##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547528_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4574463 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.406528154233623 31.0 31.0 33.0 30.0 34.0 2 31.83254668362166 31.0 31.0 34.0 30.0 34.0 3 31.959598755088848 33.0 31.0 34.0 30.0 34.0 4 35.700363080868726 37.0 35.0 37.0 33.0 37.0 5 35.61243363428669 37.0 35.0 37.0 33.0 37.0 6 35.6533877309752 37.0 35.0 37.0 33.0 37.0 7 35.979752377492176 37.0 35.0 37.0 35.0 37.0 8 35.92782125464781 37.0 35.0 37.0 35.0 37.0 9 37.57414629870217 39.0 37.0 39.0 35.0 39.0 10 37.14792512257723 39.0 37.0 39.0 33.0 39.0 11 36.92168632689783 39.0 37.0 39.0 33.0 39.0 12 36.53875263610177 39.0 35.0 39.0 32.0 39.0 13 36.40236460541926 39.0 35.0 39.0 32.0 39.0 14 37.44663471974743 40.0 36.0 41.0 32.0 41.0 15 37.649790806046525 40.0 36.0 41.0 32.0 41.0 16 37.71244843383803 40.0 36.0 41.0 33.0 41.0 17 37.638149002407495 40.0 36.0 41.0 32.0 41.0 18 37.53037176166907 39.0 36.0 41.0 32.0 41.0 19 37.50035512365058 39.0 36.0 41.0 32.0 41.0 20 37.39026373150247 39.0 35.0 41.0 32.0 41.0 21 37.270203081760634 39.0 35.0 41.0 32.0 41.0 22 37.23065964245421 39.0 35.0 41.0 32.0 41.0 23 37.160478071415156 39.0 35.0 41.0 32.0 41.0 24 37.09467581222102 39.0 35.0 41.0 32.0 41.0 25 36.99220586110326 39.0 35.0 41.0 31.0 41.0 26 36.99811650023183 39.0 35.0 41.0 31.0 41.0 27 36.96079364944038 39.0 35.0 41.0 31.0 41.0 28 36.902513584654635 39.0 35.0 41.0 31.0 41.0 29 36.853494279000614 39.0 35.0 41.0 31.0 41.0 30 36.757693744599095 39.0 35.0 41.0 31.0 41.0 31 36.608111596924054 39.0 35.0 41.0 30.0 41.0 32 36.46990062002906 39.0 35.0 41.0 30.0 41.0 33 36.331768559500865 39.0 35.0 41.0 30.0 41.0 34 36.20656588543836 39.0 35.0 41.0 30.0 41.0 35 36.0912719154139 39.0 35.0 41.0 29.0 41.0 36 36.016427283377304 39.0 35.0 41.0 29.0 41.0 37 35.95757491097862 39.0 35.0 41.0 29.0 41.0 38 35.828526539617876 38.0 35.0 41.0 28.0 41.0 39 35.75331508856887 38.0 35.0 41.0 28.0 41.0 40 35.65879995094506 38.0 35.0 41.0 27.0 41.0 41 35.594446823594375 38.0 35.0 40.0 27.0 41.0 42 35.57379784250086 38.0 35.0 40.0 27.0 41.0 43 35.539874953628434 38.0 35.0 40.0 27.0 41.0 44 35.439602856116664 38.0 34.0 40.0 27.0 41.0 45 35.37580126891397 38.0 34.0 40.0 27.0 41.0 46 35.36099188035842 38.0 34.0 40.0 27.0 41.0 47 35.30835663114993 38.0 34.0 40.0 27.0 41.0 48 35.20761562614016 38.0 34.0 40.0 26.0 41.0 49 35.127073057537025 38.0 34.0 40.0 26.0 41.0 50 35.024118240764 37.0 34.0 40.0 26.0 41.0 51 34.5951432987872 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 9.0 11 9.0 12 17.0 13 19.0 14 47.0 15 147.0 16 348.0 17 886.0 18 1861.0 19 3667.0 20 6173.0 21 9638.0 22 14802.0 23 21503.0 24 31739.0 25 46518.0 26 60872.0 27 71313.0 28 78375.0 29 88078.0 30 102965.0 31 124848.0 32 153830.0 33 198630.0 34 318186.0 35 424145.0 36 329453.0 37 437921.0 38 688687.0 39 1359373.0 40 399.