##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547514_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2401709 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63148782804245 31.0 31.0 33.0 30.0 34.0 2 32.0622619143285 33.0 31.0 34.0 30.0 34.0 3 32.09211440686611 33.0 31.0 34.0 30.0 34.0 4 35.81896349641026 37.0 35.0 37.0 35.0 37.0 5 35.76033024816912 37.0 35.0 37.0 35.0 37.0 6 35.81514579826282 37.0 35.0 37.0 35.0 37.0 7 36.15453329275112 37.0 35.0 37.0 35.0 37.0 8 36.16241143285885 37.0 35.0 37.0 35.0 37.0 9 37.99705251552124 39.0 39.0 39.0 35.0 39.0 10 37.508877220346015 39.0 37.0 39.0 35.0 39.0 11 37.17463148116612 39.0 37.0 39.0 34.0 39.0 12 36.449924616179565 38.0 35.0 39.0 33.0 39.0 13 36.119334607148495 38.0 35.0 39.0 32.0 39.0 14 37.198754720076415 39.0 35.0 41.0 32.0 41.0 15 37.3839299432196 39.0 35.0 41.0 33.0 41.0 16 37.51009510311199 39.0 35.0 41.0 33.0 41.0 17 37.43808721206441 39.0 35.0 41.0 33.0 41.0 18 37.34454965193535 39.0 35.0 41.0 33.0 41.0 19 37.29920194328289 39.0 35.0 41.0 32.0 41.0 20 37.170298316740286 39.0 35.0 41.0 32.0 41.0 21 37.03470570331377 39.0 35.0 41.0 32.0 41.0 22 36.93673421717619 38.0 35.0 41.0 32.0 41.0 23 36.87980475569688 38.0 35.0 41.0 32.0 41.0 24 36.77478495521314 38.0 35.0 41.0 32.0 41.0 25 36.68166917807278 38.0 35.0 41.0 32.0 41.0 26 36.61249968251774 38.0 35.0 41.0 31.0 41.0 27 36.58949189931003 38.0 35.0 41.0 31.0 41.0 28 36.59173530182049 38.0 35.0 41.0 31.0 41.0 29 36.59345366153851 38.0 35.0 41.0 31.0 41.0 30 36.5621384605712 38.0 35.0 40.0 31.0 41.0 31 36.49486719665038 38.0 35.0 41.0 31.0 41.0 32 36.345880371019135 38.0 35.0 41.0 31.0 41.0 33 36.23484402148637 38.0 35.0 41.0 30.0 41.0 34 36.12688881125898 38.0 35.0 41.0 30.0 41.0 35 35.96650260293816 38.0 35.0 41.0 30.0 41.0 36 35.840633898611365 38.0 35.0 41.0 30.0 41.0 37 35.75217230730284 38.0 35.0 41.0 29.0 41.0 38 35.660329790161924 38.0 35.0 41.0 29.0 41.0 39 35.624314602643366 38.0 35.0 40.0 29.0 41.0 40 35.446492476815465 38.0 35.0 40.0 28.0 41.0 41 35.42625855172296 38.0 35.0 40.0 28.0 41.0 42 35.40604586150945 38.0 35.0 40.0 28.0 41.0 43 35.30349888350337 37.0 34.0 40.0 27.0 41.0 44 35.16541471094125 37.0 34.0 40.0 27.0 41.0 45 35.07726581363521 37.0 34.0 40.0 27.0 41.0 46 35.02093883980116 37.0 34.0 40.0 27.0 41.0 47 34.95301512381392 37.0 34.0 40.0 27.0 41.0 48 34.83991482731671 37.0 34.0 40.0 26.0 41.0 49 34.788244121165384 36.0 34.0 40.0 26.0 41.0 50 34.67859886439198 36.0 34.0 40.0 26.0 41.0 51 34.29319788533915 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 14.0 12 9.0 13 17.0 14 24.0 15 47.0 16 161.0 17 374.0 18 887.0 19 1822.0 20 2951.0 21 4752.0 22 7210.0 23 10525.0 24 15728.0 25 22591.0 26 31109.0 27 37301.0 28 40954.0 29 45209.0 30 53109.0 31 63951.0 32 80477.0 33 105757.0 34 196825.0 35 344391.0 36 147977.0 37 192453.0 38 312870.0 39 681904.0 40 306.