##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547509_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2789690 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.608561166294464 31.0 31.0 33.0 30.0 34.0 2 32.037122404281476 33.0 31.0 34.0 30.0 34.0 3 32.086806060888485 33.0 31.0 34.0 30.0 34.0 4 35.82507124447519 37.0 35.0 37.0 35.0 37.0 5 35.77819901135968 37.0 35.0 37.0 35.0 37.0 6 35.82891073918607 37.0 35.0 37.0 35.0 37.0 7 36.134421387322604 37.0 35.0 37.0 35.0 37.0 8 36.13838921170453 37.0 35.0 37.0 35.0 37.0 9 37.98236649950353 39.0 38.0 39.0 35.0 39.0 10 37.486204918826104 39.0 37.0 39.0 35.0 39.0 11 37.13933662880105 39.0 37.0 39.0 33.0 39.0 12 36.51748258767103 39.0 35.0 39.0 33.0 39.0 13 36.25222300685739 39.0 35.0 39.0 32.0 39.0 14 37.300322616491435 40.0 35.0 41.0 32.0 41.0 15 37.495211654341524 40.0 35.0 41.0 33.0 41.0 16 37.59195717086845 40.0 35.0 41.0 33.0 41.0 17 37.52174148382078 39.0 35.0 41.0 33.0 41.0 18 37.41127329559915 39.0 35.0 41.0 33.0 41.0 19 37.39594901225584 39.0 35.0 41.0 33.0 41.0 20 37.258473522147625 39.0 35.0 41.0 32.0 41.0 21 37.13358007520549 39.0 35.0 41.0 32.0 41.0 22 37.09111370797472 39.0 35.0 41.0 32.0 41.0 23 37.01981689721797 39.0 35.0 41.0 32.0 41.0 24 36.91225297434482 38.0 35.0 41.0 32.0 41.0 25 36.81516476741143 38.0 35.0 41.0 32.0 41.0 26 36.766472618821446 38.0 35.0 41.0 32.0 41.0 27 36.729320462130204 38.0 35.0 41.0 31.0 41.0 28 36.72266129928415 38.0 35.0 41.0 31.0 41.0 29 36.71449802666246 38.0 35.0 41.0 31.0 41.0 30 36.67446562162821 38.0 35.0 41.0 31.0 41.0 31 36.54014496234348 38.0 35.0 41.0 31.0 41.0 32 36.41247844742606 38.0 35.0 41.0 31.0 41.0 33 36.29858156282598 38.0 35.0 41.0 30.0 41.0 34 36.17595037441436 38.0 35.0 41.0 30.0 41.0 35 35.99610852818772 38.0 35.0 41.0 30.0 41.0 36 35.874016109316806 38.0 35.0 41.0 29.0 41.0 37 35.81861461309321 38.0 35.0 41.0 29.0 41.0 38 35.6898816714402 38.0 35.0 41.0 29.0 41.0 39 35.61601755033713 38.0 35.0 41.0 28.0 41.0 40 35.44452609429722 38.0 35.0 40.0 27.0 41.0 41 35.403921582684816 38.0 35.0 40.0 27.0 41.0 42 35.37344830429188 38.0 34.0 40.0 27.0 41.0 43 35.268642035494985 38.0 34.0 40.0 27.0 41.0 44 35.14037724621732 38.0 34.0 40.0 26.0 41.0 45 35.057163340729616 38.0 34.0 40.0 26.0 41.0 46 35.0178872921364 37.0 34.0 40.0 26.0 41.0 47 34.945275281482886 37.0 34.0 40.0 26.0 41.0 48 34.80046385082213 37.0 34.0 40.0 25.0 41.0 49 34.74702063670157 37.0 34.0 40.0 25.0 41.0 50 34.60939029067746 37.0 34.0 40.0 24.0 41.0 51 34.22499955192154 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 8.0 11 10.0 12 16.0 13 23.0 14 39.0 15 88.0 16 242.0 17 510.0 18 1089.0 19 2215.0 20 3840.0 21 6164.0 22 9436.0 23 13629.0 24 19372.0 25 27752.0 26 37162.0 27 44677.0 28 47936.0 29 52596.0 30 61011.0 31 73321.0 32 92125.0 33 121305.0 34 216916.0 35 349126.0 36 176130.0 37 232722.0 38 382637.0 39 817352.