SRR1547518_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547518_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2091806
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27309	1.3055225962637071	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2551	0.12195203570503192	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCGC	35	1.2125747E-7	45.000004	13
CGCGTCA	35	1.2125747E-7	45.000004	39
CCGCTTA	20	7.0346147E-4	45.0	40
CCCGTCG	20	7.0346147E-4	45.0	20
AGCGCGA	55	1.8189894E-12	45.0	36
GCGCTAA	25	3.891907E-5	45.0	34
CCCGACG	20	7.0346147E-4	45.0	10
CGTATTA	30	2.16636E-6	44.999996	38
TACGCAT	30	2.16636E-6	44.999996	45
CGACGGT	390	0.0	43.846153	28
CGTTTTT	10705	0.0	43.528725	1
TCACGAC	405	0.0	42.222225	25
CTCGTCC	310	0.0	42.09677	37
GTAAGCG	70	0.0	41.785717	1
AAGCGAC	65	0.0	41.53846	15
TATCGTG	130	0.0	41.53846	1
CGGGTCC	60	3.6379788E-12	41.249996	6
GCGCGAC	60	3.6379788E-12	41.249996	9
CTATCGA	55	6.184564E-11	40.909092	41
CGTAAGG	220	0.0	40.909092	2