##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547527_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2576239 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.383723326911827 31.0 31.0 33.0 30.0 34.0 2 31.80280517451991 31.0 31.0 34.0 30.0 34.0 3 31.961335109048502 33.0 31.0 34.0 30.0 34.0 4 35.67325314149813 37.0 35.0 37.0 33.0 37.0 5 35.56356145528424 37.0 35.0 37.0 33.0 37.0 6 35.60361790967375 37.0 35.0 37.0 33.0 37.0 7 35.96454676759416 37.0 35.0 37.0 35.0 37.0 8 35.90854187053297 37.0 35.0 37.0 35.0 37.0 9 37.541094983811675 39.0 37.0 39.0 35.0 39.0 10 37.12336471887895 39.0 37.0 39.0 33.0 39.0 11 36.87069949643647 39.0 37.0 39.0 32.0 39.0 12 36.24479910443092 38.0 35.0 39.0 32.0 39.0 13 35.97041307114751 38.0 35.0 39.0 31.0 39.0 14 37.00726485392077 39.0 35.0 41.0 31.0 41.0 15 37.274125964244774 39.0 35.0 41.0 32.0 41.0 16 37.37310591136925 39.0 35.0 41.0 32.0 41.0 17 37.27658186992744 39.0 35.0 41.0 32.0 41.0 18 37.22577253119761 39.0 35.0 41.0 32.0 41.0 19 37.18993501767499 39.0 35.0 41.0 32.0 41.0 20 37.09486348122204 39.0 35.0 41.0 32.0 41.0 21 36.96485729778953 39.0 35.0 41.0 32.0 41.0 22 36.87387311503319 38.0 35.0 41.0 31.0 41.0 23 36.8376548138585 38.0 35.0 41.0 31.0 41.0 24 36.76760812952525 38.0 35.0 41.0 31.0 41.0 25 36.69255492211709 38.0 35.0 41.0 31.0 41.0 26 36.69993311955917 38.0 35.0 41.0 31.0 41.0 27 36.651600259137446 38.0 35.0 41.0 31.0 41.0 28 36.60188010506789 38.0 35.0 41.0 31.0 41.0 29 36.588112360693245 38.0 35.0 41.0 31.0 41.0 30 36.49967763084093 38.0 35.0 40.0 31.0 41.0 31 36.343034167249236 38.0 35.0 40.0 30.0 41.0 32 36.19777551694544 38.0 35.0 40.0 30.0 41.0 33 36.133518279942194 38.0 35.0 41.0 30.0 41.0 34 36.03865208158094 38.0 35.0 41.0 30.0 41.0 35 35.96985644577231 38.0 35.0 41.0 30.0 41.0 36 35.906524200588535 38.0 35.0 40.0 30.0 41.0 37 35.82737393541515 38.0 35.0 40.0 29.0 41.0 38 35.73380420061959 38.0 35.0 40.0 29.0 41.0 39 35.72052825844186 38.0 35.0 40.0 29.0 41.0 40 35.648105241788514 38.0 35.0 40.0 29.0 41.0 41 35.6152173769592 38.0 35.0 40.0 29.0 41.0 42 35.592061916615656 38.0 35.0 40.0 29.0 41.0 43 35.5159105968041 38.0 34.0 40.0 28.0 41.0 44 35.36235341519168 37.0 34.0 40.0 28.0 41.0 45 35.30222079550849 37.0 34.0 40.0 27.0 41.0 46 35.264172695157555 37.0 34.0 40.0 27.0 41.0 47 35.21998618916956 37.0 34.0 40.0 27.0 41.0 48 35.12774629993568 37.0 34.0 40.0 27.0 41.0 49 35.073203611931966 37.0 34.0 40.0 27.0 41.0 50 34.97762901656252 37.0 34.0 40.0 27.0 41.0 51 34.54907211636809 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 5.0 12 9.0 13 14.0 14 19.0 15 78.0 16 165.0 17 422.0 18 909.0 19 1754.0 20 3041.0 21 5057.0 22 7665.0 23 11314.0 24 16226.0 25 22840.0 26 31055.0 27 37607.0 28 43464.0 29 50770.0 30 61492.0 31 75850.0 32 93873.0 33 122528.0 34 214200.0 35 321502.0 36 178068.0 37 228886.0 38 354686.0 39 692450.0 40 289.