##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547529_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 798888 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.411439400767065 31.0 31.0 33.0 30.0 34.0 2 31.83100384534503 31.0 31.0 34.0 30.0 34.0 3 31.993259380538948 33.0 31.0 34.0 30.0 34.0 4 35.70060634281651 37.0 35.0 37.0 33.0 37.0 5 35.60848329177557 37.0 35.0 37.0 33.0 37.0 6 35.660599483281764 37.0 35.0 37.0 33.0 37.0 7 35.96300357496921 37.0 35.0 37.0 35.0 37.0 8 35.89917986000541 37.0 35.0 37.0 35.0 37.0 9 37.56481384123932 39.0 37.0 39.0 35.0 39.0 10 37.178080031243425 39.0 37.0 39.0 33.0 39.0 11 36.87955382982346 39.0 37.0 39.0 33.0 39.0 12 36.1857769800022 38.0 35.0 39.0 32.0 39.0 13 35.8695086169776 38.0 35.0 39.0 31.0 39.0 14 36.93187405493636 39.0 35.0 41.0 31.0 41.0 15 37.20123096103584 39.0 35.0 41.0 32.0 41.0 16 37.30931870299717 39.0 35.0 41.0 33.0 41.0 17 37.202675468901774 39.0 35.0 41.0 32.0 41.0 18 37.18228462562963 39.0 35.0 41.0 32.0 41.0 19 37.14735983016393 39.0 35.0 41.0 32.0 41.0 20 37.036981404151774 38.0 35.0 41.0 32.0 41.0 21 36.88201349876328 38.0 35.0 41.0 32.0 41.0 22 36.792718128198196 38.0 35.0 41.0 31.0 41.0 23 36.728283564154175 38.0 35.0 41.0 31.0 41.0 24 36.67326333603709 38.0 35.0 41.0 31.0 41.0 25 36.59006268713512 38.0 35.0 40.0 31.0 41.0 26 36.571615795956376 38.0 35.0 40.0 31.0 41.0 27 36.540585163377095 38.0 35.0 40.0 31.0 41.0 28 36.50297663752616 38.0 35.0 40.0 31.0 41.0 29 36.486429887543686 38.0 35.0 40.0 31.0 41.0 30 36.438171558466266 38.0 35.0 40.0 31.0 41.0 31 36.31109367020158 38.0 35.0 40.0 31.0 41.0 32 36.15086345019577 38.0 35.0 40.0 30.0 41.0 33 36.05718573817607 38.0 35.0 40.0 30.0 41.0 34 35.98922877800142 38.0 35.0 40.0 30.0 41.0 35 35.90207888965662 38.0 35.0 40.0 30.0 41.0 36 35.80007710717898 38.0 35.0 40.0 30.0 41.0 37 35.73291375011266 38.0 35.0 40.0 29.0 41.0 38 35.62618664944272 38.0 34.0 40.0 29.0 41.0 39 35.59478425010765 38.0 35.0 40.0 29.0 41.0 40 35.484198035269024 38.0 34.0 40.0 28.0 41.0 41 35.4816232062567 37.0 34.0 40.0 29.0 41.0 42 35.436559317451255 37.0 34.0 40.0 28.0 41.0 43 35.37014825607594 37.0 34.0 40.0 28.0 41.0 44 35.22412528414496 37.0 34.0 40.0 28.0 41.0 45 35.1567291034538 37.0 34.0 40.0 27.0 41.0 46 35.1175246092068 37.0 34.0 40.0 27.0 41.0 47 35.07027142728393 37.0 34.0 40.0 27.0 41.0 48 35.001553409238845 36.0 34.0 40.0 27.0 41.0 49 34.94683860566187 36.0 34.0 40.0 27.0 41.0 50 34.82403791269865 36.0 34.0 40.0 27.0 41.0 51 34.386359539760264 35.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 6.0 14 11.0 15 17.0 16 57.0 17 147.0 18 288.0 19 639.0 20 1028.0 21 1657.0 22 2580.0 23 3597.0 24 5266.0 25 7380.0 26 9603.0 27 11871.0 28 13344.0 29 15857.0 30 18835.0 31 23319.0 32 29112.0 33 37854.0 34 68890.0 35 109587.0 36 53639.0 37 69210.0 38 106897.0 39 208105.