##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547508_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3864766 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.55044833244755 31.0 31.0 33.0 30.0 34.0 2 31.98004924489607 31.0 31.0 34.0 30.0 34.0 3 32.04004640901933 33.0 31.0 34.0 30.0 34.0 4 35.782080208737085 37.0 35.0 37.0 35.0 37.0 5 35.720567558294604 37.0 35.0 37.0 33.0 37.0 6 35.7690602742831 37.0 35.0 37.0 35.0 37.0 7 36.11027084175342 37.0 35.0 37.0 35.0 37.0 8 36.126310105191365 37.0 35.0 37.0 35.0 37.0 9 38.01990728546049 39.0 39.0 39.0 35.0 39.0 10 37.3527830662969 39.0 37.0 39.0 34.0 39.0 11 37.07280078535156 39.0 37.0 39.0 33.0 39.0 12 36.54623902197442 39.0 35.0 39.0 33.0 39.0 13 36.27654662662629 39.0 35.0 39.0 32.0 39.0 14 37.2546045478562 40.0 35.0 41.0 32.0 41.0 15 37.46655761306118 40.0 35.0 41.0 32.0 41.0 16 37.580751331387205 40.0 35.0 41.0 33.0 41.0 17 37.525696510474376 39.0 35.0 41.0 33.0 41.0 18 37.427900680144674 39.0 35.0 41.0 32.0 41.0 19 37.40063020633073 39.0 35.0 41.0 32.0 41.0 20 37.25972387461492 39.0 35.0 41.0 32.0 41.0 21 37.14939559083267 39.0 35.0 41.0 32.0 41.0 22 37.10707220049027 39.0 35.0 41.0 32.0 41.0 23 37.03331301300001 39.0 35.0 41.0 32.0 41.0 24 36.92017783224133 39.0 35.0 41.0 32.0 41.0 25 36.84062036356147 38.0 35.0 41.0 31.0 41.0 26 36.82027889916233 38.0 35.0 41.0 31.0 41.0 27 36.80263902135343 38.0 35.0 41.0 31.0 41.0 28 36.80189382746588 38.0 35.0 41.0 31.0 41.0 29 36.76203112943966 38.0 35.0 41.0 31.0 41.0 30 36.719064750621385 38.0 35.0 41.0 31.0 41.0 31 36.61372383218027 38.0 35.0 41.0 31.0 41.0 32 36.526005196692374 38.0 35.0 41.0 31.0 41.0 33 36.44561869981261 38.0 35.0 41.0 30.0 41.0 34 36.32281048839697 38.0 35.0 41.0 30.0 41.0 35 36.1637237545559 38.0 35.0 41.0 30.0 41.0 36 36.04723183758085 38.0 35.0 41.0 30.0 41.0 37 35.98607755294887 38.0 35.0 41.0 29.0 41.0 38 35.82734452745651 38.0 35.0 41.0 29.0 41.0 39 35.76570923052004 38.0 35.0 41.0 29.0 41.0 40 35.62766956654038 38.0 35.0 40.0 28.0 41.0 41 35.566611277370995 38.0 35.0 40.0 27.0 41.0 42 35.543346996946255 38.0 35.0 40.0 27.0 41.0 43 35.46860818999132 38.0 35.0 40.0 27.0 41.0 44 35.34109490716902 38.0 34.0 40.0 27.0 41.0 45 35.257855973686375 38.0 34.0 40.0 27.0 41.0 46 35.249347308478704 38.0 34.0 40.0 27.0 41.0 47 35.14654004925524 38.0 34.0 40.0 26.0 41.0 48 35.012909449110246 37.0 34.0 40.0 26.0 41.0 49 34.931028941985105 37.0 34.0 40.0 26.0 41.0 50 34.82147276186967 37.0 34.0 40.0 26.0 41.0 51 34.46873730518225 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 4.0 11 8.0 12 12.0 13 19.0 14 30.0 15 104.0 16 258.0 17 706.0 18 1563.0 19 3017.0 20 4964.0 21 7832.0 22 11819.0 23 17214.0 24 24689.0 25 35799.0 26 48621.0 27 58850.0 28 65093.0 29 73156.0 30 85834.0 31 104703.0 32 130147.0 33 169593.0 34 291127.0 35 453686.0 36 249411.0 37 336170.0 38 545741.0 39 1144289.0 40 301.