##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547518_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2091806 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.662928588980048 31.0 31.0 33.0 30.0 34.0 2 32.0861662123543 33.0 31.0 34.0 30.0 34.0 3 32.00641072833714 33.0 31.0 34.0 30.0 34.0 4 35.79717813219773 37.0 35.0 37.0 35.0 37.0 5 35.77761322034644 37.0 35.0 37.0 35.0 37.0 6 35.849613205048655 37.0 35.0 37.0 35.0 37.0 7 36.21337686190785 37.0 35.0 37.0 35.0 37.0 8 36.24985443200756 37.0 35.0 37.0 35.0 37.0 9 38.122361251473606 39.0 39.0 39.0 37.0 39.0 10 37.58510253818949 39.0 37.0 39.0 35.0 39.0 11 37.19594360088842 39.0 37.0 39.0 34.0 39.0 12 36.88139913548388 39.0 35.0 39.0 33.0 39.0 13 36.719160381029596 39.0 35.0 39.0 33.0 39.0 14 37.820727161122974 40.0 36.0 41.0 33.0 41.0 15 37.97380349802993 40.0 36.0 41.0 33.0 41.0 16 38.05957866073623 40.0 36.0 41.0 33.0 41.0 17 37.99897457029954 40.0 36.0 41.0 33.0 41.0 18 37.84585807670501 39.0 36.0 41.0 33.0 41.0 19 37.801826268784005 39.0 36.0 41.0 33.0 41.0 20 37.64079603940327 39.0 35.0 41.0 33.0 41.0 21 37.53799635339033 39.0 35.0 41.0 33.0 41.0 22 37.486747815045945 39.0 35.0 41.0 33.0 41.0 23 37.420425221076904 39.0 35.0 41.0 33.0 41.0 24 37.33151831479592 39.0 35.0 41.0 33.0 41.0 25 37.24762717001481 39.0 35.0 41.0 33.0 41.0 26 37.220998027541754 39.0 35.0 41.0 33.0 41.0 27 37.18415522280747 39.0 35.0 41.0 32.0 41.0 28 37.168136528913294 39.0 35.0 41.0 33.0 41.0 29 37.12654137142737 39.0 35.0 41.0 32.0 41.0 30 37.05002471548509 39.0 35.0 41.0 32.0 41.0 31 36.950421788636234 39.0 35.0 41.0 32.0 41.0 32 36.782554883196624 39.0 35.0 41.0 31.0 41.0 33 36.62723742067859 39.0 35.0 41.0 31.0 41.0 34 36.44751951184766 39.0 35.0 41.0 30.0 41.0 35 36.23005861920274 39.0 35.0 41.0 30.0 41.0 36 36.08674465987764 39.0 35.0 41.0 30.0 41.0 37 36.03448837989756 39.0 35.0 41.0 29.0 41.0 38 35.880456409437585 39.0 35.0 41.0 29.0 41.0 39 35.792083969545935 39.0 35.0 41.0 28.0 41.0 40 35.65527826194207 39.0 35.0 41.0 27.0 41.0 41 35.59520433539248 38.0 35.0 41.0 27.0 41.0 42 35.57168829231774 38.0 35.0 41.0 27.0 41.0 43 35.49931972659032 38.0 35.0 41.0 26.0 41.0 44 35.36473363208634 38.0 35.0 41.0 26.0 41.0 45 35.27343357844848 38.0 34.0 40.0 26.0 41.0 46 35.239595354444916 38.0 34.0 40.0 26.0 41.0 47 35.16562577982853 38.0 34.0 40.0 25.0 41.0 48 35.035076388536986 38.0 34.0 40.0 24.0 41.0 49 34.97235068644033 38.0 34.0 40.0 24.0 41.0 50 34.88072698902288 38.0 34.0 40.0 24.0 41.0 51 34.542102852750205 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 1.0 12 1.0 13 10.0 14 15.0 15 31.0 16 80.0 17 250.0 18 528.0 19 1099.0 20 2087.0 21 3375.0 22 5543.0 23 8477.0 24 13146.0 25 21145.0 26 29860.0 27 34129.0 28 35015.0 29 36498.0 30 41450.0 31 49947.0 32 62297.0 33 81919.0 34 135595.0 35 219761.0 36 141756.0 37 187755.0 38 299026.0 39 680775.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.008375537693265 24.04768893482474 31.033566210250857 14.91036931723114 2 31.196248600491632 25.50585474943661 30.643138034789075 12.65475861528268 3 27.00604166925614 24.80669813548675 35.40103623376164 12.786223961495475 4 24.721317368819097 27.489786337738774 34.15703941952552 13.631856873916606 5 22.924401211202188 31.345880067272013 32.394208640763054 13.335510080762747 6 21.34973319705556 40.00217993446811 28.559484005686954 10.08860286278938 7 88.499220290983 2.824210275713905 7.524885194898571 1.1516842384045176 8 90.12747836080402 1.818189640913163 7.123461735935359 0.9308702623474644 9 85.50625631631232 5.132885171951893 7.90876400583993 1.4520945058958623 10 40.548406496587155 40.19411933993879 12.435522223380179 6.821951940093871 11 26.771172852549423 24.47067271056685 32.69184618458882 16.066308252294906 12 28.647446273698424 22.482629842346757 32.079026448915435 16.790897435039387 13 23.150378189946867 