##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547521_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3951743 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5392048521374 31.0 31.0 33.0 30.0 34.0 2 31.971042651306018 31.0 31.0 34.0 30.0 34.0 3 32.05084693007617 33.0 31.0 34.0 30.0 34.0 4 35.77718718044164 37.0 35.0 37.0 35.0 37.0 5 35.71148579247183 37.0 35.0 37.0 33.0 37.0 6 35.763317857461885 37.0 35.0 37.0 33.0 37.0 7 36.086163497980515 37.0 35.0 37.0 35.0 37.0 8 36.07428468905999 37.0 35.0 37.0 35.0 37.0 9 37.89828690782776 39.0 38.0 39.0 35.0 39.0 10 37.37890267661637 39.0 37.0 39.0 35.0 39.0 11 37.067287017399664 39.0 37.0 39.0 33.0 39.0 12 36.654572172330035 39.0 35.0 39.0 33.0 39.0 13 36.48771744518811 39.0 35.0 39.0 32.0 39.0 14 37.60148066308968 40.0 36.0 41.0 33.0 41.0 15 37.71261719195808 40.0 36.0 41.0 33.0 41.0 16 37.76217785417726 40.0 36.0 41.0 33.0 41.0 17 37.68979865340433 40.0 35.0 41.0 33.0 41.0 18 37.563940266358415 39.0 36.0 41.0 32.0 41.0 19 37.55538783772123 39.0 36.0 41.0 32.0 41.0 20 37.4388564742191 39.0 35.0 41.0 32.0 41.0 21 37.32443329437162 39.0 35.0 41.0 32.0 41.0 22 37.26497826402172 39.0 35.0 41.0 32.0 41.0 23 37.1799790624036 39.0 35.0 41.0 32.0 41.0 24 37.08754111793201 39.0 35.0 41.0 32.0 41.0 25 36.98403210937553 39.0 35.0 41.0 31.0 41.0 26 36.9556375503164 39.0 35.0 41.0 31.0 41.0 27 36.92361446581926 39.0 35.0 41.0 31.0 41.0 28 36.89767401372002 39.0 35.0 41.0 31.0 41.0 29 36.858911371513784 39.0 35.0 41.0 31.0 41.0 30 36.80988490395251 39.0 35.0 41.0 31.0 41.0 31 36.77812676583472 39.0 35.0 41.0 31.0 41.0 32 36.67178356487251 39.0 35.0 41.0 31.0 41.0 33 36.59549419079125 39.0 35.0 41.0 30.0 41.0 34 36.4693316341675 39.0 35.0 41.0 30.0 41.0 35 36.31882361783142 39.0 35.0 41.0 30.0 41.0 36 36.22445234925449 39.0 35.0 41.0 30.0 41.0 37 36.20485821066805 39.0 35.0 41.0 30.0 41.0 38 36.08082408193043 39.0 35.0 41.0 29.0 41.0 39 35.99238538538564 38.0 35.0 41.0 29.0 41.0 40 35.843557387208634 38.0 35.0 41.0 28.0 41.0 41 35.78445739006813 38.0 35.0 41.0 28.0 41.0 42 35.76469547741338 38.0 35.0 41.0 28.0 41.0 43 35.67375358164739 38.0 35.0 40.0 28.0 41.0 44 35.53270873131173 38.0 34.0 40.0 27.0 41.0 45 35.42118579067515 38.0 34.0 40.0 27.0 41.0 46 35.35069234006361 38.0 34.0 40.0 27.0 41.0 47 35.29932386797421 38.0 34.0 40.0 27.0 41.0 48 35.18233625010534 38.0 34.0 40.0 26.0 41.0 49 35.065553352027194 38.0 34.0 40.0 26.0 41.0 50 34.963238500074524 37.0 34.0 40.0 26.0 41.0 51 34.58835658088089 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 23.0 12 32.0 13 35.0 14 53.0 15 144.0 16 400.0 17 785.0 18 1685.0 19 3172.0 20 5224.0 21 8045.0 22 11931.0 23 17249.0 24 24877.0 25 35141.0 26 47191.0 27 56517.0 28 63383.0 29 71779.0 30 84780.0 31 103536.0 32 129910.0 33 166952.0 34 277211.0 35 401317.0 36 272468.0 37 366607.0 38 595795.0 39 1205137.0 40 355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.44239668419733 