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.13718568810647 24.509568299936912 29.13599903866374 13.217246973292877 2 29.816945554320505 26.87798539970559 30.68477683980733 12.620292206166573 3 30.508782207268105 25.210793002273157 31.0830804818698 13.197344308588937 4 27.06186599373129 28.47220135989025 29.799296021469846 14.666636624908621 5 24.140680545958883 33.56077447652236 28.36104685512863 13.93749812239012 6 22.22777160252751 41.93353761728803 25.15796957771302 10.680721202471435 7 88.05064039014229 4.5798660137591245 5.5833859064099105 1.7861076896886672 8 88.15215649753156 4.537306856530578 5.24554130241035 2.0649953435275035 9 83.55439060293808 7.044041217292035 6.468491202771853 2.933076976998027 10 46.70529536055116 32.5557524959694 11.466062827329988 9.272889316149447 11 40.70082414556233 22.01560168634402 22.89044271537437 14.39313145271928 12 37.75047315768919 21.698661138983187 24.856049909374033 15.694815793953595 13 24.172349565896596 35.3450045563333 23.85490832256837 16.62773755520173 14 16.854177306455973 37.84460399955939 27.112686634421845 18.188532059562792 15 16.326819278797526 28.091547250678445 40.14930753747709 15.432325933046936 16 20.461191055567237 23.880944512872894 38.20673235797759 17.45113207358228 17 18.909158730635582 24.200013018095152 27.64405022981945 29.246778021449813 18 21.951011906550104 26.931810216200518 31.236668969868113 19.880508907381262 19 26.84218563803687 27.847708314557234 25.370139493896517 19.93996655350938 20 29.40987973282863 26.527498222529317 25.962713171308117 18.099908873333934 21 24.154700033045934 28.73894713651976 28.3781956920119 18.728157138422407 22 23.885701124563145 24.73100109151721 27.663076676580445 23.7202211073392 23 20.219104555331914 29.697404392105025 26.74142057459869 23.34207047796437 24 20.51000891238822 26.465411922572375 34.552778361923075 18.47180080311633 25 19.960620262164408 27.948723725979114 31.023873183725375 21.066782828131103 26 17.877224341835152 35.53276554410631 26.104660478064513 20.485349635994034 27 18.918671954016084 33.40405663872783 28.857862428776 18.819408978480087 28 16.996625309179763 29.794539409779592 34.99339081323039 18.215444467810258 29 18.303066262104327 26.750307928019947 34.01315328306346 20.93347252681227 30 18.957100369513626 31.485890387638815 29.49161834950581 20.065390893341746 31 27.195927339001212 28.214092588698293 25.123922251930182 19.466057820370313 32 27.41247834489941 29.204469212204963 25.778457055306873 17.60459538758875 33 25.680821341664917 29.91433091997877 24.116772313515785 20.288075424840528 34 20.044111314727473 30.25242587196203 27.774231181342063 21.929231631968435 35 21.74147064419543 27.075259610859092 29.4787254283454 21.704544316600074 36 26.413339541963328 28.38470473958803 26.578694385195423 18.62326133325322 37 20.97640720601636 32.14693423859164 28.27329988684271 18.603358668549284 38 20.56583651275273 32.273735492334346 25.359624878581226 21.8008031163317 39 21.46971790789197 30.152662200458636 26.787860125574547 21.589759766074845 40 22.95741080101341 