SRR1547510_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547510_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3164389
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17106	0.5405782917334121	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	4895	0.15469021033760388	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTTCG	45	3.8562575E-10	45.0	29
CGCGATC	20	7.035164E-4	45.0	12
CTCGACA	35	1.2128294E-7	45.0	44
CGTAAAC	40	6.8212103E-9	45.0	34
CCGCGAC	20	7.035164E-4	45.0	11
ACTCCCG	20	7.035164E-4	45.0	36
TATACGT	20	7.035164E-4	45.0	1
TATACGA	25	3.8923623E-5	45.0	17
TAAGCGT	25	3.8923623E-5	45.0	21
TGCGTTA	40	6.8212103E-9	45.0	30
TCCGCGA	30	2.1667129E-6	44.999996	30
CCGCGAA	30	2.1667129E-6	44.999996	31
ATACGCC	30	2.1667129E-6	44.999996	41
TATACGC	30	2.1667129E-6	44.999996	40
TGTCGCG	60	0.0	44.999996	1
CGGTCTA	285	0.0	44.210526	31
TGTTGCG	160	0.0	43.59375	1
CGACGGT	285	0.0	42.63158	28
CCGTACA	70	0.0	41.785713	42
TAAACGG	265	0.0	41.603775	2