##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547515_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1670980 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.595081927970412 31.0 31.0 33.0 30.0 34.0 2 32.0143664197058 31.0 31.0 34.0 30.0 34.0 3 32.04204718189326 33.0 31.0 34.0 30.0 34.0 4 35.77096793498426 37.0 35.0 37.0 35.0 37.0 5 35.71504685872961 37.0 35.0 37.0 33.0 37.0 6 35.76527726244479 37.0 35.0 37.0 35.0 37.0 7 36.122054722378486 37.0 35.0 37.0 35.0 37.0 8 36.143425415025916 37.0 35.0 37.0 35.0 37.0 9 38.0000365055237 39.0 39.0 39.0 35.0 39.0 10 37.47388957378305 39.0 37.0 39.0 35.0 39.0 11 37.08656117966702 39.0 37.0 39.0 33.0 39.0 12 36.151681647895245 37.0 35.0 39.0 32.0 39.0 13 35.71313301176555 37.0 35.0 39.0 31.0 39.0 14 36.72806855857042 38.0 35.0 41.0 31.0 41.0 15 37.007795425438964 38.0 35.0 41.0 32.0 41.0 16 37.155866018743495 38.0 35.0 41.0 33.0 41.0 17 37.086401393194414 38.0 35.0 41.0 32.0 41.0 18 37.00230882476152 38.0 35.0 41.0 32.0 41.0 19 36.971753102969515 38.0 35.0 41.0 32.0 41.0 20 36.84504542244671 38.0 35.0 41.0 32.0 41.0 21 36.683537205711616 38.0 35.0 41.0 32.0 41.0 22 36.565016337717985 38.0 35.0 41.0 31.0 41.0 23 36.57953835473794 38.0 35.0 40.0 32.0 41.0 24 36.42011095285402 38.0 35.0 40.0 31.0 41.0 25 36.31824917114508 37.0 35.0 40.0 31.0 41.0 26 36.254640390668946 37.0 35.0 40.0 31.0 41.0 27 36.2319806341189 37.0 35.0 40.0 31.0 41.0 28 36.27077283989036 37.0 35.0 40.0 31.0 41.0 29 36.258041987336775 37.0 35.0 40.0 31.0 41.0 30 36.24259057559037 37.0 35.0 40.0 31.0 41.0 31 36.11715400543394 37.0 35.0 40.0 31.0 41.0 32 35.94108128164311 37.0 35.0 40.0 30.0 41.0 33 35.837558797831214 37.0 35.0 40.0 30.0 41.0 34 35.73971082837616 37.0 35.0 40.0 30.0 41.0 35 35.572775257633246 37.0 35.0 40.0 30.0 41.0 36 35.417718943374545 37.0 35.0 40.0 29.0 41.0 37 35.38064848172928 37.0 34.0 40.0 29.0 41.0 38 35.2965493303331 37.0 34.0 40.0 29.0 41.0 39 35.28899508073107 37.0 34.0 40.0 28.0 41.0 40 35.11255490789836 37.0 34.0 40.0 27.0 41.0 41 35.07907216124669 36.0 34.0 40.0 27.0 41.0 42 35.06928748399143 36.0 34.0 40.0 27.0 41.0 43 34.96113717698596 36.0 34.0 40.0 27.0 41.0 44 34.804978515601626 36.0 34.0 40.0 26.0 41.0 45 34.698356652982085 36.0 34.0 40.0 26.0 41.0 46 34.668329962058195 36.0 34.0 40.0 26.0 41.0 47 34.600254940214725 35.0 34.0 40.0 26.0 41.0 48 34.51194867682438 35.0 34.0 40.0 26.0 41.0 49 34.46759446552323 36.0 34.0 40.0 25.0 41.0 50 34.347125040395454 35.0 34.0 40.0 24.0 41.0 51 33.956415396952686 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 1.0 12 3.0 13 6.0 14 28.0 15 61.0 16 148.0 17 342.0 18 768.0 19 1396.0 20 2407.0 21 3793.0 22 5799.0 23 8404.0 24 12260.0 25 17632.0 26 23753.0 27 27572.0 28 30129.0 29 33854.0 30 39186.0 31 47528.0 32 59491.0 33 79393.0 34 151670.0 35 277186.0 36 98232.0 37 124335.0 38 203473.0 39 421984.