##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547517_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3201459 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6092013047801 31.0 31.0 33.0 30.0 34.0 2 32.04231039660355 33.0 31.0 34.0 30.0 34.0 3 32.11013353599093 33.0 31.0 34.0 30.0 34.0 4 35.83520294965514 37.0 35.0 37.0 35.0 37.0 5 35.77485015425779 37.0 35.0 37.0 35.0 37.0 6 35.83249199817958 37.0 35.0 37.0 35.0 37.0 7 36.15082966859797 37.0 35.0 37.0 35.0 37.0 8 36.15880103415349 37.0 35.0 37.0 35.0 37.0 9 38.01738020071474 39.0 39.0 39.0 35.0 39.0 10 37.46061561306892 39.0 37.0 39.0 35.0 39.0 11 37.15294995188131 39.0 37.0 39.0 33.0 39.0 12 36.50617952627224 39.0 35.0 39.0 33.0 39.0 13 36.2118062420915 39.0 35.0 39.0 32.0 39.0 14 37.19825210942886 39.0 35.0 41.0 32.0 41.0 15 37.41901458053969 39.0 35.0 41.0 32.0 41.0 16 37.55986348724129 40.0 35.0 41.0 33.0 41.0 17 37.49352935645904 39.0 35.0 41.0 33.0 41.0 18 37.396667894231975 39.0 35.0 41.0 33.0 41.0 19 37.398388047449615 39.0 35.0 41.0 33.0 41.0 20 37.272189960889705 39.0 35.0 41.0 32.0 41.0 21 37.14246723134671 39.0 35.0 41.0 32.0 41.0 22 37.07732130881576 39.0 35.0 41.0 32.0 41.0 23 37.04647162434377 39.0 35.0 41.0 32.0 41.0 24 36.924927353434796 38.0 35.0 41.0 32.0 41.0 25 36.83812817843364 38.0 35.0 41.0 32.0 41.0 26 36.78716860031629 38.0 35.0 41.0 32.0 41.0 27 36.74871706931121 38.0 35.0 41.0 31.0 41.0 28 36.76598263479245 38.0 35.0 41.0 31.0 41.0 29 36.71237395200126 38.0 35.0 41.0 31.0 41.0 30 36.69066853581445 38.0 35.0 41.0 31.0 41.0 31 36.61233643785537 38.0 35.0 41.0 31.0 41.0 32 36.478330348756614 38.0 35.0 41.0 31.0 41.0 33 36.38896203262325 38.0 35.0 41.0 30.0 41.0 34 36.28412670597999 38.0 35.0 41.0 30.0 41.0 35 36.135275822679596 38.0 35.0 41.0 30.0 41.0 36 36.00600070155514 38.0 35.0 41.0 30.0 41.0 37 35.9496042273226 38.0 35.0 41.0 30.0 41.0 38 35.81128385526724 38.0 35.0 41.0 29.0 41.0 39 35.75842545539393 38.0 35.0 41.0 29.0 41.0 40 35.5805253167384 38.0 35.0 40.0 28.0 41.0 41 35.55192523158972 38.0 35.0 40.0 28.0 41.0 42 35.520696969725364 38.0 35.0 40.0 28.0 41.0 43 35.429526975044816 38.0 34.0 40.0 28.0 41.0 44 35.3173584293911 38.0 34.0 40.0 27.0 41.0 45 35.209840575812464 37.0 34.0 40.0 27.0 41.0 46 35.18627631964051 37.0 34.0 40.0 27.0 41.0 47 35.09860691640905 37.0 34.0 40.0 27.0 41.0 48 34.97608902690929 37.0 34.0 40.0 26.0 41.0 49 34.901616731621424 37.0 34.0 40.0 26.0 41.0 50 34.78811223257896 37.0 34.0 40.0 26.0 41.0 51 34.43952585368109 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 7.0 12 5.0 13 29.0 14 47.0 15 91.0 16 210.0 17 541.0 18 1073.0 19 2150.0 20 3751.0 21 6013.0 22 9291.0 23 13928.0 24 20079.0 25 29111.0 26 39747.0 27 47903.0 28 52225.0 29 58742.0 30 69668.0 31 84251.0 32 106335.0 33 140971.0 34 254423.0 35 413867.0 36 202215.0 37 270274.0 38 445497.0 39 928727.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.651456726448785 24.08782995502988 30.38402178506737 12.876691533453965 2 29.40237560437288 25.398232493372554 31.21195679844721 13.987435103807359 3 29.08477041249006 25.19929194782754 32.12931978825904 13.586617851423366 4 25.500748252593585 27.892251626524033 31.554269475261123 15.052730645621262 5 22.98111579751607 32.315203786773466 30.566907150770945 14.136773264939517 6 22.36177317904118 41.12031420674136 25.857179492225264 10.660733121992191 7 90.01489633320307 3.1242317955657093 5.213216848942935 1.6476550222882753 8 90.9579038806994 2.4043100348934656 5.1782015637245395 1.4595845206826012 9 86.05944976962067 5.059536917386729 6.679891886792866 2.2011214261997423 10 45.085287676649926 31.32634214587786 13.920715523765884 9.667654653706325 11 37.653832205878636 22.12185131841451 24.054001628632445 16.170314847074412 12 36.105069594831605 20.457610108391204 27.071250951519293 16.3660693452579 13 25.934144401037152 