##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547516_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5109613 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56794242538525 31.0 31.0 33.0 30.0 34.0 2 32.0005540537023 31.0 31.0 34.0 30.0 34.0 3 32.07837658155324 33.0 31.0 34.0 30.0 34.0 4 35.79878593545147 37.0 35.0 37.0 35.0 37.0 5 35.73857804886593 37.0 35.0 37.0 33.0 37.0 6 35.788846435140975 37.0 35.0 37.0 35.0 37.0 7 36.10128653579048 37.0 35.0 37.0 35.0 37.0 8 36.09226041189421 37.0 35.0 37.0 35.0 37.0 9 37.903662371298964 39.0 38.0 39.0 35.0 39.0 10 37.41743885495829 39.0 37.0 39.0 35.0 39.0 11 37.10254455670126 39.0 37.0 39.0 33.0 39.0 12 36.62294032835755 39.0 35.0 39.0 33.0 39.0 13 36.419764667108836 39.0 35.0 39.0 32.0 39.0 14 37.53027695052443 40.0 35.0 41.0 33.0 41.0 15 37.65537076878425 40.0 35.0 41.0 33.0 41.0 16 37.70796966423876 40.0 35.0 41.0 33.0 41.0 17 37.644822024681716 40.0 35.0 41.0 33.0 41.0 18 37.51028933110981 39.0 36.0 41.0 32.0 41.0 19 37.49575554939288 39.0 36.0 41.0 32.0 41.0 20 37.37943675969198 39.0 35.0 41.0 32.0 41.0 21 37.25616049591231 39.0 35.0 41.0 32.0 41.0 22 37.19730300513953 39.0 35.0 41.0 32.0 41.0 23 37.123242601739115 39.0 35.0 41.0 32.0 41.0 24 37.01452399624003 39.0 35.0 41.0 32.0 41.0 25 36.917966585727726 39.0 35.0 41.0 31.0 41.0 26 36.891466927143014 39.0 35.0 41.0 31.0 41.0 27 36.85925822562296 39.0 35.0 41.0 31.0 41.0 28 36.838998374240866 39.0 35.0 41.0 31.0 41.0 29 36.785600201032835 39.0 35.0 41.0 31.0 41.0 30 36.744191585546695 39.0 35.0 41.0 31.0 41.0 31 36.67705205854142 39.0 35.0 41.0 31.0 41.0 32 36.565635792769434 39.0 35.0 41.0 30.0 41.0 33 36.469411088471865 39.0 35.0 41.0 30.0 41.0 34 36.356485119323125 39.0 35.0 41.0 30.0 41.0 35 36.19458342539836 39.0 35.0 41.0 30.0 41.0 36 36.09819569505557 39.0 35.0 41.0 30.0 41.0 37 36.06490902539977 39.0 35.0 41.0 30.0 41.0 38 35.933484590711664 38.0 35.0 41.0 29.0 41.0 39 35.853563273774355 38.0 35.0 41.0 29.0 41.0 40 35.69569593626758 38.0 35.0 41.0 28.0 41.0 41 35.63583817404567 38.0 35.0 40.0 28.0 41.0 42 35.604893169012996 38.0 35.0 40.0 28.0 41.0 43 35.48943608840826 38.0 35.0 40.0 27.0 41.0 44 35.36542493531311 38.0 34.0 40.0 27.0 41.0 45 35.26691121225815 38.0 34.0 40.0 27.0 41.0 46 35.207668760823964 38.0 34.0 40.0 26.0 41.0 47 35.13560635609781 38.0 34.0 40.0 26.0 41.0 48 35.01662063252149 37.0 34.0 40.0 26.0 41.0 49 34.904155950754 37.0 34.0 40.0 26.0 41.0 50 34.81226484275815 37.0 34.0 40.0 26.0 41.0 51 34.451770809256985 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 14.0 11 43.0 12 49.0 13 65.0 14 82.0 15 195.0 16 455.0 17 946.0 18 2211.0 19 4235.0 20 7118.0 21 10898.0 22 16705.0 23 23707.0 24 33560.0 25 46983.0 26 63344.0 27 75556.0 28 84083.0 29 93934.0 30 110058.0 31 134765.0 32 167453.0 33 217740.0 34 369017.0 35 554577.0 36 349750.0 37 471625.0 38 752209.0 39 1517802.0 40 429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.43607431717432 23.334330799612417 30.194987369884963 13.034607513328309 