##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547510_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3164389 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.635202245994407 31.0 31.0 33.0 30.0 34.0 2 32.066308535391826 33.0 31.0 34.0 30.0 34.0 3 32.11354229837103 33.0 31.0 34.0 30.0 34.0 4 35.832029816814554 37.0 35.0 37.0 35.0 37.0 5 35.77042771922162 37.0 35.0 37.0 35.0 37.0 6 35.83121449354046 37.0 35.0 37.0 35.0 37.0 7 36.17812411811569 37.0 35.0 37.0 35.0 37.0 8 36.196489432873136 37.0 35.0 37.0 35.0 37.0 9 38.05342295147657 39.0 39.0 39.0 35.0 39.0 10 37.52990008497691 39.0 37.0 39.0 35.0 39.0 11 37.12324970160116 39.0 37.0 39.0 33.0 39.0 12 36.64397961186188 39.0 35.0 39.0 33.0 39.0 13 36.441213137828505 39.0 35.0 39.0 32.0 39.0 14 37.60779316322993 40.0 35.0 41.0 33.0 41.0 15 37.772481512228744 40.0 35.0 41.0 33.0 41.0 16 37.84823420887887 40.0 35.0 41.0 33.0 41.0 17 37.782940403344845 40.0 35.0 41.0 33.0 41.0 18 37.64428203991355 39.0 36.0 41.0 33.0 41.0 19 37.62850174235848 39.0 36.0 41.0 33.0 41.0 20 37.52987385558476 39.0 35.0 41.0 33.0 41.0 21 37.42729639118326 39.0 35.0 41.0 33.0 41.0 22 37.32923164629886 39.0 35.0 41.0 32.0 41.0 23 37.27167677551654 39.0 35.0 41.0 32.0 41.0 24 37.155122837299714 39.0 35.0 41.0 32.0 41.0 25 37.07693270328016 39.0 35.0 41.0 32.0 41.0 26 37.035897609301514 39.0 35.0 41.0 32.0 41.0 27 37.01689141252861 39.0 35.0 41.0 32.0 41.0 28 36.99911294091845 39.0 35.0 41.0 32.0 41.0 29 36.99858298079029 39.0 35.0 41.0 32.0 41.0 30 36.95682484043523 39.0 35.0 41.0 32.0 41.0 31 36.88481883864468 39.0 35.0 41.0 31.0 41.0 32 36.73549522514457 39.0 35.0 41.0 31.0 41.0 33 36.66845131872219 39.0 35.0 41.0 31.0 41.0 34 36.59965446726051 39.0 35.0 41.0 31.0 41.0 35 36.45885161400827 39.0 35.0 41.0 30.0 41.0 36 36.33175978048211 39.0 35.0 41.0 30.0 41.0 37 36.28040705488485 39.0 35.0 41.0 30.0 41.0 38 36.16555707910753 39.0 35.0 41.0 30.0 41.0 39 36.135188499264785 38.0 35.0 41.0 30.0 41.0 40 35.997021225898585 38.0 35.0 41.0 29.0 41.0 41 35.980085255004994 38.0 35.0 41.0 29.0 41.0 42 35.969127057387695 38.0 35.0 41.0 29.0 41.0 43 35.86739525387049 38.0 35.0 41.0 29.0 41.0 44 35.733035982617814 38.0 35.0 40.0 29.0 41.0 45 35.63617462960464 38.0 35.0 40.0 28.0 41.0 46 35.572693812296784 38.0 35.0 40.0 28.0 41.0 47 35.507598149279374 38.0 35.0 40.0 28.0 41.0 48 35.39959499290384 38.0 34.0 40.0 27.0 41.0 49 35.323099656837385 38.0 34.0 40.0 27.0 41.0 50 35.22379707425351 38.0 34.0 40.0 27.0 41.0 51 34.86345989699749 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 11.0 13 8.0 14 26.0 15 63.0 16 144.0 17 362.0 18 825.0 19 1752.0 20 3032.0 21 5109.0 22 8061.0 23 11895.0 24 17302.0 25 25910.0 26 35875.0 27 42683.0 28 48315.0 29 54013.0 30 63962.0 31 78173.0 32 97416.0 33 128533.0 34 226539.0 35 374090.0 36 200805.0 37 270287.0 38 453781.0 39 1015020.0 40 397.