23.443781642682733 29.408972192776705 12.704849480343231 2 31.197904317158276 25.02958820955715 29.583021972835784 14.18948550044879 3 29.69659211137971 25.609408304133137 31.01193574582153 13.682063838665623 4 26.593784059337867 27.38308133904457 30.613503965212313 15.409630636405252 5 24.445086636453837 31.702162817774333 28.72142748149361 15.131323064278218 6 23.066580999827167 40.55638233559217 25.932278490782423 10.444758173798245 7 87.9630330211251 3.7785351932046183 5.980095365513395 2.2783364201568777 8 87.90946172359892 3.695382012443623 6.023797600198192 2.3713586637592576 9 82.71365319050354 6.313416636658811 7.561726559647224 3.4112036131904326 10 40.30343066338069 35.622002746636106 13.488706122842503 10.585860467140702 11 32.03621794231052 22.824535907319884 27.442067968488843 17.697178181880755 12 30.69435436464365 22.3101046803904 28.616157477852177 18.37938347711377 13 25.026678101283405 27.675635789068266 28.646118940427044 18.651567169221277 14 18.61411534100269 30.78725008179935 30.257762207714418 20.34087236948354 15 18.667408280346166 28.300600519821256 35.774112840840104 17.257878358992475 16 22.508270401187527 26.707328892592457 32.75000423863597 18.034396467584052 17 22.879802659231636 25.922738396702417 27.33892360915171 23.858535334914237 18 23.589489498684504 27.282619340377146 30.557452749331116 18.57043841160723 19 26.37995436444121 27.163709785783137 27.421444157679282 19.034891692096373 20 27.333558887812288 26.91731218350991 27.8562396390656 17.892889289612203 21 26.60590529293023 25.878681887966902 29.82623110865256 17.6891817104503 22 24.54484008701983 23.546824780862522 30.16901655800997 21.739318574107678 23 21.482014392130257 26.50210299607034 30.216792944278005 21.799089667521397 24 21.049445776205587 26.209320798442608 33.50794826485427 19.23328516049753 25 20.910013631959366 28.314796787139247 30.338561996567087 20.436627584334303 26 20.29906803149901 31.307071335357588 27.658934298105926 20.734926335037475 27 19.266055510188796 30.708803684855013 30.669302128200137 19.355838676756054 28 18.22304739959051 28.867590832703442 33.32767338361832 19.58168838408773 29 19.578499917631284 26.470901574317967 33.25254197957711 20.69805652847364 30 20.643068134744595 27.145743030353948 31.6729099033009 20.538278931600562 31 24.14230884953804 26.61683717792377 29.109863672814758 20.13099029972344 32 24.900657760385734 27.038372687697553 28.727956246142526 19.333013305774184 33 23.874629498932496 27.20991724411228 28.38228599380071 20.53316726315451 34 20.85859328402682 27.219077758852233 30.08614173543168 21.836187221689265 35 21.054506834072964 27.485947340198997 29.754212255199796 21.705333570528246 36 23.739499253873543 27.381537716395023 28.880091645635865 19.998871384095576 37 21.346631094177937 29.67310880287509 28.954337364550277 20.025922738396705 38 21.169316931794402 30.071161004144248 27.63297107124628 21.12655099281507 39 