27.597861026827292 26.615745886782626 22.82898228537667 41 18.148851904146763 27.007665655260816 28.18380048267091 26.65968195792151 42 22.38611670221608 27.949975465897598 24.464881184846938 25.199026647039386 43 23.359845184806883 26.85157368742552 26.308819258769688 23.479761868997905 44 20.02095412623547 31.445459188271695 26.931184346241277 21.602402339251558 45 19.57258088743353 34.62149888344799 24.41105636835201 21.394863860766467 46 22.216380769269286 32.21840858793723 25.63951392435485 19.92569671843863 47 21.457826378666347 28.67323079079921 27.22859775087371 22.64034507966073 48 22.316895484723766 26.117928921200466 30.12049248455353 21.444683109522238 49 22.098592042939686 25.298414796567226 30.09107659646909 22.51191656402399 50 20.0367260492084 30.319268783609214 28.809420093930566 20.834585073251823 51 19.844208449745146 30.729964650864698 26.004521284585575 23.421305614804577 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1054.0 1 1495.0 2 1936.0 3 3711.0 4 5486.0 5 4000.0 6 2514.0 7 2520.5 8 2527.0 9 2726.0 10 2925.0 11 2994.0 12 3063.0 13 3080.5 14 3098.0 15 2853.0 16 2608.0 17 2544.0 18 2480.0 19 2513.5 20 2547.0 21 2785.0 22 3023.0 23 3118.5 24 3214.0 25 4817.0 26 7737.0 27 9054.0 28 10565.0 29 12076.0 30 14463.5 31 16851.0 32 18888.0 33 20925.0 34 22314.5 35 23704.0 36 25448.5 37 27193.0 38 30757.0 39 34321.0 40 43481.5 41 52642.0 42 61532.0 43 70422.0 44 73029.0 45 75636.0 46 74203.0 47 72770.0 48 70038.5 49 67307.0 50 62524.0 51 57741.0 52 51382.5 53 45024.0 54 41579.0 55 38134.0 56 35553.5 57 32973.0 58 30409.0 59 27845.0 60 26516.0 61 25187.0 62 20888.0 63 16589.0 64 14006.0 65 11423.0 66 9199.5 67 6976.0 68 5411.5 69 3847.0 70 3334.0 71 2821.0 72 2328.5 73 1836.0 74 1498.0 75 939.5 76 719.0 77 571.0 78 423.0 79 316.0 80 209.0 81 155.5 82 102.0 83 63.5 84 25.0 85 35.5 86 46.0 87 25.0 88 4.0 89 4.0 90 4.0 91 4.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 798888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.704615324727957 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96029203547221 14.769218884516883 2 7.591310218024712 2.839850748776579 3 2.4419477283947275 1.3702707870814996 4 1.2261858096701317 0.9174133554607962 5 0.7417832921606451 0.693738556708758 6 0.4873766253416382 0.5469715377167642 7 0.3882058701290475 0.5082869027295595 8 0.32299106066027605 0.483313883438107 9 0.2715414199679669 0.4571170024708101 >10 4.272794484727409 20.842898571712066 >50 2.2879910022682006 31.423348386564697 >100 1.002177877026567 23.929249840221694 >500 0.0033766100977984065 0.42480200598960904 >1k 0.0020259660586790444 0.7935195366121689 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3116 0.39004215860045466 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2013 0.251975245591372 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1153 0.1443256126015161 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 799 0.10001401948708706 