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.684879531771777 24.466420902703803 29.79987791595351 14.048821649570911 2 28.27179260074926 27.063040850279478 30.858179032663468 13.806987516307794 3 28.03648158565632 26.660402877353413 31.651007193383524 13.652108343606745 4 25.485583310392702 27.582137428335468 32.02581718512489 14.906462076146932 5 24.557445331482125 32.244072340782054 29.020455062298772 14.178027265437048 6 21.595351231014135 40.36649151994638 26.937306251421322 11.100850997618164 7 88.61093490047757 3.9077666997809666 6.10869070844654 1.3726076912949288 8 90.14638116554357 2.5207961794874865 5.84327759757747 1.4895450573914708 9 85.54297478126608 5.376844725849502 6.775724425187614 2.3044560676968007 10 50.7262803863601 30.028007516547177 11.071048127446169 8.174663969646554 11 45.27510802044309 19.206094627105053 22.344432608409438 13.17436474404242 12 42.445929933332536 20.38061496846162 23.145579240924487 14.027875857281355 13 23.324456307077284 37.5107421991885 22.89422973344983 16.270571760284383 14 14.365103113143185 42.696621144478094 26.824737579145175 16.11353816323355 15 14.33799327340842 26.15931968066644 46.45998156770278 13.042705478222361 16 17.90823349172342 21.463273049348285 44.96505044943685 15.663443009491438 17 17.500209457922896 21.35333756238854 29.189457683515062 31.956995296173503 18 21.40492405654167 25.320949382996805 33.12690756322637 20.147218997235157 19 28.0079354630217 26.632574896168716 27.32306790027409 18.036421740535495 20 31.91432572502364 25.46248309375337 25.68307220912279 16.940118972100205 21 24.370010413051023 27.135453446480508 29.071263569881147 19.42327257058732 22 22.231504865408322 24.8542172856647 27.58201773809381 25.332260110833165 23 19.556547654669714 29.198613987001636 26.96034662293983 24.284491735388812 24 20.88887957964787 25.033812493267426 36.72910507606315 17.348202851021558 25 17.659577014685993 26.747597218398784 34.97396737244012 20.618858394475097 26 17.145208201175357 35.64082155381872 28.242288956181405 18.97168128882452 27 17.887108164071382 35.62681779554513 29.928305545248897 16.557768495134592 28 15.83376222336593 29.8958694897605 38.14887072256999 16.12149756430358 29 15.58696094507415 26.40983135644951 38.30261283797532 19.700594860501024 30 18.04671510131779 30.569605860034233 32.33467785371459 19.049001184933392 31 27.957725406647594 28.001172964368216 25.971406001268715 18.069695627715472 32 28.92978970424541 28.85252965325737 26.361775724425186 15.855904918072032 33 26.9802152030545 29.57839112377168 25.00532621575363 18.436067457420197 34 20.716884702390214 29.286227243892803 27.73079270847048 22.2660953452465 35 19.585572538270952 28.169756669738717 29.5725263019306 22.672144490059726 36 27.621216292235694 26.287986690445127 28.22547247722893 17.865324540090246 37 20.558055751714562 31.126345019090596 29.601311805048535 18.71428742414631 38 19.119438892147123 33.099438652766636 24.606219104956374 23.174903350129863 39 19.831476139750325 31.393553483584487 28.614226382123064 