21.173340472798966 29.323693367711414 28.41695424019224 21.086011919297384 40 23.151404329684393 27.186054356267604 27.943618803145853 21.71892251090215 41 20.423013338671062 26.91245356795723 29.195117192590715 23.469415900780994 42 21.64905460704302 26.786534448216905 27.560724470189484 24.003686474550598 43 21.620282493066984 26.92373972700148 28.16061165920962 23.29536612072192 44 20.746718599868462 28.47204385507863 28.724843695554085 22.056393849498814 45 20.918111324547166 29.80229230493987 26.84506558245311 22.43453078805985 46 21.45043339103783 29.225863119135028 28.052203799690417 21.271499690136732 47 20.89485576364657 27.760459118925496 29.250409249791804 22.094275867636128 48 21.94871984337038 26.781422779770853 30.38072060860233 20.88913676825644 49 21.8737402710652 26.588723001470488 29.894302336968774 21.643234390495536 50 20.39396286651232 28.79534423164664 29.528413158446792 21.282279743394245 51 19.916477362014685 28.87662482099671 29.110546915626852 22.096350901361753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2231.0 1 4480.0 2 6729.0 3 16900.0 4 27071.0 5 20235.5 6 13400.0 7 13082.5 8 12765.0 9 13075.0 10 13385.0 11 13354.5 12 13324.0 13 13031.0 14 12738.0 15 12328.0 16 11918.0 17 12078.5 18 12239.0 19 14161.0 20 16083.0 21 15872.0 22 15661.0 23 18926.5 24 22192.0 25 28903.5 26 44220.0 27 52825.0 28 62291.5 29 71758.0 30 81035.0 31 90312.0 32 99962.5 33 109613.0 34 128461.0 35 147309.0 36 154644.5 37 161980.0 38 176594.0 39 191208.0 40 216028.0 41 240848.0 42 272684.0 43 304520.0 44 305355.0 45 306190.0 46 309089.5 47 311989.0 48 314242.5 49 316496.0 50 299611.5 51 282727.0 52 256848.0 53 230969.0 54 218766.5 55 206564.0 56 190734.5 57 174905.0 58 166873.0 59 158841.0 60 144289.0 61 129737.0 62 109670.5 63 89604.0 64 77764.0 65 65924.0 66 51547.5 67 37171.0 68 30578.0 69 23985.0 70 18311.5 71 12638.0 72 10254.5 73 7871.0 74 6352.5 75 3936.0 76 3038.0 77 2120.5 78 1203.0 79 886.5 80 570.0 81 425.5 82 281.0 83 268.0 84 255.0 85 160.5 86 66.0 87 60.5 88 55.0 89 52.5 90 50.0 91 44.5 92 39.0 93 24.5 94 10.0 95 7.0 96 4.0 97 3.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3951743.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.192539803396027 #Duplication Level Percentage of deduplicated Percentage of total 1 81.71287143505116 13.231389231618481 2 8.38523782821456 2.7155659458861265 3 2.5540828580940764 1.2407126502257948 4 1.1541232428412578 0.7475274619092628 5 0.6273473635891809 0.5079173577736686 6 0.41861166807589895 0.4067031658491 7 0.2974356585819213 0.3371367118375951 8 0.21901916640718147 0.28371812558039233 9 0.17059625356971103 0.2486147963614009 >10 1.7548888848057664 6.790596158719518 >50 0.8500308188275738 10.148917794547083 >100 1.843627787918 61.33039759295742 >500 0.009764624798327886 1.0025197468258733 >1k 0.0022049152770417806 0.6605343024226539 >5k 0.0 0.0 >10k+ 1.5749394836012717E-4 0.34774895748563023 