 39.0 35.0 39.0 10 37.118921359109514 39.0 37.0 39.0 33.0 39.0 11 36.905459038761215 39.0 37.0 39.0 32.0 39.0 12 36.635503646931326 39.0 35.0 39.0 32.0 39.0 13 36.57161253543116 39.0 35.0 39.0 32.0 39.0 14 37.705947804244936 40.0 36.0 41.0 32.0 41.0 15 37.799584448055285 40.0 36.0 41.0 33.0 41.0 16 37.81649156669739 40.0 36.0 41.0 33.0 41.0 17 37.70268358005524 40.0 36.0 41.0 32.0 41.0 18 37.50545556618229 39.0 36.0 41.0 32.0 41.0 19 37.36222470768843 39.0 36.0 41.0 32.0 41.0 20 37.14775678635971 39.0 35.0 41.0 32.0 41.0 21 37.026669406145594 39.0 35.0 41.0 32.0 41.0 22 36.98266604353167 39.0 35.0 41.0 32.0 41.0 23 36.90495985554072 38.0 35.0 41.0 31.0 41.0 24 36.8069984040606 38.0 35.0 41.0 31.0 41.0 25 36.71456848142677 38.0 35.0 41.0 31.0 41.0 26 36.70419993951925 38.0 35.0 41.0 31.0 41.0 27 36.65866574836246 38.0 35.0 41.0 31.0 41.0 28 36.54288707318026 38.0 35.0 40.0 31.0 41.0 29 36.45856706924467 38.0 35.0 40.0 31.0 41.0 30 36.28407142516086 38.0 35.0 40.0 30.0 41.0 31 36.053265019989034 38.0 35.0 40.0 30.0 41.0 32 35.71890197054385 38.0 35.0 40.0 27.0 41.0 33 35.38015334329771 38.0 34.0 41.0 25.0 41.0 34 35.0582988125227 38.0 34.0 41.0 23.0 41.0 35 34.82598617624206 38.0 34.0 41.0 23.0 41.0 36 34.75284787644564 38.0 34.0 40.0 22.0 41.0 37 34.71619914661373 38.0 34.0 40.0 22.0 41.0 38 34.581642500893466 38.0 34.0 40.0 21.0 41.0 39 34.5022607935711 38.0 34.0 40.0 21.0 41.0 40 34.39016594586539 38.0 34.0 40.0 20.0 41.0 41 34.27138348991288 38.0 33.0 40.0 20.0 41.0 42 34.22340547133748 38.0 33.0 40.0 19.0 41.0 43 34.15684915551221 38.0 33.0 40.0 19.0 41.0 44 34.01898777218146 38.0 33.0 40.0 18.0 41.0 45 33.937256286453035 37.0 33.0 40.0 19.0 41.0 46 33.89783238729673 37.0 33.0 40.0 19.0 41.0 47 33.83312666665702 37.0 33.0 40.0 19.0 41.0 48 33.716492868914486 37.0 33.0 40.0 18.0 41.0 49 33.63810084658581 37.0 33.0 40.0 18.0 41.0 50 33.55337136771862 37.0 33.0 40.0 18.0 41.0 51 33.15832066083177 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 1.0 13 6.0 14 8.0 15 22.0 16 56.0 17 158.0 18 361.0 19 765.0 20 1279.0 21 2008.0 22 3110.0 23 4440.0 24 6943.0 25 10858.0 26 15294.0 27 17539.0 28 17714.0 29 17273.0 30 18073.0 31 20605.0 32 23804.0 33 29749.0 34 45777.0 35 57467.0 36 51535.0 37 64766.0 38 100061.0 39 181409.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.666055106933726 22.558017388938968 26.230124911557755 20.545802592569547 2 37.37898424172622 22.957942728492075 27.09132448500931 12.571748544772394 3 27.206498352695373 22.88487388027416 36.74856647601244 13.16006129101803 4 24.4659101267636 25.07057293211542 36.116701802413154 14.346815138707825 5 22.39046545579769 29.057816992196827 34.3775185240382 14.174199027967283 6 21.0309508065788 37.0851172501805 31.379814766852498 10.5041171763882 7 80.36994540816548 3.2506232555716807 13.995650594896178 2.3837807413666625 8 80.86565604973892 2.6644808711542995 14.084635429854627 2.385227649252166 9 75.55738509019301 5.348350307974344 15.611846703003346 3.482417898829307 10 36.37946027442055 31.727362040950386 21.06176994454002 10.831407740089043 11 25.96765582112746 22.597083901847554 33.33140412281933 18.103856154205655 12 25.744687315971404 19.737415156938866 36.13232840757659 18.385569119513146 13 23.6071702967174 20.21156687101829 36.385681978328215 19.795580853936094 14 17.818381228395857 25.024850642933522 37.338181439355026 19.818586689315598 15 17.70147107124719 26.071977879672247 39.1976027630153 17.028948286065265 16 22.969952063941754 24.67354140833332 37.06630744766896 15.290199080055967 17 22.001102543808752 24.997070011531854 34.532771740152704 18.469055704506683 18 21.732411749470792 26.145336109467266 34.49819064168918 17.624061499372765 19 