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.094824156089025 23.672917062469306 29.204391885836777 14.027866895604888 2 30.853320619853818 25.83523617319487 30.39402227487642 12.917420932074892 3 28.991429155210795 24.83655890080977 32.226089637199834 13.945922306779607 4 25.72027716341242 27.682753280830486 31.62182894873624 14.975140607020851 5 24.445404328079466 32.000831633622376 29.462305847603137 14.091458190695025 6 22.817983360158298 40.14955066691998 26.199398499474853 10.83306747344687 7 88.65010090726926 3.5420064594990843 6.313067043291548 1.4948255899401008 8 89.38971713702956 2.9719431191279315 6.151292795973746 1.4870469478687596 9 84.06396409636912 6.091752130165 7.364725112826156 2.4795586606397126 10 45.426624463650086 33.07632747724657 12.74783219640892 8.749215862694422 11 37.63081202570895 21.96950198767605 24.843656463621404 15.556029522993594 12 34.763611727467925 21.68344869860092 27.5952525190971 15.95768705483405 13 24.54301373987791 31.47231412809309 26.658840229559555 17.32583190246945 14 17.530048141549777 35.08543960081586 30.063447909982834 17.321064347651532 15 17.06852732740914 26.616971778226254 41.00236943889823 15.312131455466377 16 22.02506371675706 24.117769357885642 37.62955740602003 16.227609519337275 17 22.11116647369421 24.13540572608426 28.45183515014213 25.301592650079403 18 23.493936602274804 26.551874939509407 31.76514236348842 18.18904609472737 19 27.185637113801175 27.572382594481827 27.453193724033852 17.78878656768315 20 28.639992257204206 27.76631095211296 26.668841340794135 16.9248554498887 21 24.714179711724242 26.17599088070717 31.254189533604094 17.855639873964492 22 23.84996182371518 22.394029444131785 31.123852471063092 22.632156261089943 23 21.165613383565915 26.78760005592019 30.06498929988637 21.981797260627527 24 20.33372883725432 26.18556183661984 35.18416024719592 18.296549078929917 25 20.42764608253964 27.533202613910507 31.561535511114137 20.477615792435717 26 18.86073362990153 33.45844878821661 27.54266603099269 20.138151550889166 27 18.03160924690557 32.43851467367342 31.18826823052024 18.34160784890077 28 16.6057877398564 29.224179030644983 35.866780896802155 18.303252332696466 29 18.02300614046722 27.344758736633818 35.682100878592244 18.950134244306717 30 20.334194838853062 28.399965587574243 32.45070240779441 18.815137165778275 31 26.09591029827687 27.767135416479967 27.813592191247054 18.323362093996106 32 27.12491352085716 27.519652721270106 28.478182163609578 16.87725159426316 33 25.941843000476755 27.862092203793253 27.642067756632454 18.553997039097535 34 20.0172062128767 28.87923030874398 29.486215314246383 21.61734816413293 35 19.567084514766876 28.404410525900726 31.233757155813013 20.794747803519385 36 26.050994913413316 26.667264104613775 28.60260459047421 18.679136391498695 37 20.733844979191236 31.27175420924906 30.06065190039037 17.933748911169342 38 21.13915883126799 31.592040692693452 26.70637239263144 20.562428083407116 39 20.996634034605997 29.745527280808982 28.610885080421124 20.646953604163905 