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.02140600984203 23.6478904737015 29.14696216801841 14.183741348438057 2 31.713361765085867 24.776175913981596 29.869210877866976 13.641251443065558 3 29.644091557850615 24.14742451736958 32.54620269089508 13.662281233884721 4 26.82181493215706 26.98594348669997 31.339919024375103 14.852322556767867 5 24.486896057526312 31.390416754928392 29.52630724087177 14.59637994667352 6 22.78676207458668 40.8086369919267 26.094407146806088 10.310193786680536 7 87.0290786044176 3.668430589557725 7.295522993627886 2.0069678123967774 8 87.28217935088774 3.0705462040025244 7.438053384626786 2.209221060482946 9 81.71026850583335 6.156897541853547 8.955608559955563 3.177225392357529 10 39.375572608194666 36.39485115520663 14.471797017485988 9.757779219112713 11 30.886991544144088 23.030178624245075 29.105492819594343 16.97733701201649 12 29.304095365947873 21.64767755253458 31.162543013245493 17.885684068272056 13 24.889129062799284 24.778908475158723 31.074620124810277 19.257342337231716 14 18.13373504168686 29.725631183376063 32.83607278056462 19.304560994372455 15 17.697071765582102 27.626368384660672 37.49769098580533 17.178868863951898 16 23.840678129870106 25.56575493123455 33.80707199948934 16.786494939406 17 23.403512062508756 24.661014855732795 29.72847304700027 22.207000034758178 18 23.035709328067576 25.771483997138024 32.23289815657051 18.959908518223887 19 24.762228921733545 27.360894601180508 28.903436315912927 18.973440161173016 20 25.526537213220436 27.57036181077429 28.790439446116405 18.11266152988886 21 24.785532203452078 25.349970040199253 32.386839723045085 17.47765803330358 22 23.228759310109186 22.271488478538355 32.64490280061288 21.854849410739575 23 20.341185402527028 26.185324922291425 32.22765163911043 21.24583803607112 24 20.519129786381484 26.494366661179686 33.41023853510237 19.57626501733646 25 21.082583901104897 27.839333272561174 30.481654349373905 20.59642847696003 26 20.61651826673426 30.281674592187102 27.943017573866047 21.158789567212587 27 19.24538464952061 29.42703875842913 31.987098813565655 19.340477778484598 28 18.509320110360495 27.898378454476514 33.327890071468495 20.264411363694492 29 19.91302585680549 26.11386298238722 33.20588668003217 20.76722448077512 30 21.09782066222855 26.722699473140345 32.30875405484753 19.870725809783572 31 23.33911106068625 26.04428104457288 30.16633865002297 20.450269244717905 32 24.230647400580132 26.644701246900453 29.361763337029945 19.76288801548947 33 23.67978492776092 26.542853226706608 29.163095209208162 20.61426663632431 34 20.106884676955524 27.730424314285635 31.182982570850392 20.97970843790845 35 21.087917860522644 27.624291638166053 30.364831893929406 20.922958607381894 36 23.829726024672183 27.226867940564826 29.19503338424641 19.748372650516576 37 21.317999511636668 29.609027332825733 29.286956742244936 19.786016413292664 38 22.652582390545074 29.32112468720372 