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.032151862492253 24.499832353101976 30.394556421476626 14.073459362929148 2 28.721152803906218 26.511310714327475 31.77302158489364 12.994514896872666 3 28.455445901246655 25.69409133959194 32.97205242465449 12.878410334506915 4 26.01348949196828 27.059125790160437 32.64285775231806 14.284526965553223 5 23.29814697244871 32.63795949233801 30.74422898069738 13.319664554515894 6 22.27763400770259 41.24805768190952 26.256032365173816 10.218275945214069 7 90.41138747480161 3.3353042246070252 5.050927683037705 1.2023806175536573 8 91.52594703116462 2.6685088337748613 4.723407899597679 1.0821362354628334 9 87.03411622275264 5.871022810406685 5.562716846759359 1.5321441200813175 10 45.15260291955256 38.35678862491306 9.78782949883848 6.702778956695905 11 33.24360563761282 23.209915089453286 28.28994791727566 15.256531355658232 12 32.98918053374601 22.673950642604307 27.87874689237006 16.458121931279624 13 22.987565688036458 31.856292004554433 27.140531710861087 18.015610596548022 14 16.267721825603616 35.540952771609305 29.507054916446744 18.68427048634033 15 16.21333533898645 29.222292202380935 38.3576734718772 16.206698986755423 16 19.142368400345216 26.381143405567393 37.75395502891711 16.722533165170276 17 19.99302234965423 26.16470351780391 27.20326104028297 26.639013092258885 18 20.945117683066147 28.96783549683683 32.1293936997 17.95765312039702 19 25.232770054503412 27.577582907790415 28.65339880779512 18.536248229911052 20 28.26403454189735 27.1526035515861 28.29159120449477 16.29177070202178 21 24.251158754502054 27.729681780590187 29.685762401525224 18.333397063382538 22 24.007035797431982 24.019676468348234 29.902012679224967 22.071275054994818 23 20.300727881433033 27.9264654250789 29.96398356839188 21.80882312509619 24 20.732248784836504 26.5958135994026 34.96441177111917 17.70752584464173 25 19.210217201488184 29.667559835405825 31.175686680746267 19.946536282359723 26 18.782425296005012 35.6579105792619 27.13054558083725 18.429118543895836 27 18.955886902653248 34.51484630998275 29.420403117315853 17.10886367004815 28 17.314242970759917 30.710952414510352 34.95167629517104 17.02312831955869 29 17.901275728110544 26.56936299551035 35.003945469409736 20.52541580696937 30 19.328723491328027 29.58403660232671 33.005992626064625 18.08124728028065 31 26.43372859657899 27.111647777817456 27.597934387965577 18.856689237637976 32 24.560760386918297 28.920148565805277 29.001933706633416 17.51715734064301 33 23.10161614137832 30.7165143097135 27.870309244533466 18.311560304374716 34 20.085773272502212 29.866018368790943 29.24081078527324 20.807397573433608 35 20.777818403489583 28.292918474940976 30.40492177162795 20.524341349941487 36 24.988109868919402 28.770893843961666 28.663195327755215 17.577800959363717 37 21.152614296156383 31.4205996797486 30.326992035429274 17.09979398866574 38 20.05587808578528 31.525928070158255 27.45579004351235 20.96240380054412 39 21.397464091804135 30.126005367860902 28.629444736408832 