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.82968024454779 24.52922117406332 30.8881831396778 13.752915441711089 2 28.862471880574397 25.80132923959691 32.15382250827087 13.182376371557813 3 28.291441189453643 25.512049112417156 32.727181930290214 13.469327767838985 4 25.455409202006017 26.968722039057475 32.91733574555355 14.658533013382957 5 23.417355669140125 31.92659012214452 31.01763470285135 13.638419505864002 6 21.654868625940097 40.887572494686616 26.632220424211972 10.825338455161322 7 89.71174451441563 3.4097795312833945 5.4509639134685 1.427512040832485 8 91.40589624313607 2.1562236885751944 4.944827190054974 1.4930528782337664 9 87.90345909687676 3.767472597306021 6.278879497490922 2.0501888083262996 10 41.918527538277864 26.172658318770143 17.648183615773892 14.260630527178101 11 34.9921056022538 26.202077952455593 22.94213931710225 15.863677128188355 12 33.473980054678606 22.705255635140652 26.637550630490953 17.183213679689793 13 24.93330773454331 28.86449011401984 26.835880878687092 19.366321272749758 14 17.77810092512716 32.87231361484758 31.140255322055722 18.20933013796954 15 17.26927322378638 26.93166934298221 38.87371188837824 16.92534554485317 16 22.325129128128328 24.742558799161447 36.18012060756072 16.752191465149508 17 22.816801845182866 24.470666529357793 28.24313296070189 24.469398664757453 18 24.076283014288574 26.2865591344987 31.105246734213665 18.531911116999066 19 26.87971276915601 26.992940840402756 26.72203181253406 19.405314577907173 20 27.67000641177241 28.395121464016192 26.696855644041577 17.238016480169822 21 24.85345813950961 26.50201849219332 30.84662823053194 17.79789513776513 22 24.63905964811324 22.208951331076708 31.421980011208955 21.730009009601098 23 20.96856575533939 25.710249986674484 31.475514947088644 21.845669310897478 24 21.05097695436153 26.049882450839196 34.37157644214424 18.52756415265504 25 20.16585221459721 27.672102269581135 31.737341924452867 20.424703591368793 26 19.554508604143177 32.1321911857018 27.614608491173854 20.698691718981173 27 18.933177325612988 31.682978995364792 30.669670557027256 18.714173121994968 28 17.371012889266776 29.363226648133416 34.53789957787871 18.727860884721093 29 18.038815286617613 27.896126182024993 34.07869971946555 19.986358811891847 30 21.10932460076496 28.33447096150194 31.299437016367875 19.256767421365225 31 25.26836036127414 26.83256890585355 28.51988969060481 19.3791810422675 32 25.95934656845977 27.92616681061674 28.316953730187027 17.797532890736463 33 25.042059467507215 27.469787304069637 27.193004699378953 20.29514852904419 34 20.656826312382172 28.32650152687123 30.29179515655023 20.724877004196372 35 20.666788105670562 27.90013677412811 29.855028739126766 21.578046381074557 36 25.761378567292304 26.481292787195915 28.443481442343472 19.313847203168315 37 21.25926899584606 29.770418183144855 29.87994615974163 19.09036666126746 38 21.37089283025156 30.20661535523755 26.70125435796113 21.721237456549762 39 20.35512628707663 29.175039316740005 29.253181175781407 21.21665322040196 40 22.868085674527254 27.399175008266997 28.02205877406291 21.710680543142846 41 20.382243064651263 25.95111838595144 28.465578511092264 25.201060038305034 42 21.370168336194222 26.6963640230741 28.72688799270124 23.206579648030438 43 21.73479584533708 26.058291756861863 29.69882264540725 22.508089752393808 44 21.09568858761436 28.65596519944545 28.91727468105443 21.331071531885758 45 19.238862068233885 31.565740332014926 26.794274219965708 22.401123379785478 46 22.63161598916985 28.755686631480405 27.600739604933388 21.011957774416356 47 20.860253893767435 29.04359539490877 28.139970181894586 21.956180529429208 48 21.080991708165513 27.65577527850328 30.086737463535957 21.176495549795252 49 22.287791809387684 