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.844638637952453 24.81163432429988 29.413342473272085 13.93038456447558 2 29.635720909434255 26.692360452582232 30.245175234130063 13.426743403853447 3 29.4337210173435 25.69812039954368 31.68118330636249 13.186975276750331 4 28.166020311003752 27.51456677738362 29.878904868686483 14.440508042926142 5 24.667315415999834 32.56988190924833 28.284681661911026 14.47812101284081 6 23.20266093324416 40.94806421298645 24.71637918686892 11.13289566690047 7 87.46525458235823 4.29676749711498 6.133708867849606 2.1042690526771777 8 87.43854898555608 4.1541565048894915 5.736463115417475 2.670831394136957 9 81.68741331840718 7.238730568087822 7.684147317077336 3.389708796427661 10 44.036946882645594 33.52918731530731 12.621266893327832 9.812598908719261 11 37.942093105492155 22.24463646424109 24.13887065602221 15.674399774244549 12 35.169563072370224 21.365680746235114 26.231960621665923 17.232795559728736 13 23.99043722263346 31.974362627069926 26.65117638542076 17.384023764875852 14 16.62803800423796 35.89814454326636 29.341687630689545 18.132129821806128 15 16.42087554764911 27.500010674475465 40.23271909166812 15.846394686207296 16 20.33883502268229 24.104518253158965 37.9921660994962 17.56448062466254 17 19.95269072473478 24.040665481735196 27.423736695236737 28.582907098293287 18 22.151322140531214 27.836625406260833 29.661960710943358 20.350091742264595 19 25.960052619341607 28.11233740347848 27.045588549820103 18.882021427359806 20 28.011570355079634 26.66091927030062 26.251524023974483 19.075986350645262 21 24.55971670330276 27.419855067794565 29.132545544105188 18.88788268479749 22 21.990040520308867 24.270030847293285 29.157193878362992 24.582734754034856 23 20.314846565089653 27.842447847424097 28.23138691712997 23.611318670356283 24 20.575575480380508 25.64366116652997 34.165463685628545 19.615299667460977 25 20.223744769021817 27.00525844069591 30.569252309277207 22.20174448100506 26 18.41991368036894 33.222771645022064 26.793360398627613 21.56395427598138 27 20.299941115711704 31.102937266301765 28.73852154245006 19.85860007553647 28 16.817927218709134 29.1791638896857 34.856432186610014 19.14647670499515 29 19.313697215204023 26.338084315934974 33.73786360659861 20.61035486226239 30 20.74559076234775 28.377374925230153 30.75762768904593 20.11940662337617 31 26.787421508641085 27.002269587565443 25.887427369898525 20.322881533894954 32 26.95840719746887 28.514862169231968 26.51046739064194 18.01626324265722 33 25.04115495495565 29.546948089831726 25.664583138443287 19.747313816769328 34 20.50333839368164 28.919327748706547 29.59247957972843 20.98485427788338 35 20.953645993248298 27.835499734302598 28.89712483973731 22.313729432711792 36 25.80078944538919 27.127646153947673 28.230765856739225 18.840798543923913 37 20.902214429639486 30.678908284518634 29.678690525219125 18.740186760622755 38 20.411887251144012 31.251487148513785 25.531870296195347 22.80475530414686 39 21.000613685298607 29.12241449648111 28.01731516369405 21.85965665452623 40 22.08374300676296 27.28508496300227 