SRR1547533_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547533_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	358910
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8076	2.2501462762252378	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTT	420	0.11702098019001979	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCT	377	0.10504026078961298	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCAG	25	3.8854254E-5	45.000004	40
TTCGTGG	25	3.8854254E-5	45.000004	2
CGACAGG	30	2.1613141E-6	45.000004	2
ATCGTGA	25	3.8854254E-5	45.000004	30
CTACGGG	25	3.8854254E-5	45.000004	3
CGCAGTG	25	3.8854254E-5	45.000004	42
TCGTAAG	30	2.1613141E-6	45.000004	1
ACGTAAG	25	3.8854254E-5	45.000004	1
GTACGAG	30	2.1613141E-6	45.000004	1
TCACGAC	45	3.8380676E-10	45.0	25
TCGTTCA	20	7.0267974E-4	45.0	16
GCGACGG	45	3.8380676E-10	45.0	37
GCGACCT	20	7.0267974E-4	45.0	11
ATGATCG	20	7.0267974E-4	45.0	27
CACGGCC	20	7.0267974E-4	45.0	44
CGACGGT	45	3.8380676E-10	45.0	28
GCGCGAC	20	7.0267974E-4	45.0	9
CGCATGG	35	1.2088094E-7	45.0	2
ATCAGCG	20	7.0267974E-4	45.0	1
CCAATCG	45	3.8380676E-10	45.0	24