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.197447734092684 23.860342780911424 30.04635449173901 13.895854993256885 2 29.490292121152063 26.701486316618706 30.020997547996032 13.787224014233198 3 29.233724818452195 25.114199930133086 32.20531713042671 13.446758120988015 4 27.248638365430615 26.60330622902275 31.361043323733224 14.787012081813408 5 23.999035686671448 32.82858164748519 29.108730491495848 14.063652174347515 6 22.460880981001445 41.54970481436344 25.813618552455775 10.175795652179344 7 88.40267492856128 3.9695899877961907 6.0189639960544765 1.6087710875880468 8 89.0974718419259 3.430682068477072 5.696193835306442 1.7756522542905904 9 83.81531651003515 7.039903668595987 6.9498844364575385 2.1948953849113275 10 45.415576991217506 35.36477566599451 11.298787654957366 7.920859687830624 11 41.57181407073047 20.497903784346896 23.214094630115472 14.716187514807164 12 39.64177175502944 20.115176318196752 25.354612069988498 14.888439856785315 13 24.000950989482906 34.247446297615575 25.14967466916267 16.60192804373885 14 16.66962983442207 38.56853598833164 27.54451101278298 17.217323164463306 15 15.749077011411458 28.7845030351304 41.7285774421464 13.737842511311737 16 19.2841430831129 22.468625466282553 42.44898112135983 15.798250329244718 17 19.301339171398364 22.92188604031546 28.605214037171027 29.171560751115145 18 21.24516333993835 27.69182278119456 31.662495331449396 19.400518547417693 19 27.84796159734589 26.69748916292523 26.389458506421885 19.06509073330699 20 31.269650070012645 25.76998295796868 26.115153834207227 16.84521313781145 21 24.687920143531127 26.754032232880835 29.295347604559918 19.262700019028117 22 24.63312582831642 24.945486734654367 27.44516508869309 22.976222348336123 23 21.04763732825251 28.809776704838097 28.249967002663517 21.892618964245877 24 21.7593388707791 25.896601128613 34.69966594620747 17.64439405440043 25 19.931015789173458 27.570617422843487 31.55307324909054 20.945293538892514 26 18.27261337655811 35.57991413614222 26.4027823520668 19.74469013523287 27 19.90170332875465 34.49289651660546 28.315753490535283 17.289646664104602 28 15.941939677121583 31.058550390576045 35.79934121910689 17.20016871319548 29 17.690694418016502 27.753820300461047 34.71586274606957 19.83962253545288 30 19.054098560649937 30.148864829169565 31.7099615315594 19.087075078621098 31 27.189888533540074 27.922533495939767 25.967300784566323 18.920277185953836 32 27.311593536102833 29.080500593535685 27.023715196137417 16.584190674224065 33 25.521909606867442 30.508275565441107 25.945108254164012 18.024706573527435 34 20.495530474341397 29.945467997996428 28.138005062228604 21.42099646543357 35 20.310120834788894 27.823978675185046 29.997764092152714 21.868136397873347 36 27.575572227942686 26.998441526429723 27.144420910276807 18.281565335350784 37 21.36641033530707 31.91423274010298 29.13737675963241 17.581980164957535 38 20.276644672606047 32.20635805586772 25.135434809129663 22.381562462396566 39 21.292462991977796 30.177261275200284 28.380457415948396 20.149818316873528 40 22.89969350991315 28.13138477642379 27.137384254295586 21.831537459367475 41 18.144412999243457 