28.355366097633024 22.27580593260175 41 17.852807911067256 26.930498296159634 29.098037876144257 26.118655916628853 42 22.53129465084567 27.9631276446013 25.60593174779203 23.899645956761 43 23.178245496632883 26.105186669404507 27.257564224437253 23.459003609525357 44 20.78254385559725 29.421299809528538 28.241052169460986 21.555104165413226 45 20.49728305487185 31.320696565807754 25.300641749465015 22.88137862985538 46 22.013019754766542 29.832597053301345 27.479709762952893 20.674673428979222 47 21.32930989710194 28.502673859063542 28.021041526038537 22.14697471779598 48 21.557743672073904 26.501733728897047 29.601213241473328 22.339309357555724 49 21.563372031865054 25.237021875687777 30.760888256097356 22.438717836349813 50 19.902307200535354 27.577216244300317 30.125504660087827 22.394971895076505 51 19.115850664476394 28.77318447550868 27.943486609743896 24.167478250271035 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3206.0 1 4397.5 2 5589.0 3 11971.0 4 18353.0 5 13215.0 6 8077.0 7 8055.5 8 8034.0 9 8700.0 10 9366.0 11 9599.5 12 9833.0 13 9564.0 14 9295.0 15 8896.0 16 8497.0 17 8657.5 18 8818.0 19 8623.0 20 8428.0 21 9681.0 22 10934.0 23 12111.5 24 13289.0 25 16574.5 26 23397.0 27 26934.0 28 33212.5 29 39491.0 30 46024.0 31 52557.0 32 60424.0 33 68291.0 34 68764.5 35 69238.0 36 77624.0 37 86010.0 38 98518.5 39 111027.0 40 135557.5 41 160088.0 42 194005.0 43 227922.0 44 241796.5 45 255671.0 46 252475.5 47 249280.0 48 229147.5 49 209015.0 50 188922.5 51 168830.0 52 156715.0 53 144600.0 54 133213.0 55 121826.0 56 114695.5 57 107565.0 58 103161.0 59 98757.0 60 91630.5 61 84504.0 62 71151.5 63 57799.0 64 47423.0 65 37047.0 66 30246.5 67 23446.0 68 18249.0 69 13052.0 70 10753.5 71 8455.0 72 6800.5 73 5146.0 74 4393.5 75 2833.5 76 2026.0 77 1654.5 78 1283.0 79 980.5 80 678.0 81 539.0 82 400.0 83 229.0 84 58.0 85 35.5 86 13.0 87 7.5 88 2.0 89 3.5 90 5.0 91 3.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2576239.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.362061852791545 #Duplication Level Percentage of deduplicated Percentage of total 1 74.75082741350693 11.483268342736393 2 10.598487818235844 3.256292508195935 3 4.16531206623488 1.9196334479303752 4 2.1106771972264533 1.2969741462027788 5 1.3158910218252013 1.0107399634405905 6 0.8641408719352632 0.796499131451684 7 0.5952405696818913 0.6400885714120863 8 0.4255601652843117 0.5229985264945431 9 0.3332423213662776 0.4607360237516934 >10 2.2170617660941696 7.173023828999625 >50 0.7535418907581433 8.568772464952987 >100 1.849298614625049 59.275834612279844 >500 0.01509109518901559 1.5165240481871634 >1k 0.005371406762191989 1.6555436642640178 >5k 0.0 0.0 >10k+ 2.5578127439009475E-4 0.423070719700251 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10767 0.41793482669892046 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4570 0.17739037410737124 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 4109 0.15949607159894716 