##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547512_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3683039 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.592375209711328 31.0 31.0 33.0 30.0 34.0 2 32.020451317512524 33.0 31.0 34.0 30.0 34.0 3 31.9602762827111 33.0 31.0 34.0 30.0 34.0 4 35.754003147943855 37.0 35.0 37.0 35.0 37.0 5 35.734491272017486 37.0 35.0 37.0 33.0 37.0 6 35.805873356214796 37.0 35.0 37.0 35.0 37.0 7 36.14468785152696 37.0 35.0 37.0 35.0 37.0 8 36.156520742788764 37.0 35.0 37.0 35.0 37.0 9 38.01344406073354 39.0 39.0 39.0 35.0 39.0 10 37.50020051376051 39.0 37.0 39.0 35.0 39.0 11 37.155077641045885 39.0 37.0 39.0 33.0 39.0 12 36.85328610421991 39.0 35.0 39.0 33.0 39.0 13 36.739851519356705 39.0 35.0 39.0 33.0 39.0 14 37.9243839123072 40.0 36.0 41.0 33.0 41.0 15 38.03492849247591 40.0 36.0 41.0 33.0 41.0 16 38.06310902491122 40.0 36.0 41.0 33.0 41.0 17 37.96645297538256 40.0 36.0 41.0 33.0 41.0 18 37.81196805138365 39.0 36.0 41.0 33.0 41.0 19 37.75405364971699 39.0 36.0 41.0 33.0 41.0 20 37.62282207709448 39.0 35.0 41.0 33.0 41.0 21 37.51031987442978 39.0 35.0 41.0 33.0 41.0 22 37.436315227723625 39.0 35.0 41.0 33.0 41.0 23 37.35402801870955 39.0 35.0 41.0 32.0 41.0 24 37.24254073877578 39.0 35.0 41.0 32.0 41.0 25 37.16473298273518 39.0 35.0 41.0 32.0 41.0 26 37.132972526220875 39.0 35.0 41.0 32.0 41.0 27 37.09817164575232 39.0 35.0 41.0 32.0 41.0 28 37.05995646529944 39.0 35.0 41.0 32.0 41.0 29 37.01683256680149 39.0 35.0 41.0 32.0 41.0 30 36.94992694891366 39.0 35.0 41.0 31.0 41.0 31 36.86585425785608 39.0 35.0 41.0 31.0 41.0 32 36.70247477694372 39.0 35.0 41.0 31.0 41.0 33 36.55042751380042 39.0 35.0 41.0 30.0 41.0 34 36.36126633467634 39.0 35.0 41.0 30.0 41.0 35 36.152456164596686 39.0 35.0 41.0 29.0 41.0 36 36.03453506737235 39.0 35.0 41.0 29.0 41.0 37 35.996268027571794 39.0 35.0 41.0 29.0 41.0 38 35.8714276443991 39.0 35.0 41.0 28.0 41.0 39 35.80118945251462 39.0 35.0 41.0 27.0 41.0 40 35.68457814321271 39.0 35.0 41.0 27.0 41.0 41 35.61684087515771 39.0 35.0 41.0 26.0 41.0 42 35.57786246629482 39.0 35.0 41.0 26.0 41.0 43 35.493910870886786 38.0 35.0 41.0 26.0 41.0 44 35.36607432069006 38.0 35.0 41.0 26.0 41.0 45 35.27938829863056 38.0 34.0 40.0 25.0 41.0 46 35.21807100060575 38.0 34.0 40.0 25.0 41.0 47 35.167996591944856 38.0 34.0 40.0 24.0 41.0 48 35.02875967373682 38.0 34.0 40.0 24.0 41.0 49 34.939706313183216 38.0 34.0 40.0 24.0 41.0 50 34.868842279432826 38.0 34.0 40.0 24.0 41.0 51 34.494961633585746 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 5.0 11 15.0 12 14.0 13 26.0 14 53.0 15 100.0 16 227.0 17 551.0 18 1282.0 19 2376.0 20 4336.0 21 6894.0 22 10885.0 23 16425.0 24 24852.0 25 38002.0 26 54283.0 27 63249.0 28 65059.0 29 69113.0 30 76794.0 31 91081.0 32 111866.0 33 143482.0 34 229821.0 35 342713.0 36 248207.0 37 331100.0 38 547215.0 39 1202660.0 40 350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.232685833628153 