40 23.23182862611975 27.12477013574985 27.52689366918905 22.11650756894135 41 19.30483315350451 26.12383454792468 29.74696113188204 24.82437116668877 42 21.834289831486654 26.329699715739025 27.566324573698154 24.26968587907617 43 21.709795712068367 26.956292634665502 27.898404482218453 23.43550717104768 44 19.759937484093214 30.04090060185899 28.920668604755367 21.278493309292433 45 19.237477999347597 32.55870723987253 26.408955833802324 21.79485892697755 46 21.94623775401568 30.52486118529299 26.8991178231273 20.62978323756403 47 20.837763335711138 29.01616308622105 28.33827414515591 21.8077994329119 48 22.0820234506343 27.380067319307884 30.59960067247615 19.938308557581667 49 21.321078686162263 26.367983539389684 30.78653900612613 21.52439876832193 50 19.953077223634168 30.69215575924207 28.884356326330167 20.4704106907936 51 19.516469571887914 31.61519738752335 27.462083600686814 21.406249439901927 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1932.0 1 3524.5 2 5117.0 3 16237.0 4 27357.0 5 20033.5 6 12710.0 7 12091.0 8 11472.0 9 11561.0 10 11650.0 11 11520.0 12 11390.0 13 11125.0 14 10860.0 15 10067.5 16 9275.0 17 9943.0 18 10611.0 19 10831.5 20 11052.0 21 11921.5 22 12791.0 23 15476.0 24 18161.0 25 22801.5 26 30409.5 27 33377.0 28 41063.5 29 48750.0 30 57936.5 31 67123.0 32 74944.0 33 82765.0 34 90844.0 35 98923.0 36 105684.5 37 112446.0 38 125142.0 39 137838.0 40 162411.5 41 186985.0 42 208541.0 43 230097.0 44 235444.0 45 240791.0 46 237786.0 47 234781.0 48 219991.0 49 205201.0 50 192602.0 51 180003.0 52 164410.0 53 148817.0 54 143109.5 55 137402.0 56 127552.5 57 117703.0 58 105731.0 59 93759.0 60 89267.5 61 84776.0 62 71260.5 63 57745.0 64 50525.0 65 43305.0 66 33924.5 67 24544.0 68 20702.5 69 16861.0 70 13437.5 71 10014.0 72 8208.5 73 6403.0 74 5011.5 75 2573.0 76 1526.0 77 1336.0 78 1146.0 79 831.5 80 517.0 81 413.0 82 309.0 83 237.0 84 165.0 85 110.5 86 56.0 87 47.5 88 39.0 89 30.0 90 21.0 91 16.5 92 12.0 93 12.0 94 12.0 95 18.0 96 24.0 97 17.0 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2789690.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.071748364831457 #Duplication Level Percentage of deduplicated Percentage of total 1 80.83208102740713 13.799449471055613 2 8.881283764707769 3.03238083175508 3 2.999377282761415 1.5361384266748443 4 1.4071759614709118 0.9609181567708468 5 0.7921855554867587 0.6761996230762086 6 0.48157951604260485 0.4932842589321999 7 0.32392744163099063 0.38710054403915306 8 0.22412569472846067 0.306097396999785 9 0.17507036849392407 0.268988154935993 >10 1.4935245369583212 5.890648465051266 >50 0.6809167140256702 8.621292468997469 >100 1.6977837236620448 62.006318712653176 >500 0.008437240480038398 0.8841800030347886 >1k 0.0023202411320105594 0.5853002268195591 >5k 0.0 0.0 >10k+ 2.1093101200095996E-4 0.55170325920404 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15321 0.5492008072581541 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3782 