27.4241151365745 20.6021777856767 39 21.40349588574659 27.836994200193555 28.606089938862766 22.15341997519709 40 22.667207057965054 26.87030149768399 29.27182928356837 21.19066216078259 41 20.649221558902106 26.303983658846953 29.508075592697985 23.53871918955296 42 21.31093857355497 27.761247604363614 28.694996549321743 22.232817272759668 43 21.302150656809335 26.871175917260672 29.857887144348965 21.96878628158103 44 21.461469903680495 27.828446748831503 29.404456872861363 21.305626474626642 45 20.243403433364744 29.013853647958243 28.209584381817056 22.533158536859954 46 21.541085806137243 28.11094985356751 28.90350189738118 21.444462442914062 47 20.671213211255616 27.722707561521432 30.2612350345822 21.344844192640757 48 21.255872000713527 27.55376969930678 29.892623462032592 21.2977348379471 49 21.71179436799467 26.55242812107126 30.29288902325803 21.44288848767604 50 20.4117073413863 28.310689145370727 29.351729372387535 21.925874140855438 51 19.590321312031598 28.676939785063293 29.248504141360414 22.484234761544688 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3720.0 1 6032.5 2 8345.0 3 29962.0 4 51579.0 5 36033.0 6 20487.0 7 20089.0 8 19691.0 9 20580.5 10 21470.0 11 21641.5 12 21813.0 13 21592.5 14 21372.0 15 20185.0 16 18998.0 17 19584.0 18 20170.0 19 20394.5 20 20619.0 21 22930.5 22 25242.0 23 30068.5 24 34895.0 25 37825.0 26 50154.5 27 59554.0 28 70026.5 29 80499.0 30 92733.0 31 104967.0 32 123480.0 33 141993.0 34 151962.0 35 161931.0 36 177638.5 37 193346.0 38 206128.0 39 218910.0 40 240198.5 41 261487.0 42 285496.0 43 309505.0 44 320764.0 45 332023.0 46 342464.0 47 352905.0 48 355790.0 49 358675.0 50 345937.0 51 333199.0 52 305493.5 53 277788.0 54 255771.5 55 233755.0 56 223591.0 57 213427.0 58 196819.5 59 180212.0 60 158651.0 61 137090.0 62 118976.5 63 100863.0 64 84120.0 65 67377.0 66 56512.5 67 45648.0 68 38565.5 69 31483.0 70 25525.0 71 19567.0 72 16107.0 73 12647.0 74 10332.0 75 6097.0 76 4177.0 77 3039.5 78 1902.0 79 1636.0 80 1370.0 81 1026.0 82 682.0 83 435.5 84 189.0 85 122.0 86 55.0 87 46.0 88 37.0 89 25.0 90 13.0 91 10.5 92 8.0 93 5.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4574463.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.723879453229317 #Duplication Level Percentage of deduplicated Percentage of total 1 77.60226453576365 12.202086528579601 2 8.972332913972677 2.8215976230709616 3 3.385809853291566 1.5971419795413788 4 1.6553606006511516 1.0411476214505593 5 0.9353993391640981 0.7354053224823323 6 0.643178160616014 0.6067953518685579 7 0.49498592082937676 0.5448169265116781 8 0.3466487195010341 0.4360530142440451 9 0.2721779821691166 0.3851724403305349 >10 2.663331450966888 9.553520371612644 >50 1.115393745398237 12.906334409056516 >100 1.9012645106884611 54.68255095920681 >500 0.008324806574790022 0.9060599725640356 >1k 0.0033863619965247547 0.8678332448594435 >5k 0.0 0.0 >10k+ 1.4109841652186478E-4 