##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547525_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3137577 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.534177487915038 31.0 31.0 33.0 30.0 34.0 2 31.952970078503252 31.0 31.0 34.0 30.0 34.0 3 31.962667689111694 33.0 31.0 34.0 30.0 34.0 4 35.718903472329124 37.0 35.0 37.0 33.0 37.0 5 35.66638428315863 37.0 35.0 37.0 33.0 37.0 6 35.72787281395803 37.0 35.0 37.0 33.0 37.0 7 36.10197582401962 37.0 35.0 37.0 35.0 37.0 8 36.11155550923531 37.0 35.0 37.0 35.0 37.0 9 37.94281765833954 39.0 38.0 39.0 35.0 39.0 10 37.396217527091764 39.0 37.0 39.0 35.0 39.0 11 37.05447738812466 39.0 37.0 39.0 33.0 39.0 12 36.56322059984504 39.0 35.0 39.0 33.0 39.0 13 36.33581964681664 39.0 35.0 39.0 32.0 39.0 14 37.299395998887036 40.0 35.0 41.0 32.0 41.0 15 37.49335235438047 40.0 35.0 41.0 32.0 41.0 16 37.60841917186415 40.0 35.0 41.0 33.0 41.0 17 37.57327804226 40.0 35.0 41.0 33.0 41.0 18 37.45760789296964 39.0 36.0 41.0 33.0 41.0 19 37.425583499624075 39.0 36.0 41.0 32.0 41.0 20 37.280634387618214 39.0 35.0 41.0 32.0 41.0 21 37.176137509932026 39.0 35.0 41.0 32.0 41.0 22 37.13262495231193 39.0 35.0 41.0 32.0 41.0 23 37.0418392919122 39.0 35.0 41.0 32.0 41.0 24 36.924765830448145 39.0 35.0 41.0 32.0 41.0 25 36.8336117328754 38.0 35.0 41.0 31.0 41.0 26 36.80386329960986 38.0 35.0 41.0 31.0 41.0 27 36.762896974321265 38.0 35.0 41.0 31.0 41.0 28 36.738681791713795 38.0 35.0 41.0 31.0 41.0 29 36.67788678971066 38.0 35.0 41.0 31.0 41.0 30 36.60816451675927 38.0 35.0 41.0 31.0 41.0 31 36.49718556707931 38.0 35.0 41.0 31.0 41.0 32 36.36500076332788 38.0 35.0 41.0 30.0 41.0 33 36.258511902656096 38.0 35.0 41.0 30.0 41.0 34 36.11833303214551 38.0 35.0 41.0 30.0 41.0 35 35.936098141973886 38.0 35.0 41.0 29.0 41.0 36 35.805173546338466 38.0 35.0 41.0 29.0 41.0 37 35.73637364118873 38.0 35.0 41.0 29.0 41.0 38 35.5615635887183 38.0 35.0 40.0 27.0 41.0 39 35.48368980267257 38.0 35.0 40.0 27.0 41.0 40 35.32715563633976 38.0 34.0 40.0 26.0 41.0 41 35.25156354728505 38.0 34.0 40.0 26.0 41.0 42 35.23086572855423 38.0 34.0 40.0 26.0 41.0 43 35.1338571133075 38.0 34.0 40.0 25.0 41.0 44 34.9930682179274 38.0 34.0 40.0 25.0 41.0 45 34.882592204111646 38.0 34.0 40.0 24.0 41.0 46 34.839303067303206 37.0 34.0 40.0 24.0 41.0 47 34.743887719727674 37.0 34.0 40.0 24.0 41.0 48 34.60218091858781 37.0 34.0 40.0 23.0 41.0 49 34.5220091809699 37.0 34.0 40.0 24.0 41.0 50 34.40283696623222 37.0 34.0 40.0 24.0 41.0 51 34.025047672136814 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 5.0 11 5.0 12 9.0 13 12.0 14 35.0 15 99.0 16 248.0 17 584.0 18 1235.0 19 2379.0 20 4266.0 21 6846.0 22 10437.0 23 15490.0 24 22908.0 25 33133.0 26 45321.0 27 52267.0 28 56541.0 29 62629.0 30 72477.0 31 87954.0 32 108900.0 33 140455.0 34 232239.0 35 352006.0 36 219637.0 37 281190.0 38 439825.0 39 888149.0 40 293.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.8371469449196 23.865167293105475 30.211561341761495 14.086124420213434 2 31.328346682806508 25.91260708502134 29.675160163399973 13.083886068772177 3 28.712665856487344 24.755121547614607 32.59649085902912 13.935721736868928 4 25.40441238573587 27.686173120213464 32.21313771741697 14.696276776633688 5 23.525032214348844 32.18649295300163 30.25579929990563 14.032675532743896 6 22.323149360159128 40.09507973828212 27.14189962509287 10.439871276465883 7 87.56049652327258 3.6316240207013246 7.064623433942817 1.7432560220832827 8 87.92479037167853 3.082091690498751 6.840820161545039 2.152297776277682 9 82.7659687714437 6.0133663651919935 8.263287243627806 2.9573776197365036 10 42.00148713481773 34.39874144921384 14.081853608692313 9.517917807276124 11 