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2517399184866965E-4 0.0 0.0 0.08486796647339802 0.0 2 1.2517399184866965E-4 0.0 0.0 0.23032014500155215 0.0 3 1.2517399184866965E-4 0.0 0.0 0.3320866003745206 0.0 4 1.2517399184866965E-4 0.0 0.0 0.5170937603268543 0.0 5 1.2517399184866965E-4 0.0 0.0 0.8195141246332402 0.0 6 1.2517399184866965E-4 0.0 0.0 1.1485965492033927 0.0 7 1.2517399184866965E-4 0.0 0.0 1.3363575369763971 0.0 8 1.2517399184866965E-4 0.0 0.0 1.7969978269795015 0.0 9 1.2517399184866965E-4 0.0 0.0 1.9314346942249727 0.0 10 1.2517399184866965E-4 0.0 0.0 2.19893151480558 0.0 11 1.2517399184866965E-4 0.0 0.0 2.61663712560459 0.0 12 1.2517399184866965E-4 0.0 0.0 2.9682508687075035 0.0 13 1.2517399184866965E-4 0.0 0.0 3.1133275252601114 0.0 14 1.2517399184866965E-4 0.0 0.0 3.1671523417550396 0.0 15 2.503479836973393E-4 0.0 0.0 3.2546489620572596 0.0 16 2.503479836973393E-4 0.0 0.0 3.453800783088493 0.0 17 2.503479836973393E-4 0.0 0.0 3.6946355434053335 0.0 18 2.503479836973393E-4 0.0 0.0 3.9830364206246682 0.0 19 2.503479836973393E-4 0.0 0.0 4.1398794324110515 0.0 20 2.503479836973393E-4 0.0 0.0 4.300853185928441 0.0 21 2.503479836973393E-4 0.0 0.0 4.493245611399845 0.0 22 2.503479836973393E-4 0.0 0.0 4.687014950781586 0.0 23 2.503479836973393E-4 0.0 0.0 4.896681387128108 0.0 24 2.503479836973393E-4 0.0 0.0 5.06867045192818 0.0 25 2.503479836973393E-4 0.0 0.0 5.216500936301459 0.0 26 2.503479836973393E-4 0.0 0.0 5.3556944152371795 0.0 27 2.503479836973393E-4 0.0 0.0 5.488128498613072 0.0 28 2.503479836973393E-4 0.0 0.0 5.633705851133075 0.0 29 2.503479836973393E-4 0.0 0.0 5.8071970038353316 0.0 30 2.503479836973393E-4 0.0 0.0 5.993080381730605 0.0 31 2.503479836973393E-4 0.0 0.0 6.183470023332432 0.0 32 2.503479836973393E-4 0.0 0.0 6.35395700023032 0.0 33 2.503479836973393E-4 0.0 0.0 6.521314627331991 0.0 34 2.503479836973393E-4 0.0 0.0 6.697058911887524 0.0 35 2.503479836973393E-4 0.0 0.0 6.9044722163807695 0.0 36 2.503479836973393E-4 0.0 0.0 7.093109422096714 0.0 37 2.503479836973393E-4 0.0 0.0 7.296141636875257 0.0 38 2.503479836973393E-4 0.0 0.0 7.486656452468932 0.0 39 2.503479836973393E-4 0.0 0.0 7.687310361402349 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGTA 25 3.8897328E-5 45.000004 32 ACGCACT 25 3.8897328E-5 45.000004 24 CGACCCA 25 3.8897328E-5 45.000004 20 CGACAGG 60 0.0 45.000004 2 TTATCCG 25 3.8897328E-5 45.000004 1 CCCGTTG 30 2.1646665E-6 45.000004 20 TACGCCC 30 2.1646665E-6 45.000004 34 AGGTTCG 30 2.1646665E-6 45.000004 43 TATTACG 30 2.1646665E-6 45.000004 30 TTGAACG 25 3.8897328E-5 45.000004 34 TAAGGTC 25 3.8897328E-5 45.000004 43 CGCACTC 25 3.8897328E-5 45.000004 25 ACGTACG 25 3.8897328E-5 45.000004 38 TATACGA 25 3.8897328E-5 45.000004 31 TGTACGT 25 3.8897328E-5 45.000004 19 TAATGCG 50 2.1827873E-11 45.000004 1 ATCGCGC 25 3.8897328E-5 45.000004 10 TGCGTAG 60 0.0 45.000004 1 CTTACCG 25 3.8897328E-5 45.000004 22 AAGTACG 20 7.031994E-4 45.0 1 >>END_MODULE