20.160743994542123 40 23.264431650887506 27.26860884032125 26.625752552394406 22.841206956396846 41 17.385665896659443 25.765119869777013 29.81166740475649 27.037546828807045 42 21.676201989251815 25.98918000215442 27.305652970113346 25.02896503848041 43 23.682449819866186 26.164645896420062 25.75817783576105 24.394726447952696 44 19.629857927683155 31.980933344504425 27.289016026523356 21.100192701289064 45 18.22188176997929 36.64418484960921 23.464912805658955 21.66902057475254 46 22.024739972950005 33.45138780835198 25.13183880118254 19.39203341751547 47 21.6568720152246 29.03182563525596 26.47990999293828 22.83139235658117 48 23.25036804749309 25.527055979126022 30.19102562568074 21.03155034770015 49 20.273312666818274 25.243449951525456 31.29397120252786 23.189266179128413 50 18.73858454320219 32.27788483404948 27.368071431136222 21.615459191612107 51 17.532166752444674 34.506217908053955 24.85463620151049 23.10697913799088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2118.0 1 2541.0 2 2964.0 3 8961.5 4 14959.0 5 11139.5 6 7320.0 7 7283.0 8 7246.0 9 7510.5 10 7775.0 11 7804.5 12 7834.0 13 7457.5 14 7081.0 15 6596.5 16 6112.0 17 5607.0 18 5102.0 19 4889.0 20 4676.0 21 5492.0 22 6308.0 23 8374.5 24 10441.0 25 12073.0 26 15652.5 27 17600.0 28 18702.0 29 19804.0 30 26211.0 31 32618.0 32 36854.0 33 41090.0 34 45746.5 35 50403.0 36 51349.0 37 52295.0 38 64515.5 39 76736.0 40 100768.5 41 124801.0 42 144536.0 43 164271.0 44 168716.5 45 173162.0 46 166454.5 47 159747.0 48 142776.0 49 125805.0 50 116823.0 51 107841.0 52 99348.5 53 90856.0 54 84766.0 55 78676.0 56 70645.0 57 62614.0 58 59426.5 59 56239.0 60 54404.0 61 52569.0 62 44336.0 63 36103.0 64 27948.5 65 19794.0 66 15802.5 67 11811.0 68 8467.5 69 5124.0 70 4229.5 71 3335.0 72 2570.0 73 1805.0 74 1420.0 75 786.5 76 538.0 77 350.5 78 163.0 79 154.0 80 145.0 81 186.5 82 228.0 83 135.0 84 42.0 85 38.5 86 35.0 87 30.0 88 25.0 89 19.0 90 13.0 91 14.5 92 16.0 93 8.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1670980.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.84904259222488 #Duplication Level Percentage of deduplicated Percentage of total 1 82.17040501752702 13.023222489431546 2 8.54495940328843 2.708588510631017 3 2.5463577561749475 1.2107199759797675 4 1.0885159948469965 0.6900774545859234 5 0.6532002948900959 0.517629964748349 6 0.41263220998721883 0.3923895282606787 7 0.30422255456726693 0.33751453573964496 8 0.21240816111843877 0.269317279400184 9 0.15578690067040932 0.22221659016324213 >10 1.3867996527928854 4.96629640477176 >50 0.6302294444287135 7.420800713726039 >100 1.8766495068323075 65.69766849634898 >500 0.01593596427152384 1.5700819748365666 >1k 0.0015177108830022703 0.44289914376924866 >5k 3.7942772075056757E-4 0.5305769376070715 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8823 0.5280135010592587 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3650 0.21843469101964114 