33.53734426278622 22.373825407312715 27.295648839853175 16.793181490047893 12 31.841704601990646 21.6444090455788 29.116002571411 17.39788378101956 13 25.24760348510969 28.790401000517278 29.116034443138766 16.845961071234267 14 17.753030443555648 32.372432612809185 31.574810753648435 18.299726189986732 15 16.474081751619163 28.245011994924745 38.759941190287925 16.520965063168173 16 21.358169058480478 26.62723496507018 35.7334975364748 16.28109843997454 17 21.797138365050483 25.806251129454356 29.03119190381622 23.36541860167894 18 22.108939477819987 27.5693313662103 31.451722141002435 18.870007014967282 19 25.620152111007954 28.55601631450001 27.3836466802249 18.440184894267137 20 25.725488171286315 29.792607480230764 27.500584049411376 16.981320299071545 21 23.38935426923387 27.815381104591218 31.702202049543327 17.093062576631585 22 22.542363103758092 24.299674557787746 31.02457724543493 22.133385093019232 23 19.613638167286414 28.267832152007742 31.257145242969337 20.861384437736508 24 18.98337475064357 28.0211768507992 34.48810977387966 18.507338624677576 25 20.180253743573466 29.48386605332714 30.774543541082817 19.561336662016583 26 18.983565981010187 32.80968084607964 27.698539350588046 20.50821382232213 27 18.342816765931165 32.077842233035234 30.97412430037574 18.605216700657863 28 17.09886323108564 29.722234705315596 33.49154458998137 19.687357473617382 29 17.85970511640033 27.911665594183027 34.0592438050126 20.16938548440405 30 20.258817552525404 29.288970438016342 31.599256368847684 18.85295564061057 31 23.971555120400232 28.075677505285128 28.72668941670595 19.226077957608688 32 24.668239217714817 28.187515398028477 28.880821092199486 18.263424292057216 33 23.733154596684003 27.58252626150689 29.115365136855605 19.568954004953504 34 19.08389818002873 28.120393539345805 30.999812912957992 21.79589536766747 35 18.87443718512725 28.22780126192919 31.717372991961636 21.180388560981932 36 24.498490395614194 27.014285227103592 29.472137257507942 19.01508711977427 37 20.24645132215082 30.98569373755608 29.304460097712344 19.463394842580755 38 19.801458259032366 30.22950512449575 28.954189809524994 21.01484680694689 39 19.696887120220477 29.403453684164564 29.17882174684478 21.72083744877018 40 21.931923901787908 27.45500747870092 29.150392165674337 21.462676453836828 41 18.07295884690639 26.819548970431644 29.969368082440685 25.138124100221287 42 20.33750884838842 26.63472482109602 29.192462846330148 23.835303484185406 43 20.72561087743823 26.632015724235615 29.777787126817923 22.864586271508237 44 20.741419254411923 28.635918736018272 28.984085490172827 21.638576519396974 45 18.72938895204803 31.942196159648034 27.026842687844795 22.301572200459145 46 21.112023704916247 30.37382030783627 27.718012976255245 20.79614301099224 47 20.10847861263644 28.48873509717849 29.790982022114516 21.611804268070554 48 20.11475734300704 27.903251458051866 31.350306303239726 20.631684895701362 49 21.123338168274437 26.388451980620715 30.746400805462304 21.741809045642547 50 19.27847507806183 29.481921877933193 29.995024823295175 21.244578220709805 51 18.65917553577171 30.486837454507093 28.48430492701852 22.36968208270267 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2603.0 1 3889.0 2 5175.0 3 21444.0 4 37713.0 5 26176.5 6 14640.0 7 14297.5 8 13955.0 9 15244.0 10 16533.0 11 17565.5 12 18598.0 13 18379.0 14 18160.0 15 17573.0 16 16986.0 17 16073.5 18 15161.0 19 15154.0 20 15147.0 21 17937.5 22 20728.0 23 20133.5 24 19539.0 25 23636.5 26 33217.5 27 38701.0 28 50327.5 29 61954.0 30 68200.0 31 74446.0 32 82654.5 33 90863.0 34 98892.0 35 106921.0 36 119633.5 37 132346.0 38 142305.0 39 152264.0 40 177092.0 41 201920.0 