24.132217986287955 29.37527949065975 15.259816689424142 2 32.11717280213433 25.153439863113043 29.81630115782103 12.913086176931603 3 27.98865284891091 24.543671679827447 34.431864555330534 13.035810915931108 4 24.586869701895637 27.577307761335135 33.791143672385765 14.044678864383462 5 23.30173533323975 31.092937109816106 31.41136979543252 14.193957761511623 6 22.191918141513028 39.2430001420023 28.29169063917053 10.273391077314143 7 87.52342834273544 3.0758838013933603 7.941023703523096 1.4596641523481015 8 88.29996098330753 2.5497422101693736 7.770186522597236 1.3801102839258557 9 83.62393121549894 5.6451207820498235 8.670964385660863 2.0599836167903733 10 38.19514265257576 40.470817713306865 13.207272581148342 8.12676705296903 11 26.74269808166571 24.225103236756386 32.1682990595538 16.863899622024096 12 26.939845057301863 23.310912537173785 32.19732400335701 17.551918402167342 13 23.875093367189432 26.16928574473417 31.316719698053703 18.638901190022697 14 16.985185332004356 30.549988745707008 32.53307934018619 19.931746582102445 15 17.508421713698933 29.078187876913603 36.862221659884675 16.551168749502786 16 22.70049271810589 27.87754894802906 33.68128874008665 15.740669593778398 17 21.936232551433747 26.7137545923353 30.42267540474049 20.92733745149047 18 21.57069202905535 27.636389405596844 32.43590415415096 18.35701441119684 19 23.617018445908393 28.474474476105193 30.20671244589047 17.70179463209594 20 25.963178777091418 28.181890009853277 29.785158397725358 16.069772815329948 21 24.616926402354142 26.26988201862647 32.72370995799936 16.389481621020032 22 23.302767089895056 22.854740338074077 33.915334591895444 19.927157980135426 23 20.375021823010833 26.645495744139552 33.20244504606114 19.777037386788464 24 19.459907972736644 27.028494675185357 35.80920538718162 17.70239196489638 25 19.595502518436543 28.930212251350042 32.441687421718854 19.03259780849456 26 19.584424710137473 32.03175421167139 30.041251260168572 18.34256981802256 27 18.40708176047009 30.702362912801085 32.59259540830276 18.29795991842606 28 17.239160378155105 29.617660850183775 35.0437505549086 18.099428216752525 29 18.726138930377875 26.995098341342572 35.10685061982781 19.171912108451743 30 19.72800179417052 28.3211500068286 33.02987016971583 18.920978029285056 31 22.63940186351543 27.46517210379798 30.738854516609788 19.156571516076806 32 23.072685355761912 28.121287882099537 31.003853068077746 17.8021736940608 33 22.686428245804617 27.426861350097028 30.69147516493852 19.195235239159835 34 19.846789566985308 28.336897871567473 31.658774180778426 20.15753838066879 35 19.683853469919814 28.30518493016229 32.10519899463459 19.9057626052833 36 22.74735619144951 28.129487632360124 30.254336160980106 18.868820015210268 37 20.346838575426435 29.72564232960878 30.761797526444873 19.16572156851991 38 19.781490231300836 30.630221401402487 29.3497570891864 