22.23651445678014 28.03919384080251 32.60983116031884 17.11446054209851 20 24.211543720492124 26.880654696880036 32.01225820360598 16.89554337902186 21 24.581083994449664 25.05711668878024 34.09638432188491 16.26541499488518 22 22.1981713978143 22.55324259291681 35.443600254077026 19.80498575519187 23 20.470852764100478 24.82156008502031 35.16883244661995 19.53875470425926 24 20.78338486736919 24.77511434189565 35.60160259517398 18.839898195561176 25 21.826171380451406 25.425210054852275 32.66206453498551 20.086554029710808 26 20.1285143583904 27.73288344144147 32.533434423964266 19.605167776203864 27 18.962161911886202 26.21811557610808 35.19748122275291 19.622241289252802 28 18.23856327834601 26.43037696291141 35.641392562025324 19.689667196717256 29 20.06586324694811 26.12594754380152 34.05427930241677 19.7539099068336 30 20.796117656761616 24.191431700883626 34.515987608680874 20.496463033673887 31 21.66961594723995 25.008066511461678 33.13071799910002 20.191599542198347 32 22.418390777987902 26.27758349020226 32.2172850509818 19.086740680828036 33 21.825158544931554 25.764365263214252 31.75745772496886 20.653018466885342 34 19.764761715974878 26.911907907206906 32.38136440519787 20.94196597162035 35 19.755935577873306 27.15180523462335 31.402820602232 21.689438585271343 36 20.325583212395948 28.67293949465295 30.439324641275363 20.562152651675735 37 21.103440891642517 28.920216052285465 29.424029378017707 20.552313678054315 38 20.440033626139257 28.908351407624338 29.16069214285611 21.490922823380295 39 20.51049804016327 27.229359497286325 28.982722472939205 23.2774199896112 40 21.33523553490014 26.076173912540206 30.506316476374163 22.082274076185488 41 18.72110705816136 26.942292972802473 31.07798978193651 23.25861018709966 42 19.672304302091213 28.903865993179277 29.189919682143277 22.23391002258623 43 20.092341661252817 27.14399193204163 30.45104459514794 22.312621811557612 44 20.752421038619417 27.74199896112014 29.850433131875526 21.655146868384918 45 21.032542405252855 26.864738710139495 29.7083467775191 22.394372107088547 46 20.745186499191902 27.886545058881918 29.691128573681613 21.67713986824457 47 20.846470051177132 27.369709562180145 30.12158366961884 21.662236717023884 48 19.918278642626774 26.428495982660255 31.490358529304952 22.162866845408022 49 20.519758250630492 26.12146212935646 31.104323505452676 22.254456114560377 50 18.787375439317408 26.529056080702734 32.23392449166509 22.449643988314772 51 18.618955361444826 26.461774864026832 32.54746943045365 22.371800344074696 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 415.0 1 770.0 2 1125.0 3 11593.5 4 22062.0 5 15068.5 6 8075.0 7 7687.5 8 7300.0 9 7335.5 10 7371.0 11 7493.0 12 7615.0 13 7303.5 14 6992.0 15 6689.5 16 6387.0 17 5988.5 18 5590.0 19 5396.5 20 5203.0 21 5057.0 22 4911.0 23 5181.0 24 5451.0 25 5814.5 26 7186.0 27 8194.0 28 9193.5 29 10193.0 30 11722.5 31 13252.0 32 14713.5 33 16175.0 34 18064.0 35 19953.0 36 21547.5 37 23142.0 38 24743.0 39 26344.0 40 28594.5 41 30845.0 42 32894.5 43 34944.0 44 37187.5 45 39431.0 46 41343.5 47 43256.0 48 46804.0 49 50352.0 50 51420.5 51 52489.0 52 50310.0 53 48131.0 54 43606.0 55 39081.0 56 37108.5 57 35136.0 58 34029.0 59 32922.0 60 29949.0 61 26976.0 62 23255.5 63 19535.0 64 15557.0 65 11579.0 66 9042.0 67 6505.0 68 5004.0 69 3503.0 70 2803.5 71 2104.0 72 1630.0 73 1156.0 74 925.0 75 499.0 76 304.0 77 218.5 78 133.0 79 97.0 80 61.0 81 45.5 82 30.0 83 21.5 84 13.0 85 13.0 86 13.0 87 8.0 88 3.0 89 3.5 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 691129.