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13636 0.34506292539772954 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2652644668441243E-4 0.0 0.0 0.02312903445391059 0.0 2 1.2652644668441243E-4 0.0 0.0 0.08505107746126203 0.0 3 1.2652644668441243E-4 0.0 0.0 0.12156660997438345 0.0 4 1.2652644668441243E-4 0.0 0.0 0.19826694195447428 0.0 5 1.2652644668441243E-4 0.0 0.0 0.3597399932131214 0.0 6 1.2652644668441243E-4 0.0 0.0 0.5159748495790338 0.0 7 1.2652644668441243E-4 0.0 0.0 0.6063400378010412 0.0 8 1.2652644668441243E-4 0.0 0.0 0.8024560301618805 0.0 9 1.2652644668441243E-4 0.0 0.0 0.8659723063974555 0.0 10 1.2652644668441243E-4 0.0 0.0 1.0034053327860644 0.0 11 1.2652644668441243E-4 0.0 0.0 1.1904620315642995 0.0 12 1.2652644668441243E-4 0.0 0.0 1.3395354910478743 0.0 13 1.2652644668441243E-4 0.0 0.0 1.400318796035066 0.0 14 1.2652644668441243E-4 0.0 0.0 1.4248143161131683 0.0 15 1.2652644668441243E-4 0.0 0.0 1.467124759884436 0.0 16 1.2652644668441243E-4 0.0 0.0 1.5575658639744538 0.0 17 1.2652644668441243E-4 0.0 0.0 1.6701997068129177 0.0 18 1.2652644668441243E-4 0.0 0.0 1.8118587165207858 0.0 19 1.2652644668441243E-4 0.0 0.0 1.893873159261622 0.0 20 1.2652644668441243E-4 0.0 0.0 1.9869460134426757 0.0 21 1.2652644668441243E-4 0.0 0.0 2.1043119453871366 0.0 22 1.2652644668441243E-4 0.0 0.0 2.2363296398576527 0.0 23 1.2652644668441243E-4 0.0 0.0 2.368322029038832 0.0 24 1.2652644668441243E-4 0.0 0.0 2.467468152660737 0.0 25 1.2652644668441243E-4 0.0 0.0 2.558794941877546 0.0 26 1.2652644668441243E-4 0.0 0.0 2.6470344857952552 0.0 27 1.2652644668441243E-4 0.0 0.0 2.7360331883930713 0.0 28 1.2652644668441243E-4 0.0 0.0 2.839810179963626 0.0 29 1.2652644668441243E-4 0.0 0.0 2.9502171573404445 0.0 30 1.2652644668441243E-4 0.0 0.0 3.077376236258279 0.0 31 1.2652644668441243E-4 0.0 0.0 3.1928948820811476 0.0 32 1.2652644668441243E-4 0.0 0.0 3.304541818635473 0.0 33 1.2652644668441243E-4 0.0 0.0 3.416947913869905 0.0 34 1.518317360212949E-4 0.0 0.0 3.541399326828693 0.0 35 1.518317360212949E-4 0.0 0.0 3.675567970892844 0.0 36 1.771370253581774E-4 0.0 0.0 3.8014111747651604 0.0 37 1.771370253581774E-4 0.0 0.0 3.9305693715406087 0.0 38 1.771370253581774E-4 0.0 0.0 4.0730887610859305 0.0 39 1.771370253581774E-4 0.0 0.0 4.259411606473397 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTAACG 30 2.1668511E-6 45.000004 14 TAACGCG 35 1.2129385E-7 45.0 1 CGTAACG 50 2.1827873E-11 45.0 23 CAATCGA 35 1.2129385E-7 45.0 19 CGATATA 245 0.0 42.2449 10 CGCAATA 75 0.0 42.0 30 CACGACG 605 0.0 41.65289 26 GCGATAT 350 0.0 41.142857 9 CGTTTTT 8270 0.0 40.89178 1 GTCGTTA 50 1.0822987E-9 40.5 39 TCACGAC 640 0.0 40.07813 25 AGCGTAA 45 1.9303116E-8 40.0 36 CCGTCGA 45 1.9303116E-8 40.0 36 CGACTAT 45 1.9303116E-8 40.0 31 TAGTGCG 225 0.0 40.0 1 GGCGATA 785 0.0 39.840763 8 ATTAGCG 205 0.0 39.512196 1 CTCACGA 650 0.0 39.46154 24 CTATACG 115 0.0 39.130436 1 TAAGGGA 5425 0.0 38.737328 4 >>END_MODULE