SRR1547519_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547519_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2440771
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16228	0.6648718785990165	No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	6068	0.24860996791587578	No Hit
TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3297	0.13508026766951917	No Hit
GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3186	0.13053252435398485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGGT	30	2.1665091E-6	45.000004	31
CGCCGTA	30	2.1665091E-6	45.000004	30
TCGCCGG	25	3.892099E-5	45.0	20
ACGCCTA	20	7.0348463E-4	45.0	18
CTATACG	20	7.0348463E-4	45.0	1
GGTCCGC	25	3.892099E-5	45.0	43
ATAGCCG	25	3.892099E-5	45.0	15
CGCGCCA	20	7.0348463E-4	45.0	17
TGCGGTA	45	3.8562575E-10	45.0	24
CCGTCTA	50	2.1827873E-11	45.0	27
GTTCGCT	25	3.892099E-5	45.0	43
CGCTATA	25	3.892099E-5	45.0	25
CACTACG	20	7.0348463E-4	45.0	32
TCGCTGC	20	7.0348463E-4	45.0	16
TCGTCGC	35	1.2126839E-7	45.0	39
GTCGTCG	25	3.892099E-5	45.0	44
TCCGTCG	25	3.892099E-5	45.0	41
ACGTCGT	25	3.892099E-5	45.0	44
ATACGTC	40	6.8212103E-9	45.0	28
CGCGTAT	20	7.0348463E-4	45.0	31