0.7134842346209951 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32159 0.7030114791615977 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.558146825102749E-5 0.0 0.0 0.05615959731229655 0.0 2 6.558146825102749E-5 0.0 0.0 0.1493290032075896 0.0 3 6.558146825102749E-5 0.0 0.0 0.22044117528112042 0.0 4 6.558146825102749E-5 0.0 0.0 0.32423477903307996 0.0 5 6.558146825102749E-5 0.0 0.0 0.553310847633919 0.0 6 8.744195766803666E-5 0.0 0.0 0.8160302094475351 0.0 7 8.744195766803666E-5 0.0 0.0 0.9978438999288004 0.0 8 8.744195766803666E-5 0.0 0.0 1.388337822384835 0.0 9 8.744195766803666E-5 0.0 0.0 1.5563138230651334 0.0 10 8.744195766803666E-5 0.0 0.0 1.833832736214065 0.0 11 8.744195766803666E-5 0.0 0.0 2.1836005668862115 0.0 12 8.744195766803666E-5 0.0 0.0 2.4689892562252664 0.0 13 8.744195766803666E-5 0.0 0.0 2.5888065987198936 0.0 14 8.744195766803666E-5 0.0 0.0 2.649709922235681 0.0 15 8.744195766803666E-5 0.0 0.0 2.7268993103671404 0.0 16 8.744195766803666E-5 0.0 0.0 2.871069238072316 0.0 17 8.744195766803666E-5 0.0 0.0 3.0518336250615645 0.0 18 8.744195766803666E-5 0.0 0.0 3.2668971199461008 0.0 19 8.744195766803666E-5 0.0 0.0 3.415067517214589 0.0 20 8.744195766803666E-5 0.0 0.0 3.572856529826561 0.0 21 8.744195766803666E-5 0.0 0.0 3.75851766644522 0.0 22 8.744195766803666E-5 0.0 0.0 3.9697555756817793 0.0 23 8.744195766803666E-5 0.0 0.0 4.183507441201295 0.0 24 8.744195766803666E-5 0.0 0.0 4.34551552827075 0.0 25 3.93488809506165E-4 0.0 0.0 4.48870173395216 0.0 26 3.93488809506165E-4 0.0 0.0 4.630357705374379 0.0 27 3.93488809506165E-4 0.0 0.0 4.788015555049849 0.0 28 3.93488809506165E-4 0.0 0.0 4.952909226722349 0.0 29 3.93488809506165E-4 0.0 0.0 5.153129449292737 0.0 30 4.1534929892317416E-4 0.0 0.0 5.376237604282732 0.0 31 4.1534929892317416E-4 0.0 0.0 5.575015034551597 0.0 32 4.1534929892317416E-4 0.0 0.0 5.759430123273486 0.0 33 4.1534929892317416E-4 0.0 0.0 5.946337307788914 0.0 34 4.1534929892317416E-4 0.0 0.0 6.148634276853917 0.0 35 4.1534929892317416E-4 0.0 0.0 6.3679387066853534 0.0 36 4.1534929892317416E-4 0.0 0.0 6.5749138204855955 0.0 37 4.1534929892317416E-4 0.0 0.0 6.79883081358402 0.0 38 4.1534929892317416E-4 0.0 0.0 7.050641791178549 0.0 39 4.1534929892317416E-4 0.0 0.0 7.480572036542869 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGATA 25 3.892636E-5 45.0 27 GCCCGTA 30 2.1669275E-6 44.999996 19 CGTAAGG 625 0.0 42.120003 2 CGTTTTT 16775 0.0 41.231 1 CACGACG 985 0.0 40.6599 26 TCGTTAG 155 0.0 40.64516 1 TCACGAC 990 0.0 40.454544 25 CGACGGT 990 0.0 40.227272 28 CGGTCTA 1005 0.0 39.850746 31 TCGATTG 140 0.0 38.571426 1 GCGTAAG 370 0.0 38.31081 1 CGAGGGA 3285 0.0 38.0137 4 GCGGGAT 3325 0.0 37.962406 5 CGTTAGG 630 0.0 37.85714 2 AGGGATT 10100 0.0 37.759903 6 ATAGGGA 6680 0.0 37.724552 4 TAGGGAC 4570 0.0 37.664112 5 ACGGTCT 1070 0.0 37.640186 30 TCGATAG 240 0.0 37.499996 1 AACGCGT 30 1.1404539E-4 37.499996 13 >>END_MODULE