SRR1547527_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547527_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2576239
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10767	0.41793482669892046	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4570	0.17739037410737124	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	4109	0.15949607159894716	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	3336	0.12949109147093885	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTAATC	90	0.0	45.000004	8
CTATACG	45	3.8562575E-10	45.000004	1
CCGGATA	30	2.1665546E-6	45.000004	20
CCGAATC	30	2.1665546E-6	45.000004	32
TATCGCG	30	2.1665546E-6	45.000004	1
AATACCG	30	2.1665546E-6	45.000004	1
AATCCCG	40	6.8212103E-9	45.0	35
ACCGGAT	35	1.2127202E-7	45.0	10
GTCGAAC	20	7.03492E-4	45.0	37
CATGCGT	20	7.03492E-4	45.0	14
TAGACGT	20	7.03492E-4	45.0	10
ACCGCGA	20	7.03492E-4	45.0	24
CCAATCG	35	1.2127202E-7	45.0	24
CATTACG	40	6.8212103E-9	45.0	28
CGCTCAC	20	7.03492E-4	45.0	22
AGCGCGA	40	6.8212103E-9	45.0	34
GACGATA	20	7.03492E-4	45.0	13
CGTCCCA	20	7.03492E-4	45.0	43
TATCGTG	20	7.03492E-4	45.0	1
CGATACA	35	1.2127202E-7	45.0	10