19.847085803926127 40 22.041095453182276 29.099772499525184 28.80461283363076 20.054519213661784 41 17.970104181249525 28.27240898637936 30.880369006465386 22.877117825905728 42 21.58508324987857 28.463156710505565 27.843163403740817 22.108596635875045 43 22.42442379871754 27.647517419634564 27.966820766979026 21.961238014668865 44 19.45914361350643 31.993190470577414 29.01605965638232 19.53160625953383 45 19.37012168857874 34.746328596136564 26.129404444270282 19.754145271014405 46 22.228619806224835 31.364443499203166 27.204872725824796 19.202063968747204 47 21.626386642097415 29.951753719280404 27.923494867413584 20.498364771208596 48 22.05370452242123 26.9830921545992 30.41200054734105 20.55120277563852 49 20.67618740932294 28.3026201898692 29.53846698367363 21.48272541713424 50 18.329257243657466 31.655874167177295 28.89268670823973 21.12218188092551 51 18.73726649915671 32.17689102066782 27.387909640692087 21.69793283948339 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2248.0 1 3864.5 2 5481.0 3 17177.0 4 28873.0 5 21123.0 6 13373.0 7 12636.5 8 11900.0 9 11983.5 10 12067.0 11 11999.0 12 11931.0 13 11746.0 14 11561.0 15 11187.5 16 10814.0 17 10283.5 18 9753.0 19 10203.0 20 10653.0 21 14247.5 22 17842.0 23 19775.0 24 21708.0 25 26546.5 26 41974.5 27 52564.0 28 62429.5 29 72295.0 30 76421.5 31 80548.0 32 97478.5 33 114409.0 34 120826.5 35 127244.0 36 134676.5 37 142109.0 38 151245.5 39 160382.0 40 198091.0 41 235800.0 42 256093.0 43 276386.0 44 279245.0 45 282104.0 46 275367.5 47 268631.0 48 251241.0 49 233851.0 50 214539.0 51 195227.0 52 180252.5 53 165278.0 54 148691.0 55 132104.0 56 124886.0 57 117668.0 58 113029.5 59 108391.0 60 97462.0 61 86533.0 62 67162.0 63 47791.0 64 37973.5 65 28156.0 66 23356.0 67 18556.0 68 13393.5 69 8231.0 70 6345.0 71 4459.0 72 3659.5 73 2860.0 74 2246.5 75 1266.0 76 899.0 77 606.5 78 314.0 79 210.0 80 106.0 81 118.0 82 130.0 83 87.5 84 45.0 85 52.0 86 59.0 87 39.0 88 19.0 89 13.5 90 8.0 91 6.5 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 1.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3164389.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.016483819920948 #Duplication Level Percentage of deduplicated Percentage of total 1 81.31194520849266 12.210195095896289 2 8.610770729039796 2.5860699865935 3 2.5445793208211476 1.1463190259884857 4 1.1536685504240658 0.6929618048397855 5 0.662914007366337 0.4977318732807778 6 0.42916406009390906 0.3866721098695059 7 0.2981919069600657 0.31344557622680397 8 0.22342038812024004 0.2683990914598434 9 0.17250890769008867 0.23314294990084075 >10 1.759331269514585 6.202762285307416 >50 0.805557887650242 8.986227766710387 >100 2.009765580067872 63.67510853747286 >500 0.015010872638305323 1.4545646005091 >1k 0.0029598903793841484 0.8033186678601746 >5k 0.0 0.0 >10k+ 2.1142074138458207E-4 0.5430806280842645 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17106 0.5405782917334121 