30.734362051802005 26.110626436259217 17.220867110901622 14 17.74153596844439 35.32002127779865 28.82779382775166 18.1106489260053 15 16.85981297901988 27.857361284339422 39.645392928661586 15.637432807979113 16 22.365896299156105 24.228297160763265 37.01512341716698 16.390683122913646 17 22.059473508797083 24.73997011987347 27.028208076380178 26.17234829494927 18 23.40517245418417 26.858129371639617 31.333807492146548 18.402890682029664 19 26.703918432189823 27.25082532682755 26.368196500408096 19.67705974057453 20 28.622106358382226 27.43096194578784 26.043781913183956 17.903149782645976 21 24.918669893945232 26.522313732582553 30.195357804051216 18.363658569421005 22 24.457692570793505 22.62565286639623 30.282505570116626 22.634148992693646 23 21.12458725849683 27.48115780961118 29.13946422552967 22.254790706362318 24 20.850555949646708 26.92244379828072 34.43704885803629 17.789951394036283 25 21.229164577775318 27.038328462116805 30.74582557515183 20.986681384956047 26 18.824073648920695 33.319464656583136 26.316126491077974 21.54033520341819 27 18.08194326399307 32.94560386373838 30.37493217935947 18.59752069290908 28 17.125660519157044 28.945365222543845 35.356941944282276 18.57203231401683 29 18.37009313566096 27.128912161611314 34.41668314352925 20.08431155919848 30 19.586319862287787 28.774162030499216 32.31951432143907 19.320003785773924 31 26.84772786407697 26.409021636697517 27.558778669350442 19.184471829875065 32 27.326509569543134 26.974420100335507 27.863483492994913 17.835586837126446 33 25.446429268655322 27.414438229569704 27.06322336159857 20.0759091401764 34 20.748477491043925 28.262988843524155 28.973945941522288 22.014587723909628 35 20.111549140563724 28.74954825284347 29.22723670676401 21.911665899828797 36 27.327977650190117 25.667078666320574 28.67333300223429 18.331610681255015 37 21.338708382646786 30.775811903260358 29.08926836170633 18.79621135238652 38 20.925303119608905 31.35367343451845 25.898441929132936 21.82258151673971 39 20.501746235075945 30.22022146777454 28.08282098880542 21.195211308344103 40 23.381558220798702 27.57202263093171 26.565262900446328 22.481156247823257 41 19.93116263553586 25.78302580167355 28.98025556472846 25.305555998062136 42 21.883647424502392 26.18706033717752 27.238174844656765 24.691117393663326 43 21.759703934987144 26.771856206810707 27.69096839909554 23.777471459106614 44 20.946668378386228 28.972571568150645 28.59539978491057 21.485360268552554 45 18.791369809827334 33.334551527912744 25.642027588046574 22.232051074213352 46 22.28034155677146 30.671734356117007 26.874715559374646 20.173208527736886 47 21.235942737358187 28.92856038449969 27.463634549122762 22.37186232901936 48 22.545345731430576 26.752271386264827 29.640641969801894 21.061740912502707 49 22.208936612963026 24.8999284388774 30.820697688147806 22.07043726001176 50 20.841497579697258 29.79866367178215 28.729588603196234 20.630250145324368 51 19.480805470255905 31.915604728968887 26.26730500062628 22.33628480014893 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1830.0 1 3300.0 2 4770.0 3 14773.0 4 24776.0 5 18361.5 6 11947.0 7 11376.5 8 10806.0 9 10924.5 10 11043.0 11 11163.0 12 11283.0 13 10552.0 14 9821.0 15 9237.0 16 8653.0 17 8463.0 18 8273.0 19 9962.5 20 11652.0 21 12931.5 22 14211.0 23 17178.0 24 20145.0 25 21330.0 26 32419.0 27 42323.0 28 43988.5 29 45654.0 30 56835.0 31 68016.0 32 77873.5 33 87731.0 34 96349.5 35 104968.0 36 112462.5 37 119957.0 38 138007.5 39 156058.0 40 182076.5 41 208095.0 42 238811.0 43 269527.0 44 275889.5 45 282252.0 46 269132.0 47 256012.0 48 254823.0 49 253634.0 50 236657.5 51 219681.0 52 205938.5 53 192196.0 54 178998.5 55 165801.0 56 161214.0 57 156627.0 58 142100.5 59 127574.0 60 108358.5 61 89143.0 62 77966.0 63 66789.0 64 56541.5 65 46294.0 66 37282.0 67 28270.0 68 22289.0 69 16308.0 70 13579.0 71 10850.0 72 9214.0 73 7578.0 74 6132.5 75 3402.0 76 2117.0 77 1453.0 78 789.0 79 551.0 80 313.0 81 298.0 82 283.0 83 183.0 84 83.0 85 65.5 86 48.0 87 46.0 88 44.0 89 31.0 90 18.0 91 13.0 92 8.0 93 6.