27.856407334140933 31.664265233009182 17.328949242903022 14 15.538821477708737 32.96730193908996 32.81695338860296 18.676923194598352 15 14.979257158646645 30.24988933008128 39.607353645605755 15.163499865666319 16 20.918048805673184 27.431750363083385 36.912648687306564 14.737552143936867 17 20.134324119923168 26.700229371174956 30.975243402112817 22.19020310678906 18 20.523843989356568 28.936239785142597 33.90567767756666 16.634238547934178 19 23.301204796238277 28.807069106790973 30.619139633407688 17.272586463563062 20 25.12360132823025 29.035053919914176 30.26346611492653 15.577878636929047 21 23.102190164862325 27.534341138709806 33.80566840328405 15.55780029314382 22 22.006438455573797 23.68168941096832 34.06491806601568 20.2469540674422 23 18.183521798866625 28.23765683815803 33.97279671250584 19.606024650469497 24 17.886696949908355 28.875239864499864 36.51504967477864 16.723013510813146 25 18.708618294430746 30.36428808407663 32.75757885769522 18.169514763797405 26 18.186724772756175 33.442298186351884 29.959327012160784 18.411650028731156 27 16.886938846145387 32.68663537632075 33.99464386276739 16.431781914766475 28 15.392440790398346 30.614215658622264 36.6556936924361 17.337649858543287 29 16.667128787277598 28.633869488853176 36.02982303330232 18.669178690566905 30 18.6987703448599 30.116846399713932 34.100915668087765 17.083467587338404 31 22.564951051866185 29.590793792540993 30.54069067590398 17.303564479688845 32 22.786051861405884 29.682389284665977 31.014874228298417 16.51668462562972 33 22.406714580606423 29.661402634852372 30.36137194366973 17.570510840871474 34 18.84997939579483 30.03591155202729 31.42829688795232 19.685812164225556 35 18.643220260387437 29.590172319995254 31.975049311456228 19.79155810816108 36 22.55146987818182 29.545139463219822 30.97361801237782 16.92977264622054 37 19.330425479227042 30.967355481340046 31.679993268974272 18.022225770458636 38 19.091875632826373 31.85854711192147 29.446325328448243 19.603251926803917 39 18.62610586258955 30.929780295113407 30.760596345932655 19.683517496364384 40 21.27969802170947 29.318971262153376 29.841677478695445 19.55965323744171 41 18.464618611859798 28.833983648579263 31.163788611372183 21.537609128188752 42 19.64187883580026 28.927730391824095 30.363140750146044 21.067250022229594 43 19.666164070664298 29.613023387446063 29.52855092680679 21.192261615082852 44 19.244423240013653 30.847554696754862 30.30959850005211 19.598423563179377 45 18.687488227875818 33.34563530270015 28.104470491049362 19.862405978374667 46 20.736961266962613 32.35094459046393 28.60886717028252 18.30322697229093 47 19.561708877400676 30.102409114420748 30.64763175935053 19.688250248828044 48 19.71425648458796 30.338568681799366 31.469505298292482 18.477669535320196 49 20.12079514065836 29.164798265231095 30.75113084100533 19.96327575310521 50 18.491724375969856 30.90348722587085 31.189986069453862 19.414802328705434 51 17.290322333906683 32.47638643354116 29.746353151296056 20.4869380812561 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1235.0 1 2351.0 2 3467.0 3 21438.0 4 39409.0 5 26774.0 6 14139.0 7 13385.5 8 12632.0 9 13489.5 10 14347.0 11 15282.0 12 16217.0 13 16165.5 14 16114.0 15 15954.5 16 15795.0 17 15138.5 18 14482.0 19 14177.5 20 13873.0 21 14321.0 22 14769.0 23 16800.5 24 18832.0 25 21955.5 26 31070.5 27 37062.0 28 42910.0 29 48758.0 30 57279.5 31 65801.0 32 72028.0 33 78255.0 34 90101.0 35 101947.0 36 104989.0 37 108031.0 38 111659.5 39 115288.0 40 128931.5 41 142575.0 42 156512.0 43 170449.0 44 172970.5 45 175492.0 46 168854.0 47 162216.0 48 155358.0 49 148500.0 50 138939.5 51 129379.0 52 113372.0 53 97365.0 54 90034.0 55 82703.0 56 74322.0 57 65941.0 58 58660.5 59 51380.0 60 44741.5 61 38103.0 62 30663.0 63 23223.0 64 18253.0 65 13283.0 66 10526.0 67 7769.0 68 5775.5 69 3782.0 70 2859.0 71 1936.0 72 1387.0 73 838.0 74 752.5 75 519.0 76 371.0 77 252.5 78 134.0 79 105.5 80 77.0 81 64.0 82 51.0 83 35.5 84 20.0 85 14.5 86 9.0 87 8.5 88 8.0 89 4.