20.238531278110276 39 19.795337491674676 29.454398935227132 30.794080649159568 19.956182923938627 40 21.78994031830779 28.25859297172797 29.77375477153514 20.17771193842911 41 19.776467205478955 27.928159327120895 30.527045735871926 21.76832773152823 42 20.004186759901266 28.23603008276589 29.674271708770938 22.085511448561906 43 20.754300999799348 27.936820652727274 29.645111007513087 21.663767339960287 44 19.657733735646023 29.21712205599778 30.11059616800148 21.01454804035472 45 19.21269364782724 30.807547788660393 29.477341945062218 20.502416618450145 46 20.61493239686031 29.698083566315752 29.54668685289512 20.140297183928816 47 20.074454818425764 28.77987444607565 30.424548857614596 20.721121877883995 48 20.369292858424796 27.565605468744696 31.92811697079504 20.136984702035466 49 20.59606211066459 27.337831611340523 31.6670553855118 20.399050892483082 50 19.730092458972063 29.414513395052293 30.546187536976937 20.309206608998707 51 19.15757612124118 30.15273528192343 29.476798915243634 21.21288968159175 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2106.0 1 3652.5 2 5199.0 3 34513.0 4 63827.0 5 44829.0 6 25831.0 7 23912.5 8 21994.0 9 22396.0 10 22798.0 11 22925.0 12 23052.0 13 22194.5 14 21337.0 15 20599.5 16 19862.0 17 19271.0 18 18680.0 19 18391.0 20 18102.0 21 20213.5 22 22325.0 23 24503.5 24 26682.0 25 33366.5 26 46551.5 27 53052.0 28 65832.5 29 78613.0 30 93119.5 31 107626.0 32 115617.5 33 123609.0 34 139107.5 35 154606.0 36 164266.0 37 173926.0 38 189997.0 39 206068.0 40 220397.5 41 234727.0 42 259191.0 43 283655.0 44 289452.0 45 295249.0 46 286773.0 47 278297.0 48 267687.5 49 257078.0 50 243802.5 51 230527.0 52 214323.0 53 198119.0 54 187569.5 55 177020.0 56 157510.5 57 138001.0 58 126344.0 59 114687.0 60 101747.0 61 88807.0 62 74442.5 63 60078.0 64 49003.0 65 37928.0 66 31683.5 67 25439.0 68 20100.0 69 14761.0 70 11395.0 71 8029.0 72 6652.5 73 5276.0 74 4038.0 75 2123.5 76 1447.0 77 1187.0 78 927.0 79 647.0 80 367.0 81 290.0 82 213.0 83 159.5 84 106.0 85 90.5 86 75.0 87 53.0 88 31.0 89 29.5 90 28.0 91 21.0 92 14.0 93 10.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3683039.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.490670034003255 #Duplication Level Percentage of deduplicated Percentage of total 1 81.11410047968583 14.187399665951702 2 7.229070277009328 2.528825657355813 3 2.2058826876147566 1.1574709866836996 4 1.1867881807055374 0.8303088187590233 5 0.7855338163798589 0.6869756391425708 6 0.5120850675333698 0.5374026567339868 7 0.39733780025501647 0.48647930494080316 8 0.30187474259817226 0.4223993211507438 9 0.25547099598644873 0.402152300465143 >10 2.9552727421063554 12.620503803238273 >50 1.4166909678494024 18.051807056712843 >100 1.636751026146148 46.549926964610144 >500 0.002355912097276021 0.2897365042665075 >1k 6.282432259402724E-4 0.18979705205056419 >5k 0.0 0.0 >10k+ 1.570608064850681E-4 1.0588142679381813 