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3201459.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.924063913547053 #Duplication Level Percentage of deduplicated Percentage of total 1 81.45893092884894 12.156982915113565 2 8.773588736341884 2.618751981046856 3 2.7087951378212676 1.2127869529665027 4 1.184735161975738 0.7072425311180973 5 0.6425382313747185 0.47946408159668924 6 0.441394053239733 0.395243583696562 7 0.3010746671435899 0.31452803026405884 8 0.22035952721499594 0.26309277344924886 9 0.18547624560933054 0.24912534095265598 >10 1.611666037943423 5.340055254663399 >50 0.5855564702943261 6.465537606892625 >100 1.8432053581059358 65.10945105658983 >500 0.03868481631457648 3.4260733738539058 >1k 0.00378438420468683 0.8287576450770048 >5k 0.0 0.0 >10k+ 2.1024356692704612E-4 0.4329068727190184 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13797 0.43095975928475105 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4901 0.1530864521457248 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019085048410740227 0.0 2 0.0 0.0 0.0 0.06534520666983397 0.0 3 0.0 0.0 0.0 0.09754927362805521 0.0 4 0.0 0.0 0.0 0.18001167592650727 0.0 5 0.0 0.0 0.0 0.32803793520391794 0.0 6 0.0 0.0 0.0 0.47384645563163547 0.0 7 0.0 0.0 0.0 0.5592762549824939 0.0 8 0.0 0.0 0.0 0.7478152929648638 0.0 9 0.0 0.0 0.0 0.8011659683912866 0.0 10 0.0 0.0 0.0 0.9157074946141743 0.0 11 0.0 0.0 0.0 1.081819258032041 0.0 12 0.0 0.0 0.0 1.216507848452846 0.0 13 3.123575844638335E-5 0.0 0.0 1.26604776134881 0.0 14 3.123575844638335E-5 0.0 0.0 1.2873817843676898 0.0 15 6.24715168927667E-5 0.0 0.0 1.3200231519441605 0.0 16 6.24715168927667E-5 0.0 0.0 1.3954262728337299 0.0 17 6.24715168927667E-5 0.0 0.0 1.4918822949161616 0.0 18 9.370727533915006E-5 0.0 0.0 1.6113278352151317 0.0 19 9.370727533915006E-5 0.0 0.0 1.6794530243866936 0.0 20 9.370727533915006E-5 0.0 0.0 1.7581671356715798 0.0 21 9.370727533915006E-5 0.0 0.0 1.8599332366898966 0.0 22 9.370727533915006E-5 0.0 0.0 1.9674467172623482 0.0 23 1.249430337855334E-4 0.0 0.0 2.0681820382519347 0.0 24 1.249430337855334E-4 0.0 0.0 2.1450220040300376 0.0 25 1.249430337855334E-4 0.0 0.0 2.2155523466019713 0.0 26 1.249430337855334E-4 0.0 0.0 2.2886752571249547 0.0 27 1.249430337855334E-4 0.0 0.0 2.379727492996162 0.0 28 1.249430337855334E-4 0.0 0.0 2.464282691110522 0.0 29 1.5617879223191677E-4 0.0 0.0 2.576731421517502 0.0 30 1.874145506783001E-4 0.0 0.0 2.6927410283873696 0.0 31 1.874145506783001E-4 0.0 0.0 2.7931952275509384 0.0 32 1.874145506783001E-4 0.0 0.0 2.887183624716106 0.0 33 1.874145506783001E-4 0.0 0.0 2.983577175281645 0.0 34 1.874145506783001E-4 0.0 0.0 3.095151304452126 0.0 35 1.874145506783001E-4 0.0 0.0 3.2217810691937645 0.0 36 1.874145506783001E-4 0.0 0.0 3.327982647911468 0.0 37 1.874145506783001E-4 0.0 0.0 3.4400877849755376 0.0 38 1.874145506783001E-4 0.0 0.0 3.5908003194793374 0.0 39 1.874145506783001E-4 0.0 0.0 3.9119976235834972 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 25 3.8923718E-5 45.0 36 GTAATCG 20 7.0351776E-4 45.0 1 TACGTCG 20 7.0351776E-4 45.0 34 TTTCGCG 65 0.0 44.999996 1 TACGATA 30 2.166722E-6 44.999996 24 AGCGATC 30 2.166722E-6 44.999996 45 CCCGGTA 60 0.0 44.999996 36 CTAGACG 105 0.0 42.857143 1 ACGGTCT 865 0.0 42.65896 30 CGATACA 90 0.0 42.500004 10 CGTTTTT 7460 0.0 42.406166 1 TCGTCGA 80 0.0 42.1875 32 TTCGTAA 70 0.0 41.785713 28 TCGCATA 65 0.0 41.53846 37 CCGGTTA 65 0.0 41.53846 45 TCACGAC 905 0.0 41.51934 25 CGACGGT 905 0.0 41.51934 28 CTCACGA 915 0.0 41.311478 24 CTACGGG 425 0.0 41.294117 3 CGTTCTA 60 3.6379788E-12 41.249996 21 >>END_MODULE