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2091806.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.12532219655516 #Duplication Level Percentage of deduplicated Percentage of total 1 79.12204615704871 15.923566717613143 2 7.681955206454044 3.0920364725878406 3 2.8615617095202013 1.7276955416825772 4 1.5052633548357124 1.2117564002694499 5 1.0241595105260766 1.030577006500176 6 0.7003421617441278 0.8456766991759512 7 0.5162707544490467 0.7273080691761976 8 0.38656823451706523 0.6223848216487547 9 0.3046196664886454 0.551751204194205 >10 3.4509390315561337 16.50254092703994 >50 1.294151721854791 18.886077507344783 >100 1.1463952872618302 36.55783187444971 >500 0.004295402807750868 0.5665118483798957 >1k 0.0011931674465974634 0.4427494684820497 >5k 0.0 0.0 >10k+ 2.3863348931949267E-4 1.3115354414552873 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27309 1.3055225962637071 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2551 0.12195203570503192 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024572068346682244 0.0 2 0.0 0.0 0.0 0.08136509791060931 0.0 3 0.0 0.0 0.0 0.11894028413724791 0.0 4 0.0 0.0 0.0 0.17511184115544176 0.0 5 0.0 0.0 0.0 0.32211400101156606 0.0 6 0.0 0.0 0.0 0.47112399524621307 0.0 7 0.0 0.0 0.0 0.5671654063522144 0.0 8 0.0 0.0 0.0 0.7618297299080317 0.0 9 0.0 0.0 0.0 0.8481188026040656 0.0 10 4.780558044101604E-5 0.0 0.0 1.007693830116177 0.0 11 4.780558044101604E-5 0.0 0.0 1.2760265531316002 0.0 12 4.780558044101604E-5 0.0 0.0 1.4558233411702615 0.0 13 4.780558044101604E-5 0.0 0.0 1.5290614904058981 0.0 14 4.780558044101604E-5 0.0 0.0 1.5655849538628344 0.0 15 4.780558044101604E-5 0.0 0.0 1.618171092347952 0.0 16 4.780558044101604E-5 0.0 0.0 1.7151208094823325 0.0 17 4.780558044101604E-5 0.0 0.0 1.8586809675467038 0.0 18 4.780558044101604E-5 0.0 0.0 2.0072607115573815 0.0 19 4.780558044101604E-5 0.0 0.0 2.11209834946453 0.0 20 4.780558044101604E-5 0.0 0.0 2.219947738939462 0.0 21 4.780558044101604E-5 0.0 0.0 2.3469671661712415 0.0 22 4.780558044101604E-5 0.0 0.0 2.500853329610872 0.0 23 4.780558044101604E-5 0.0 0.0 2.6572731888138765 0.0 24 4.780558044101604E-5 0.0 0.0 2.774874916698776 0.0 25 4.780558044101604E-5 0.0 0.0 2.8751232188835867 0.0 26 4.780558044101604E-5 0.0 0.0 2.9824467469736677 0.0 27 4.780558044101604E-5 0.0 0.0 3.1085578681770683 0.0 28 4.780558044101604E-5 0.0 0.0 3.222478566368009 0.0 29 4.780558044101604E-5 0.0 0.0 3.3604932771012224 0.0 30 4.780558044101604E-5 0.0 0.0 3.5095988824967517 0.0 31 4.780558044101604E-5 0.0 0.0 3.640920811968223 0.0 32 4.780558044101604E-5 0.0 0.0 3.7659802104019207 0.0 33 4.780558044101604E-5 0.0 0.0 3.895915778040602 0.0 34 4.780558044101604E-5 0.0 0.0 4.034886600382636 0.0 35 4.780558044101604E-5 0.0 0.0 4.189203014046235 0.0 36 4.780558044101604E-5 0.0 0.0 4.336300785063242 0.0 37 4.780558044101604E-5 0.0 0.0 4.493867978196831 0.0 38 4.780558044101604E-5 0.0 0.0 4.665059761756109 0.0 39 4.780558044101604E-5 0.0 0.0 4.933918346156384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGC 35 1.2125747E-7 45.000004 13 CGCGTCA 35 1.2125747E-7 45.000004 39 CCGCTTA 20 7.0346147E-4 45.0 40 CCCGTCG 20 7.0346147E-4 45.0 20 AGCGCGA 55 1.8189894E-12 45.0 36 GCGCTAA 25 3.891907E-5 45.0 34 CCCGACG 20 7.0346147E-4 45.0 10 CGTATTA 30 2.16636E-6 44.999996 38 TACGCAT 30 2.16636E-6 44.999996 45 CGACGGT 390 0.0 43.846153 28 CGTTTTT 10705 0.0 43.528725 1 TCACGAC 405 0.0 42.222225 25 CTCGTCC 310 0.0 42.09677 37 GTAAGCG 70 0.0 41.785717 1 AAGCGAC 65 0.0 41.53846 15 TATCGTG 130 0.0 41.53846 1 CGGGTCC 60 3.6379788E-12 41.249996 6 GCGCGAC 60 3.6379788E-12 41.249996 9 CTATCGA 55 6.184564E-11 40.909092 41 CGTAAGG 220 0.0 40.909092 2 >>END_MODULE