0.13557061895766195 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0753883047937226E-4 0.0 0.0 0.020934225666651134 0.0 2 1.0753883047937226E-4 0.0 0.0 0.06481006850223502 0.0 3 1.0753883047937226E-4 0.0 0.0 0.09484924848280633 0.0 4 1.0753883047937226E-4 0.0 0.0 0.15858392868024762 0.0 5 1.0753883047937226E-4 0.0 0.0 0.2708903139775387 0.0 6 1.0753883047937226E-4 0.0 0.0 0.38602855514411993 0.0 7 1.0753883047937226E-4 0.0 0.0 0.4507310848158756 0.0 8 1.0753883047937226E-4 0.0 0.0 0.584688621316347 0.0 9 1.0753883047937226E-4 0.0 0.0 0.6273456907398313 0.0 10 1.0753883047937226E-4 0.0 0.0 0.707569658277443 0.0 11 1.0753883047937226E-4 0.0 0.0 0.8549337023110095 0.0 12 1.0753883047937226E-4 0.0 0.0 0.983263373349727 0.0 13 1.0753883047937226E-4 0.0 0.0 1.0293975316253778 0.0 14 1.0753883047937226E-4 0.0 0.0 1.0516580695346078 0.0 15 1.0753883047937226E-4 0.0 0.0 1.0845291053844692 0.0 16 1.0753883047937226E-4 0.0 0.0 1.1586233595847568 0.0 17 1.0753883047937226E-4 0.0 0.0 1.2427545712964523 0.0 18 1.0753883047937226E-4 0.0 0.0 1.3558854209607518 0.0 19 1.0753883047937226E-4 0.0 0.0 1.4254630442809058 0.0 20 1.0753883047937226E-4 0.0 0.0 1.5010986883847308 0.0 21 1.0753883047937226E-4 0.0 0.0 1.5892805293778163 0.0 22 1.0753883047937226E-4 0.0 0.0 1.6894350268309382 0.0 23 1.0753883047937226E-4 0.0 0.0 1.783854119991827 0.0 24 1.0753883047937226E-4 0.0 0.0 1.8635403933770418 0.0 25 1.0753883047937226E-4 0.0 0.0 1.9274901512354419 0.0 26 1.0753883047937226E-4 0.0 0.0 1.9991827048883568 0.0 27 1.0753883047937226E-4 0.0 0.0 2.083421455430532 0.0 28 1.0753883047937226E-4 0.0 0.0 2.1581250963368688 0.0 29 1.0753883047937226E-4 0.0 0.0 2.2575268219766356 0.0 30 1.0753883047937226E-4 0.0 0.0 2.3594019407174276 0.0 31 1.0753883047937226E-4 0.0 0.0 2.4529965695113076 0.0 32 1.0753883047937226E-4 0.0 0.0 2.5391710190021115 0.0 33 1.0753883047937226E-4 0.0 0.0 2.6231229993296745 0.0 34 1.0753883047937226E-4 0.0 0.0 2.7230265728450114 0.0 35 1.0753883047937226E-4 0.0 0.0 2.841964519355197 0.0 36 1.0753883047937226E-4 0.0 0.0 2.943301943943592 0.0 37 1.0753883047937226E-4 0.0 0.0 3.057615720743165 0.0 38 1.0753883047937226E-4 0.0 0.0 3.1929354157630416 0.0 39 1.0753883047937226E-4 0.0 0.0 3.4404898035265568 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTACG 30 2.16662E-6 45.000004 33 GATCGAC 40 6.8212103E-9 45.0 9 CGAAACG 20 7.035021E-4 45.0 13 CCGTAAA 20 7.035021E-4 45.0 34 CGCTAAA 35 1.2127566E-7 45.0 19 TCATCGT 35 1.2127566E-7 45.0 34 CGCTTAT 20 7.035021E-4 45.0 22 TATCCGT 20 7.035021E-4 45.0 25 CGTATCG 25 3.892244E-5 44.999996 10 CGTTACG 65 0.0 44.999996 25 CGTCGAA 25 3.892244E-5 44.999996 31 CGGTCGA 25 3.892244E-5 44.999996 37 ATACGCG 50 2.1827873E-11 44.999996 1 GTACGAT 25 3.892244E-5 44.999996 12 TATCGCG 170 0.0 42.352943 1 CGACGGT 510 0.0 41.911766 28 ACGGTCT 510 0.0 41.911766 30 CGTTTTT 7980 0.0 41.729324 1 TCGATAG 115 0.0 41.08696 1 CCTTACG 55 6.184564E-11 40.909092 33 >>END_MODULE