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38543 1.046499914880076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.145447278728246E-5 0.0 0.0 0.01596507666630736 0.0 2 8.145447278728246E-5 0.0 0.0 0.05223946854757715 0.0 3 8.145447278728246E-5 0.0 0.0 0.08188889664214796 0.0 4 8.145447278728246E-5 0.0 0.0 0.13087018627823382 0.0 5 8.145447278728246E-5 0.0 0.0 0.2592695868819201 0.0 6 8.145447278728246E-5 0.0 0.0 0.4116166024850674 0.0 7 8.145447278728246E-5 0.0 0.0 0.5054793066269458 0.0 8 8.145447278728246E-5 0.0 0.0 0.6777012135901901 0.0 9 8.145447278728246E-5 0.0 0.0 0.7478878176418985 0.0 10 8.145447278728246E-5 0.0 0.0 0.8620869884896685 0.0 11 8.145447278728246E-5 0.0 0.0 0.9986046848811538 0.0 12 8.145447278728246E-5 0.0 0.0 1.1062331949240831 0.0 13 8.145447278728246E-5 0.0 0.0 1.151467578811954 0.0 14 8.145447278728246E-5 0.0 0.0 1.1766098594122951 0.0 15 8.145447278728246E-5 0.0 0.0 1.2079155284535408 0.0 16 8.145447278728246E-5 0.0 0.0 1.266236930969235 0.0 17 8.145447278728246E-5 0.0 0.0 1.345274921063828 0.0 18 8.145447278728246E-5 0.0 0.0 1.4376442932046063 0.0 19 8.145447278728246E-5 0.0 0.0 1.5025635080160704 0.0 20 8.145447278728246E-5 0.0 0.0 1.5709309621755294 0.0 21 8.145447278728246E-5 0.0 0.0 1.6546390087099268 0.0 22 8.145447278728246E-5 0.0 0.0 1.7609099442064013 0.0 23 8.145447278728246E-5 0.0 0.0 1.8634068224637317 0.0 24 8.145447278728246E-5 0.0 0.0 1.9441553564868577 0.0 25 8.145447278728246E-5 0.0 0.0 2.0182246237414265 0.0 26 1.086059637163766E-4 0.0 0.0 2.0885469852477803 0.0 27 1.086059637163766E-4 0.0 0.0 2.164245341958095 0.0 28 1.086059637163766E-4 0.0 0.0 2.2471931467464774 0.0 29 1.086059637163766E-4 0.0 0.0 2.342712091835031 0.0 30 1.3575745464547076E-4 0.0 0.0 2.4519153883518476 0.0 31 1.3575745464547076E-4 0.0 0.0 2.54925348333265 0.0 32 1.3575745464547076E-4 0.0 0.0 2.6419758248555065 0.0 33 1.3575745464547076E-4 0.0 0.0 2.73358495525027 0.0 34 1.3575745464547076E-4 0.0 0.0 2.8359732275438843 0.0 35 1.3575745464547076E-4 0.0 0.0 2.952480275120627 0.0 36 1.3575745464547076E-4 0.0 0.0 3.057556545016222 0.0 37 1.3575745464547076E-4 0.0 0.0 3.170180929390104 0.0 38 1.3575745464547076E-4 0.0 0.0 3.293231486280759 0.0 39 1.3575745464547076E-4 0.0 0.0 3.452800798471045 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCGA 20 7.0353167E-4 45.0 29 CGTTTTT 18540 0.0 42.961166 1 CTATGCG 160 0.0 42.1875 1 GCGATCG 65 0.0 41.538464 9 ACGGGAT 2175 0.0 39.41379 5 CGAACGG 180 0.0 38.750004 2 CGAGGGA 3175 0.0 38.19685 4 GGGCGAT 3600 0.0 38.125 7 CGGGATA 1245 0.0 37.590363 6 AGGGATT 8690 0.0 37.51726 6 TGCGGGA 3665 0.0 37.51023 4 CGTACTA 30 1.1404105E-4 37.500004 45 CCCGGTA 30 1.1404105E-4 37.500004 22 TAAGGGA 6310 0.0 37.11965 4 TAGACGG 485 0.0 37.113403 2 TAGGGAT 7650 0.0 37.058823 5 AAGGGAT 7365 0.0 37.057026 5 TACGGGA 2180 0.0 36.94954 4 GACCGAT 1225 0.0 36.91837 9 ACGGGAC 1740 0.0 36.85345 5 >>END_MODULE