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.72276669184246 #Duplication Level Percentage of deduplicated Percentage of total 1 69.62963779933959 26.26622581541982 2 8.930684488374974 6.737802547068511 3 4.6796376601963825 5.29586638973843 4 3.2081383228346896 4.84079413869807 5 2.3970122345270624 4.521096664027817 6 1.8190891007632437 4.11726442438592 7 1.4969944469162804 3.9529540582004605 8 1.239579308050379 3.7408288826895966 9 0.9912708613556129 3.3654131488205543 >10 5.558852881105704 32.43897982000809 >50 0.028997774185924925 0.731730292051692 >100 0.01701202660395682 1.2773557142905643 >500 0.002319821809630468 0.5489800078316598 >1k 3.866369682717447E-4 0.14949641552270226 >5k 0.0 0.0 >10k+ 3.866369682717447E-4 2.0152116812460266 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13817 1.999192625399889 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCGTCTT 1025 0.14830805826408672 No Hit GCCCTGCTAGAGGACTTGCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC 831 0.120238045285323 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4469078855032852E-4 0.0 0.0 0.09679813754016978 0.0 2 1.4469078855032852E-4 0.0 0.0 0.2435145971302029 0.0 3 1.4469078855032852E-4 0.0 0.0 0.4220630302013083 0.0 4 1.4469078855032852E-4 0.0 0.0 0.5767374831616094 0.0 5 1.4469078855032852E-4 0.0 0.0 0.9886721581643948 0.0 6 1.4469078855032852E-4 0.0 0.0 1.8108052187073613 0.0 7 1.4469078855032852E-4 0.0 0.0 2.3477527350176306 0.0 8 1.4469078855032852E-4 0.0 0.0 3.0934890592060236 0.0 9 1.4469078855032852E-4 0.0 0.0 3.5960001678413147 0.0 10 1.4469078855032852E-4 0.0 0.0 4.126291907878269 0.0 11 1.4469078855032852E-4 0.0 0.0 4.574109898441535 0.0 12 1.4469078855032852E-4 0.0 0.0 4.886207929344594 0.0 13 1.4469078855032852E-4 0.0 0.0 5.066058579512653 0.0 14 1.4469078855032852E-4 0.0 0.0 5.192952401071291 0.0 15 1.4469078855032852E-4 0.0 0.0 5.293512499113769 0.0 16 1.4469078855032852E-4 0.0 0.0 5.421129774615158 0.0 17 1.4469078855032852E-4 0.0 0.0 5.5650971092227355 0.0 18 1.4469078855032852E-4 0.0 0.0 5.740462344945734 0.0 19 1.4469078855032852E-4 0.0 0.0 5.86200260732801 0.0 20 1.4469078855032852E-4 0.0 0.0 5.9941052972744595 0.0 21 1.4469078855032852E-4 0.0 0.0 6.1440049542126 0.0 22 1.4469078855032852E-4 0.0 0.0 6.318067972838645 0.0 23 1.4469078855032852E-4 0.0 0.0 6.502548728240314 0.0 24 1.4469078855032852E-4 0.0 0.0 6.646660753636441 0.0 25 1.4469078855032852E-4 0.0 0.0 6.784261693547804 0.0 26 1.4469078855032852E-4 0.0 0.0 6.9250458308072735 0.0 27 1.4469078855032852E-4 0.0 0.0 7.066408731220944 0.0 28 1.4469078855032852E-4 0.0 0.0 7.218044677621688 0.0 29 1.4469078855032852E-4 0.0 0.0 7.363458920114769 0.0 30 1.4469078855032852E-4 0.0 0.0 7.540994517666022 0.0 31 1.4469078855032852E-4 0.0 0.0 7.70782299686455 0.0 32 1.4469078855032852E-4 0.0 0.0 7.8630762129790535 0.0 33 1.4469078855032852E-4 0.0 0.0 8.032364435582938 0.0 34 1.4469078855032852E-4 0.0 0.0 8.214819519944902 0.0 35 1.4469078855032852E-4 0.0 0.0 8.400457801654973 0.0 36 1.4469078855032852E-4 0.0 0.0 8.620387800251473 0.0 37 1.4469078855032852E-4 0.0 0.0 8.82613810157004 0.0 38 2.8938157710065704E-4 0.0 0.0 9.072257132894148 0.0 39 2.8938157710065704E-4 0.0 0.0 9.359613038955102 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGTC 110 0.0 45.0 16 GCGATTA 85 0.0 45.0 9 ACCACGC 20 7.0313324E-4 45.0 26 CGGTCTA 110 0.0 45.0 31 GCGTAAG 30 2.1642409E-6 44.999996 1 TACGTAG 30 2.1642409E-6 44.999996 1 CGTTTTT 7050 0.0 43.531918 1 ACGGTCT 115 0.0 43.043476 30 TCACGAC 120 0.0 41.249996 25 TACGGGT 55 6.002665E-11 40.909092 4 TAGGGAT 875 0.0 39.600002 5 TGCGTCT 125 0.0 39.6 17 GTAGGGA 900 0.0 39.0 4 CACGACG 140 0.0 38.571426 26 CGAGGGA 350 0.0 38.571426 4 TATCGCG 35 6.2446743E-6 38.571426 1 TAGGGAC 660 0.0 38.522728 5 AAGGGAC 760 0.0 38.486843 5 AGGGATT 1015 0.0 38.349754 6 TAGGGAG 640 0.0 38.320312 5 >>END_MODULE