2 30.528535135635515 25.326634326317865 30.409074033591192 13.735756504455427 3 30.434105283511688 25.11426990654674 30.296854184455846 14.154770625485726 4 26.39327087981027 28.022122223346464 30.157137145220197 15.427469751623068 5 24.584816893177624 31.63752323316854 28.96313282434501 14.814527049308824 6 23.108403708852315 40.17973572558235 25.973493491581458 10.738367073983882 7 87.89558035021439 3.8832490836390154 6.153636293003012 2.0675342731435826 8 88.02020818406405 3.698401424922005 6.168334079312856 2.113056311701101 9 82.20499282430978 6.771041172785493 7.655922278262562 3.3680437246421597 10 41.93051411134268 34.4469727942214 13.302514300006674 10.319998794429246 11 33.64988698752723 23.25340490561614 26.289505682720005 16.807202424136623 12 32.31131203087201 22.0193779842035 27.703467953443834 17.965842031480662 13 25.396072070428815 28.36208926194606 27.348587848042506 18.89325081958262 14 19.204996542791008 31.798298618701654 29.152051241454096 19.84465359705324 15 18.405483937824645 28.247697036938025 36.23252876489863 17.1142902603387 16 23.024757452276717 26.21182856705586 33.71809176154828 17.04532221911914 17 23.504656810603855 24.74093439170442 27.532241678577225 24.222167119114502 18 23.877405196831933 26.8952854159405 30.01156839079594 19.215740996431627 19 27.58030794112979 26.728423463773087 26.630216417564306 19.06105217753282 20 28.278325579647618 26.737015112494824 27.31024834953254 17.674410958325023 21 26.217543285567814 25.473553476554876 30.03753904649922 18.271364191378094 22 24.976294682200002 23.104058957106925 29.676043958710768 22.2436024019823 23 22.332317535594182 27.128786465824316 29.232566145420407 21.306329853161092 24 21.950742649198677 25.814244640445374 32.58984584546814 19.645166864887813 25 21.694147873821365 27.05050265059213 29.75381892914395 21.501530546442556 26 20.99157020306626 31.226102642215757 26.987856027452565 20.794471127265414 27 19.402056476684244 31.05428923873491 30.08991091888955 19.453743365691295 28 18.538253288458442 28.759477479018468 32.79005670292447 19.912212529598623 29 19.44879191437786 27.207187706779358 33.119572852190565 20.224447526652213 30 21.48376012038485 27.183369855994965 31.201619379001894 20.13125064461829 31 25.25539605445657 26.631879948637987 27.654110007939934 20.458613988965503 32 25.928128020654402 27.257915619049815 27.920098841145112 18.893857519150668 33 24.285146448468797 27.331326266783805 28.04883657529445 20.334690709452946 34 21.13332262149795 27.628941761342784 29.682071812483645 21.555663804675618 35 20.76628895378182 27.444955224593333 30.002096049152843 21.786659772472007 36 24.507785618989146 27.25601723653044 28.292631946881304 19.943565197599114 37 21.48203787644974 29.71590999161776 28.616785654803994 20.1852664771285 38 21.654614547129107 30.408173769716022 26.65462139696294 21.28259028619193 39 21.388919278231054 29.179470147739174 28.229280769404653 21.202329804625126 40 23.538436276876546 27.35220847449699 27.572675269144646 