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1680 0.10053980298986225 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.196902416545979E-4 0.0 0.0 0.03530862128810638 0.0 2 1.196902416545979E-4 0.0 0.0 0.13812253886940598 0.0 3 1.196902416545979E-4 0.0 0.0 0.19557385486361298 0.0 4 1.196902416545979E-4 0.0 0.0 0.3578139774264204 0.0 5 1.196902416545979E-4 0.0 0.0 0.6259201187327197 0.0 6 1.7953536248189686E-4 0.0 0.0 0.8721229458162276 0.0 7 1.7953536248189686E-4 0.0 0.0 1.0098265688398425 0.0 8 1.7953536248189686E-4 0.0 0.0 1.2918167781780752 0.0 9 1.7953536248189686E-4 0.0 0.0 1.3621347951501515 0.0 10 1.7953536248189686E-4 0.0 0.0 1.5507067708769704 0.0 11 1.7953536248189686E-4 0.0 0.0 1.762618343726436 0.0 12 1.7953536248189686E-4 0.0 0.0 1.953584124286347 0.0 13 1.7953536248189686E-4 0.0 0.0 2.019832673042167 0.0 14 1.7953536248189686E-4 0.0 0.0 2.0463440615686603 0.0 15 1.7953536248189686E-4 0.0 0.0 2.0955367508887 0.0 16 1.7953536248189686E-4 0.0 0.0 2.1949394965828435 0.0 17 1.7953536248189686E-4 0.0 0.0 2.321930842978372 0.0 18 1.7953536248189686E-4 0.0 0.0 2.485308022836898 0.0 19 1.7953536248189686E-4 0.0 0.0 2.5693904175992532 0.0 20 1.7953536248189686E-4 0.0 0.0 2.647248919795569 0.0 21 1.7953536248189686E-4 0.0 0.0 2.761792481059019 0.0 22 1.7953536248189686E-4 0.0 0.0 2.8855521909298734 0.0 23 1.7953536248189686E-4 0.0 0.0 3.0248716322158256 0.0 24 1.7953536248189686E-4 0.0 0.0 3.118110330464757 0.0 25 1.7953536248189686E-4 0.0 0.0 3.201295048414703 0.0 26 1.7953536248189686E-4 0.0 0.0 3.2810685944774924 0.0 27 1.7953536248189686E-4 0.0 0.0 3.3568325174448526 0.0 28 1.7953536248189686E-4 0.0 0.0 3.4433087170402996 0.0 29 1.7953536248189686E-4 0.0 0.0 3.532717327556284 0.0 30 1.7953536248189686E-4 0.0 0.0 3.663957677530551 0.0 31 2.393804833091958E-4 0.0 0.0 3.789452895905397 0.0 32 2.393804833091958E-4 0.0 0.0 3.892326658607524 0.0 33 2.393804833091958E-4 0.0 0.0 3.9990305090425977 0.0 34 2.393804833091958E-4 0.0 0.0 4.106153275323463 0.0 35 2.393804833091958E-4 0.0 0.0 4.241522938634813 0.0 36 2.393804833091958E-4 0.0 0.0 4.356545260864881 0.0 37 2.393804833091958E-4 0.0 0.0 4.476235502519479 0.0 38 2.393804833091958E-4 0.0 0.0 4.596703730744832 0.0 39 2.393804833091958E-4 0.0 0.0 4.723395851536225 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGCA 75 0.0 45.000004 13 ATAGCGC 75 0.0 45.000004 12 ATCGTAG 75 0.0 45.000004 1 CGTCGGG 75 0.0 45.000004 3 TATCACG 40 6.8175723E-9 45.0 12 AACGTAG 25 3.8915685E-5 45.0 1 AACGTAC 25 3.8915685E-5 45.0 10 CTATGCG 40 6.8175723E-9 45.0 1 AGCCGAC 50 2.1827873E-11 45.0 26 GTACCGG 20 7.0342066E-4 45.0 2 TCTTGCG 20 7.0342066E-4 45.0 1 CGAACTA 35 1.2123746E-7 45.0 38 TCGCACA 35 1.2123746E-7 45.0 36 TACCCCG 25 3.8915685E-5 45.0 24 ACTGCGC 35 1.2123746E-7 45.0 34 CACGGTT 20 7.0342066E-4 45.0 13 GATCGCG 45 3.8562575E-10 45.0 1 GTCGAAA 20 7.0342066E-4 45.0 12 CGTGCTC 20 7.0342066E-4 45.0 26 CGACGGC 20 7.0342066E-4 45.0 34 >>END_MODULE