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4895 0.15469021033760388 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.320335458124776E-5 0.0 0.0 0.021394335525752366 0.0 2 6.320335458124776E-5 0.0 0.0 0.07587562717478794 0.0 3 6.320335458124776E-5 0.0 0.0 0.10668726253314621 0.0 4 6.320335458124776E-5 0.0 0.0 0.17026983724188144 0.0 5 6.320335458124776E-5 0.0 0.0 0.29986831581073 0.0 6 6.320335458124776E-5 0.0 0.0 0.4179637838457914 0.0 7 6.320335458124776E-5 0.0 0.0 0.4883407191720108 0.0 8 6.320335458124776E-5 0.0 0.0 0.659969428537389 0.0 9 6.320335458124776E-5 0.0 0.0 0.7191277684254369 0.0 10 6.320335458124776E-5 0.0 0.0 0.8436067752732044 0.0 11 6.320335458124776E-5 0.0 0.0 1.0418756985945785 0.0 12 6.320335458124776E-5 0.0 0.0 1.1879070493545516 0.0 13 6.320335458124776E-5 0.0 0.0 1.2448532718322558 0.0 14 6.320335458124776E-5 0.0 0.0 1.2688389448958393 0.0 15 6.320335458124776E-5 0.0 0.0 1.3051808737800568 0.0 16 6.320335458124776E-5 0.0 0.0 1.3896205555006038 0.0 17 6.320335458124776E-5 0.0 0.0 1.4952333610058688 0.0 18 6.320335458124776E-5 0.0 0.0 1.616457395092702 0.0 19 6.320335458124776E-5 0.0 0.0 1.6972312822475366 0.0 20 6.320335458124776E-5 0.0 0.0 1.777183525792815 0.0 21 6.320335458124776E-5 0.0 0.0 1.8749591153300054 0.0 22 6.320335458124776E-5 0.0 0.0 1.9994381221777726 0.0 23 6.320335458124776E-5 0.0 0.0 2.120914969682931 0.0 24 6.320335458124776E-5 0.0 0.0 2.2130654606623903 0.0 25 6.320335458124776E-5 0.0 0.0 2.2937129411080623 0.0 26 6.320335458124776E-5 0.0 0.0 2.3742656165218623 0.0 27 6.320335458124776E-5 0.0 0.0 2.4484347531229567 0.0 28 6.320335458124776E-5 0.0 0.0 2.5333800616801536 0.0 29 6.320335458124776E-5 0.0 0.0 2.632261709922516 0.0 30 6.320335458124776E-5 0.0 0.0 2.7511788215671333 0.0 31 6.320335458124776E-5 0.0 0.0 2.859856989769589 0.0 32 6.320335458124776E-5 0.0 0.0 2.9615511872908167 0.0 33 6.320335458124776E-5 0.0 0.0 3.0564194225172696 0.0 34 6.320335458124776E-5 0.0 0.0 3.160736559253619 0.0 35 6.320335458124776E-5 0.0 0.0 3.281802584953999 0.0 36 6.320335458124776E-5 0.0 0.0 3.396516673518964 0.0 37 6.320335458124776E-5 0.0 0.0 3.517645902573925 0.0 38 6.320335458124776E-5 0.0 0.0 3.6415560792304613 0.0 39 9.480503187187164E-5 0.0 0.0 3.7674887632335974 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTCG 45 3.8562575E-10 45.0 29 CGCGATC 20 7.035164E-4 45.0 12 CTCGACA 35 1.2128294E-7 45.0 44 CGTAAAC 40 6.8212103E-9 45.0 34 CCGCGAC 20 7.035164E-4 45.0 11 ACTCCCG 20 7.035164E-4 45.0 36 TATACGT 20 7.035164E-4 45.0 1 TATACGA 25 3.8923623E-5 45.0 17 TAAGCGT 25 3.8923623E-5 45.0 21 TGCGTTA 40 6.8212103E-9 45.0 30 TCCGCGA 30 2.1667129E-6 44.999996 30 CCGCGAA 30 2.1667129E-6 44.999996 31 ATACGCC 30 2.1667129E-6 44.999996 41 TATACGC 30 2.1667129E-6 44.999996 40 TGTCGCG 60 0.0 44.999996 1 CGGTCTA 285 0.0 44.210526 31 TGTTGCG 160 0.0 43.59375 1 CGACGGT 285 0.0 42.63158 28 CCGTACA 70 0.0 41.785713 42 TAAACGG 265 0.0 41.603775 2 >>END_MODULE