21.536679979481814 41 20.262708741346948 26.416384176257573 28.941957052324707 24.37895003007077 42 22.3175218945153 26.22744618819468 27.51382541104385 23.941206506246168 43 22.05313787952238 27.187107908172305 27.348646560903926 23.411107651401387 44 20.541340410712124 28.85482716597128 28.41639865876339 22.187433764553205 45 20.47147210561739 30.130794641394566 27.07465320759126 22.323080045396786 46 22.02530798320734 29.529555369457533 26.834517604366514 21.610619042968615 47 21.286817612214467 28.593652787402878 28.252139643452452 21.867389956930204 48 22.489570149441846 27.036587702434606 29.436691193638342 21.037150954485202 49 21.899134044006853 26.535629997810013 29.80523182479769 21.760004133385443 50 20.59388842168673 29.286210129808264 28.64166033709402 21.47824111141098 51 20.568093904567725 29.240003107867462 27.47153257986466 22.720370407700152 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3062.0 1 5947.5 2 8833.0 3 22901.5 4 36970.0 5 27577.0 6 18184.0 7 17356.5 8 16529.0 9 17040.0 10 17551.0 11 17547.0 12 17543.0 13 17735.0 14 17927.0 15 17105.0 16 16283.0 17 16590.5 18 16898.0 19 16831.0 20 16764.0 21 20380.5 22 23997.0 23 26237.0 24 28477.0 25 34819.0 26 48473.5 27 55786.0 28 66218.0 29 76650.0 30 96216.0 31 115782.0 32 132085.0 33 148388.0 34 169619.0 35 190850.0 36 192233.5 37 193617.0 38 212483.5 39 231350.0 40 271153.5 41 310957.0 42 351131.5 43 391306.0 44 405236.5 45 419167.0 46 405511.0 47 391855.0 48 381474.5 49 371094.0 50 356596.5 51 342099.0 52 328620.5 53 315142.0 54 287297.5 55 259453.0 56 248227.0 57 237001.0 58 225341.5 59 213682.0 60 200479.5 61 187277.0 62 159108.0 63 130939.0 64 114267.5 65 97596.0 66 76563.5 67 55531.0 68 46717.5 69 37904.0 70 31484.0 71 25064.0 72 19323.0 73 13582.0 74 10341.5 75 6196.5 76 5292.0 77 3783.0 78 2274.0 79 1816.0 80 1358.0 81 1067.5 82 777.0 83 521.5 84 266.0 85 203.0 86 140.0 87 99.0 88 58.0 89 51.0 90 44.0 91 34.5 92 25.0 93 17.5 94 10.0 95 11.0 96 12.0 97 8.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5109613.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.196934720091177 #Duplication Level Percentage of deduplicated Percentage of total 1 81.88006540016096 12.443260087630424 2 8.596584718310684 2.6128347355980175 3 2.657755013999785 1.2116918834924926 4 1.1476012500531507 0.6976008512701105 5 0.6870392495268359 0.5220445312599878 6 0.4083508950058903 0.3723409136577193 7 0.2785200785973331 0.2962856016874834 8 0.2066431834489538 0.2512274375380461 9 0.16680742594925 0.22814654066794757 >10 1.469595054432104 5.093227993092897 >50 0.6278378179654097 7.083198061776005 >100 1.8393193492436324 65.35220117253675 >500 0.030375677446793356 2.710777886746227 >1k 0.0033750752718659286 0.7393174070982246 >5k 0.0 0.0 >10k+ 1.2981058737945877E-4 0.3858448959477593 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19559 0.3827882855316048 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.871286142414308E-5 0.0 0.0 0.019825376207552314 0.0 2 5.871286142414308E-5 