42 225526.5 43 249133.0 44 257473.5 45 265814.0 46 266765.0 47 267716.0 48 258590.0 49 249464.0 50 234902.0 51 220340.0 52 202793.5 53 185247.0 54 165948.5 55 146650.0 56 134709.0 57 122768.0 58 112592.5 59 102417.0 60 89587.5 61 76758.0 62 64675.5 63 52593.0 64 43957.5 65 35322.0 66 28348.5 67 21375.0 68 18713.0 69 16051.0 70 13139.0 71 10227.0 72 7873.5 73 5520.0 74 4630.0 75 2852.0 76 1964.0 77 1533.5 78 1103.0 79 829.5 80 556.0 81 432.5 82 309.0 83 246.5 84 184.0 85 142.5 86 101.0 87 84.0 88 67.0 89 57.5 90 48.0 91 31.5 92 15.0 93 11.5 94 8.0 95 4.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3137577.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.575604542774947 #Duplication Level Percentage of deduplicated Percentage of total 1 79.30530465102117 15.524492819926813 2 8.940488888076667 3.50030949784125 3 3.0981983833162516 1.8194731904059083 4 1.5425356435330213 1.2078427100374913 5 0.9199376423802492 0.9004167745624239 6 0.6523205477766578 0.766174144704131 7 0.47280275795781423 0.6478779871560858 8 0.36653502550550593 0.574011576829737 9 0.2930292988509242 0.5162603106377078 >10 2.3730991832909245 10.113542318348042 >50 0.6910256768803618 9.893922063368937 >100 1.3342486398103055 52.098082837309356 >500 0.008509850050146095 1.049584500585583 >1k 0.0018001605875309047 0.577827294114158 >5k 0.0 0.0 >10k+ 1.6365096250280952E-4 0.810181974172371 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25290 0.8060359952919084 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3670 0.11696924091424687 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.054628141397007945 0.0 2 0.0 0.0 0.0 0.18574842944093484 0.0 3 0.0 0.0 0.0 0.2733000656238875 0.0 4 0.0 0.0 0.0 0.461120157369843 0.0 5 0.0 0.0 0.0 0.8476923434867096 0.0 6 0.0 0.0 0.0 1.3268518987741178 0.0 7 0.0 0.0 0.0 1.584885406796391 0.0 8 0.0 0.0 0.0 2.0887774228329694 0.0 9 0.0 0.0 0.0 2.2937126323911734 0.0 10 0.0 0.0 0.0 2.637959164030078 0.0 11 0.0 0.0 0.0 3.092577488934933 0.0 12 0.0 0.0 0.0 3.414322580768536 0.0 13 0.0 0.0 0.0 3.559211455208908 0.0 14 0.0 0.0 0.0 3.630667868868238 0.0 15 0.0 0.0 0.0 3.7113989553085074 0.0 16 0.0 0.0 0.0 3.8769407093435477 0.0 17 0.0 0.0 0.0 4.088473366550048 0.0 18 0.0 0.0 0.0 4.329041167754608 0.0 19 0.0 0.0 0.0 4.480750591937664 0.0 20 0.0 0.0 0.0 4.650435670582746 0.0 21 0.0 0.0 0.0 4.869235081720704 0.0 22 0.0 0.0 0.0 5.110440317480655 0.0 23 0.0 0.0 0.0 5.354099676278861 0.0 24 0.0 0.0 0.0 5.53882821043117 0.0 25 0.0 0.0 0.0 5.703636914727511 0.0 26 0.0 0.0 0.0 5.850023760373052 0.0 27 0.0 0.0 0.0 6.024139009178102 0.0 28 0.0 0.0 0.0 6.20115458521018 0.0 29 0.0 0.0 0.0 6.406599742412697 0.0 30 0.0 0.0 0.0 6.638339075025091 0.0 31 0.0 0.0 0.0 6.842573106572365 0.0 32 0.0 0.0 0.0 7.017389533388344 0.0 33 0.0 0.0 0.0 7.199345227224702 0.0 34 0.0 0.0 0.0 7.3973642718569135 0.0 35 0.0 0.0 0.0 7.612849023306838 0.0 36 0.0 0.0 0.0 7.802198957985732 0.0 37 0.0 0.0 0.0 8.01102251833182 0.0 38 0.0 0.0 0.0 8.250666039431064 0.0 39 0.0 0.0 0.0 8.692981877416873 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGA 35 1.2128294E-7 45.0 39 TCGGGTA 35 1.2128294E-7 45.0 5 CTACGTT 20 7.0351554E-4 45.0 28 GCGATAT 155 0.0 45.0 9 CGTAACG 20 7.0351554E-4 45.0 12 ACCGTAA 20 7.0351554E-4 45.0 20 CGTAGGT 30 2.1667074E-6 44.999996 37 GACGATT 30 2.1667074E-6 44.999996 9 CGACGGT 670 0.0 43.320896 28 CGGTCTA 680 0.0 42.683823 31 CGTTTTT 11215 0.0 42.61257 1 CGACAGG 240 0.0 42.187496 2 TAACGCG 70 0.0 41.785713 1 CACGACG 695 0.0 41.76259 26 CGGGTAC 65 0.0 41.538464 6 CGTAAGG 550 0.0 41.318184 2 TCACGAC 725 0.0 40.34483 25 ACGACGG 720 0.0 40.3125 27 CTACCGT 45 1.9301297E-8 40.0 27 TTAGCGG 795 0.0 39.905663 2 >>END_MODULE