27.244308115596024 29.35976007084955 25.251518814310973 42 21.86347305189763 28.480302984249967 26.150628573236805 23.5055953906156 43 23.656363031491328 26.340743195782668 26.91262763307295 23.090266139653057 44 20.647921958905098 31.31928139503995 28.255129992850925 19.777666653204033 45 20.013790180242484 34.16059147881779 24.69095964581887 21.13465869512085 46 22.904107033783028 32.191410366534825 24.735261432588214 20.16922116709393 47 22.15235068028641 29.39956505971373 26.8200269058408 21.628057354159058 48 22.818876058673222 26.860664635057784 29.697769380053952 20.622689926215042 49 20.29683862616162 26.291403329878847 30.441822885287102 22.969935158672428 50 19.09777579215467 30.94334076276518 28.899671025923624 21.059212419156527 51 20.013457084101365 31.53850029291642 25.47585906535721 22.97218355762501 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2123.0 1 3135.5 2 4148.0 3 13194.0 4 22240.0 5 16565.5 6 10891.0 7 10557.5 8 10224.0 9 10371.5 10 10519.0 11 10401.0 12 10283.0 13 10044.5 14 9806.0 15 9229.0 16 8652.0 17 8369.0 18 8086.0 19 9160.0 20 10234.0 21 10615.0 22 10996.0 23 11205.5 24 11415.0 25 15252.5 26 22010.0 27 24930.0 28 32865.5 29 40801.0 30 47933.0 31 55065.0 32 60488.5 33 65912.0 34 69559.0 35 73206.0 36 84090.0 37 94974.0 38 103200.0 39 111426.0 40 142512.5 41 173599.0 42 197387.5 43 221176.0 44 220247.0 45 219318.0 46 209329.5 47 199341.0 48 186492.0 49 173643.0 50 159716.5 51 145790.0 52 136041.0 53 126292.0 54 121043.0 55 115794.0 56 106044.5 57 96295.0 58 95615.0 59 94935.0 60 87912.0 61 80889.0 62 69001.0 63 57113.0 64 44349.0 65 31585.0 66 26089.5 67 20594.0 68 16935.5 69 13277.0 70 10629.5 71 7982.0 72 6153.0 73 4324.0 74 3177.0 75 1646.0 76 1262.0 77 928.0 78 594.0 79 442.5 80 291.0 81 299.0 82 307.0 83 191.5 84 76.0 85 67.0 86 58.0 87 43.5 88 29.0 89 20.5 90 12.0 91 18.5 92 25.0 93 40.0 94 55.0 95 28.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2401709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.32683638136533 #Duplication Level Percentage of deduplicated Percentage of total 1 81.80481835642702 12.53809066156268 2 8.82126102882814 2.7040404893232655 3 2.5635199270505464 1.1787195144681992 4 1.1575756318966313 0.7096788923654099 5 0.6097598957206587 0.46728450768144614 6 0.3867244429259775 0.3556357356840667 7 0.2844310557124492 0.3051599776878601 8 0.19278996161067974 0.2363888158061273 9 0.16532129492111883 0.2280467193850288 >10 1.4228005967499737 5.074186857691059 >50 0.68891582280519 7.844253804741346 >100 1.8750924315965694 64.20707764071678 >500 0.021537118653059257 2.182685974725253 >1k 0.005179813346938303 1.4406805467877557 >5k 0.0 0.0 >10k+ 2.726217551020159E-4 0.5280698613736958 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12638 0.5262086289388098 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4402 0.18328615165284387 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3878 0.16146835440929772 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3545 0.14760322753505942 