0.0 0.0 0.06624767864024145 0.0 3 5.871286142414308E-5 0.0 0.0 0.09677836658079585 0.0 4 5.871286142414308E-5 0.0 0.0 0.16001211833459794 0.0 5 5.871286142414308E-5 0.0 0.0 0.29419057764257295 0.0 6 5.871286142414308E-5 0.0 0.0 0.414043098763057 0.0 7 5.871286142414308E-5 0.0 0.0 0.4888432842174153 0.0 8 7.828381523219078E-5 0.0 0.0 0.6342946129188257 0.0 9 7.828381523219078E-5 0.0 0.0 0.683613416515106 0.0 10 9.785476904023846E-5 0.0 0.0 0.7782976910384407 0.0 11 9.785476904023846E-5 0.0 0.0 0.9326538037225128 0.0 12 9.785476904023846E-5 0.0 0.0 1.0507840809078888 0.0 13 9.785476904023846E-5 0.0 0.0 1.1001811683194012 0.0 14 9.785476904023846E-5 0.0 0.0 1.121826643231102 0.0 15 9.785476904023846E-5 0.0 0.0 1.1586004654364235 0.0 16 1.1742572284828616E-4 0.0 0.0 1.236747283991958 0.0 17 1.1742572284828616E-4 0.0 0.0 1.3354240330921343 0.0 18 1.1742572284828616E-4 0.0 0.0 1.4573706462700795 0.0 19 1.1742572284828616E-4 0.0 0.0 1.5303311620664815 0.0 20 1.1742572284828616E-4 0.0 0.0 1.6092216768667216 0.0 21 1.1742572284828616E-4 0.0 0.0 1.709131396056805 0.0 22 1.1742572284828616E-4 0.0 0.0 1.815362533326888 0.0 23 1.1742572284828616E-4 0.0 0.0 1.9267799733561035 0.0 24 1.1742572284828616E-4 1.9570953808047694E-5 0.0 2.010993787592133 0.0 25 1.1742572284828616E-4 1.9570953808047694E-5 0.0 2.089140606147667 0.0 26 1.1742572284828616E-4 1.9570953808047694E-5 0.0 2.1661131674747187 0.0 27 1.3699667665633384E-4 1.9570953808047694E-5 0.0 2.2481154639304384 0.0 28 1.3699667665633384E-4 1.9570953808047694E-5 0.0 2.3305287504161276 0.0 29 1.3699667665633384E-4 1.9570953808047694E-5 0.0 2.4279921003802047 0.0 30 1.3699667665633384E-4 1.9570953808047694E-5 0.0 2.5394291113632286 0.0 31 1.3699667665633384E-4 1.9570953808047694E-5 0.0 2.640943648765572 0.0 32 1.5656763046438155E-4 1.9570953808047694E-5 0.0 2.7396986816809807 0.0 33 1.5656763046438155E-4 1.9570953808047694E-5 0.0 2.836868467337937 0.0 34 1.5656763046438155E-4 1.9570953808047694E-5 0.0 2.946720231062509 0.0 35 1.5656763046438155E-4 1.9570953808047694E-5 0.0 3.06770786750386 0.0 36 1.5656763046438155E-4 1.9570953808047694E-5 0.0 3.17928187516354 0.0 37 1.5656763046438155E-4 1.9570953808047694E-5 0.0 3.2961204693975845 0.0 38 1.5656763046438155E-4 1.9570953808047694E-5 0.0 3.4254257612073555 0.0 39 1.5656763046438155E-4 1.9570953808047694E-5 0.0 3.6112715385685767 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGT 20 7.035571E-4 45.0 41 CTATGCG 310 0.0 42.822582 1 CGGTCTA 765 0.0 42.058823 31 TCGTTAG 160 0.0 40.78125 1 CACGACG 830 0.0 40.391563 26 CGTTTTT 12170 0.0 40.15612 1 GCGATAT 275 0.0 40.090908 9 CTATCGA 90 0.0 40.000004 13 TACGGGA 2040 0.0 39.816177 4 TACGGGT 300 0.0 39.750004 4 ATTACGC 125 0.0 39.6 12 CGCTTAT 80 0.0 39.375 35 CTATTCG 75 0.0 39.000004 39 CGGGTAT 455 0.0 38.57143 6 GTACGGG 1595 0.0 38.087776 3 ACGGGAT 2340 0.0 38.076923 5 TACGCTA 65 9.094947E-12 38.07692 13 TTCGGTA 130 0.0 38.07692 35 GGGCGAT 4930 0.0 38.062878 7 ACGGGAC 1750 0.0 38.057144 5 >>END_MODULE