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3336 0.12949109147093885 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.8816274421744256E-5 0.0 0.0 0.10414406427353984 0.0 2 3.8816274421744256E-5 0.0 0.0 0.3983714243903613 0.0 3 3.8816274421744256E-5 0.0 0.0 0.5909777780710563 0.0 4 3.8816274421744256E-5 0.0 0.0 0.9172673808602385 0.0 5 3.8816274421744256E-5 0.0 0.0 1.4973377858187846 0.0 6 3.8816274421744256E-5 0.0 0.0 2.0645988202181553 0.0 7 3.8816274421744256E-5 0.0 0.0 2.4011747357290996 0.0 8 3.8816274421744256E-5 0.0 0.0 3.229552848163544 0.0 9 3.8816274421744256E-5 0.0 0.0 3.4730473376111455 0.0 10 3.8816274421744256E-5 0.0 0.0 3.9294490922620144 0.0 11 3.8816274421744256E-5 0.0 0.0 4.599689702702273 0.0 12 3.8816274421744256E-5 0.0 0.0 5.158799319473077 0.0 13 3.8816274421744256E-5 0.0 0.0 5.37962510465838 0.0 14 3.8816274421744256E-5 0.0 0.0 5.469213066023766 0.0 15 3.8816274421744256E-5 0.0 0.0 5.613997769616872 0.0 16 3.8816274421744256E-5 0.0 0.0 5.927283920474769 0.0 17 3.8816274421744256E-5 0.0 0.0 6.2820258524150905 0.0 18 3.8816274421744256E-5 0.0 0.0 6.7524790984066305 0.0 19 3.8816274421744256E-5 0.0 0.0 7.0036592101897375 0.0 20 3.8816274421744256E-5 0.0 0.0 7.277702107607253 0.0 21 3.8816274421744256E-5 0.0 0.0 7.602128529224191 0.0 22 3.8816274421744256E-5 0.0 0.0 7.92791352044589 0.0 23 3.8816274421744256E-5 0.0 0.0 8.261888745570579 0.0 24 3.8816274421744256E-5 0.0 0.0 8.522928191056808 0.0 25 3.8816274421744256E-5 0.0 0.0 8.737388107236946 0.0 26 3.8816274421744256E-5 0.0 0.0 8.949014435384294 0.0 27 7.763254884348851E-5 0.0 0.0 9.153304487665935 0.0 28 7.763254884348851E-5 0.0 0.0 9.383679076358987 0.0 29 7.763254884348851E-5 0.0 0.0 9.618207006415165 0.0 30 7.763254884348851E-5 0.0 0.0 9.899353282051859 0.0 31 7.763254884348851E-5 0.0 0.0 10.172697486529783 0.0 32 7.763254884348851E-5 0.0 0.0 10.416191975977384 0.0 33 7.763254884348851E-5 0.0 0.0 10.666945108741851 0.0 34 7.763254884348851E-5 0.0 0.0 10.924297008158016 0.0 35 7.763254884348851E-5 0.0 0.0 11.215069719851302 0.0 36 7.763254884348851E-5 0.0 0.0 11.499981174106905 0.0 37 7.763254884348851E-5 0.0 0.0 11.791064415995566 0.0 38 7.763254884348851E-5 0.0 0.0 12.05909079087771 0.0 39 7.763254884348851E-5 0.0 0.0 12.364497238027994 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTAATC 90 0.0 45.000004 8 CTATACG 45 3.8562575E-10 45.000004 1 CCGGATA 30 2.1665546E-6 45.000004 20 CCGAATC 30 2.1665546E-6 45.000004 32 TATCGCG 30 2.1665546E-6 45.000004 1 AATACCG 30 2.1665546E-6 45.000004 1 AATCCCG 40 6.8212103E-9 45.0 35 ACCGGAT 35 1.2127202E-7 45.0 10 GTCGAAC 20 7.03492E-4 45.0 37 CATGCGT 20 7.03492E-4 45.0 14 TAGACGT 20 7.03492E-4 45.0 10 ACCGCGA 20 7.03492E-4 45.0 24 CCAATCG 35 1.2127202E-7 45.0 24 CATTACG 40 6.8212103E-9 45.0 28 CGCTCAC 20 7.03492E-4 45.0 22 AGCGCGA 40 6.8212103E-9 45.0 34 GACGATA 20 7.03492E-4 45.0 13 CGTCCCA 20 7.03492E-4 45.0 43 TATCGTG 20 7.03492E-4 45.0 1 CGATACA 35 1.2127202E-7 45.0 10 >>END_MODULE