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2610 0.10867261604132723 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6654807056142105E-4 0.0 0.0 0.022400715490511133 0.0 2 1.6654807056142105E-4 0.0 0.0 0.08710464090362321 0.0 3 1.6654807056142105E-4 0.0 0.0 0.12545233415039042 0.0 4 1.6654807056142105E-4 0.0 0.0 0.23279256562722628 0.0 5 1.6654807056142105E-4 0.0 0.0 0.3978833405712349 0.0 6 1.6654807056142105E-4 0.0 0.0 0.5708018748316304 0.0 7 1.6654807056142105E-4 0.0 0.0 0.6609043810053591 0.0 8 1.6654807056142105E-4 0.0 0.0 0.861303346908389 0.0 9 1.6654807056142105E-4 0.0 0.0 0.9192204384461231 0.0 10 1.6654807056142105E-4 0.0 0.0 1.0401343376737149 0.0 11 2.081850882017763E-4 0.0 0.0 1.219215150544883 0.0 12 2.081850882017763E-4 0.0 0.0 1.3676511184327493 0.0 13 2.081850882017763E-4 0.0 0.0 1.4236945441766675 0.0 14 2.081850882017763E-4 0.0 0.0 1.4479272884433543 0.0 15 2.081850882017763E-4 0.0 0.0 1.48727427011349 0.0 16 2.081850882017763E-4 0.0 0.0 1.5702152092530777 0.0 17 2.081850882017763E-4 0.0 0.0 1.6725173615954305 0.0 18 2.081850882017763E-4 0.0 0.0 1.8067967434855763 0.0 19 2.081850882017763E-4 0.0 0.0 1.8853657957729266 0.0 20 2.081850882017763E-4 0.0 0.0 1.9652672326247684 0.0 21 2.081850882017763E-4 0.0 0.0 2.0666950075966737 0.0 22 2.081850882017763E-4 0.0 0.0 2.17994769557844 0.0 23 2.081850882017763E-4 0.0 0.0 2.2961149747950316 0.0 24 2.081850882017763E-4 0.0 0.0 2.3808879427107947 0.0 25 2.081850882017763E-4 0.0 0.0 2.452045605858162 0.0 26 2.081850882017763E-4 0.0 0.0 2.5254933049757486 0.0 27 2.081850882017763E-4 0.0 0.0 2.594694028294019 0.0 28 2.081850882017763E-4 0.0 0.0 2.673679450757773 0.0 29 2.081850882017763E-4 0.0 0.0 2.7569534860384834 0.0 30 2.081850882017763E-4 0.0 0.0 2.8591723643455556 0.0 31 2.081850882017763E-4 0.0 0.0 2.961058146511505 0.0 32 2.081850882017763E-4 0.0 0.0 3.053742147778936 0.0 33 2.081850882017763E-4 0.0 0.0 3.1432617357056998 0.0 34 2.081850882017763E-4 0.0 0.0 3.2434404001483945 0.0 35 2.081850882017763E-4 0.0 0.0 3.3614813451588015 0.0 36 2.081850882017763E-4 0.0 0.0 3.4789393719222437 0.0 37 2.081850882017763E-4 0.0 0.0 3.590318394110194 0.0 38 2.081850882017763E-4 0.0 0.0 3.7021970605098287 0.0 39 2.081850882017763E-4 0.0 0.0 3.8179479695500165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 30 2.1664928E-6 45.000004 1 ATTACGC 30 2.1664928E-6 45.000004 41 GCGCAAC 60 0.0 45.000004 27 CCGTCGA 30 2.1664928E-6 45.000004 24 ATATCGT 30 2.1664928E-6 45.000004 11 CGAGCAA 30 2.1664928E-6 45.000004 33 CACCGTA 45 3.8562575E-10 45.000004 25 TATCGGT 30 2.1664928E-6 45.000004 28 ATACCCG 30 2.1664928E-6 45.000004 22 ACGACTA 45 3.8562575E-10 45.000004 10 TACGTGC 30 2.1664928E-6 45.000004 1 TACCGTA 30 2.1664928E-6 45.000004 45 CTTCGTA 40 6.8212103E-9 45.0 12 AAACTCG 25 3.89208E-5 45.0 39 GGTACGT 20 7.0348236E-4 45.0 9 CGTATTA 50 2.1827873E-11 45.0 13 CCCTCGA 25 3.89208E-5 45.0 23 CGTATCA 25 3.89208E-5 45.0 11 CACGGTA 20 7.0348236E-4 45.0 18 GATCGAC 80 0.0 45.0 9 >>END_MODULE