25.07784429898214 30.82328917197057 21.81107471965961 50 20.58543777294667 29.119305023900544 28.764277061017406 21.530980142135384 51 19.661397352388217 31.1082223348063 27.110386502054716 22.119993810750767 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2710.0 1 4657.0 2 6604.0 3 20398.5 4 34193.0 5 24449.5 6 14706.0 7 14119.5 8 13533.0 9 13934.5 10 14336.0 11 14160.5 12 13985.0 13 13373.0 14 12761.0 15 12130.5 16 11500.0 17 11181.5 18 10863.0 19 12105.0 20 13347.0 21 16219.5 22 19092.0 23 21108.0 24 23124.0 25 27665.0 26 38947.5 27 45689.0 28 51191.0 29 56693.0 30 67969.0 31 79245.0 32 90815.0 33 102385.0 34 113311.5 35 124238.0 36 139006.5 37 153775.0 38 169506.0 39 185237.0 40 220235.0 41 255233.0 42 287464.0 43 319695.0 44 331187.5 45 342680.0 46 332914.0 47 323148.0 48 315117.0 49 307086.0 50 286119.0 51 265152.0 52 248983.5 53 232815.0 54 222623.5 55 212432.0 56 199864.0 57 187296.0 58 167827.5 59 148359.0 60 129277.0 61 110195.0 62 93350.0 63 76505.0 64 62359.5 65 48214.0 66 37012.0 67 25810.0 68 21093.5 69 16377.0 70 13570.5 71 10764.0 72 8346.5 73 5929.0 74 4740.5 75 2567.5 76 1583.0 77 1097.5 78 612.0 79 540.5 80 469.0 81 425.5 82 382.0 83 268.5 84 155.0 85 102.0 86 49.0 87 38.0 88 27.0 89 21.0 90 15.0 91 10.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3864766.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.597969653119534 #Duplication Level Percentage of deduplicated Percentage of total 1 80.42081124149317 12.544013732240646 2 9.25540984872923 2.887312038953244 3 2.8513746985274975 1.334269680519143 4 1.3659863757199562 0.8522645614021847 5 0.7691641180393796 0.5998699285723348 6 0.5034579722289235 0.47117533034687087 7 0.3451072696753645 0.3768080903627092 8 0.2643096842862436 0.3298155547617946 9 0.21650872193554788 0.3039386826947734 >10 1.6861449266191146 5.7379372422503145 >50 0.5460230522434109 6.2852902372921164 >100 1.7389450078262148 63.965402280986325 >500 0.03425091794808864 3.1464932610452925 >1k 0.0021720094308544016 0.4782142287797536 >5k 1.6707764852726166E-4 0.15117824202459676 >10k+ 1.6707764852726166E-4 0.536016907767955 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20568 0.532192634689914 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5801 0.15009964380767168 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.762436328616015E-5 0.0 0.0 0.02517616849247794 0.0 2 7.762436328616015E-5 0.0 0.0 0.0955814659930252 0.0 3 7.762436328616015E-5 0.0 0.0 0.13736924822874141 0.0 4 7.762436328616015E-5 0.0 0.0 0.24640560385803437 0.0 5 7.762436328616015E-5 0.0 0.0 0.4575179972086279 0.0 6 7.762436328616015E-5 0.0 0.0 0.6677247729875496 0.0 7 7.762436328616015E-5 0.0 0.0 0.7859208034846095 0.0 8 7.762436328616015E-5 0.0 0.0 1.0390021025852536 0.0 9 7.762436328616015E-5 0.0 0.0 1.1088640295427976 0.0 10 7.762436328616015E-5 0.0 0.0 1.2613959034001023 0.0 11 7.762436328616015E-5 0.0 0.0 1.4932857513236248 0.0 12 7.762436328616015E-5 0.0 0.0 1.642686775861721 0.0 13 7.762436328616015E-5 0.0 0.0 1.7021470381389197 0.0 14 1.0349915104821352E-4 0.0 0.0 1.7277113284478285 0.0 15 1.0349915104821352E-4 0.0 0.0 1.7724488364884188 0.0 16 1.0349915104821352E-4 0.0 0.0 1.875430491781391 0.0 17 1.0349915104821352E-4 0.0 0.0 2.005166677620327 0.0 18 1.0349915104821352E-4 0.0 0.0 2.1601049067395026 0.0 19 1.0349915104821352E-4 0.0 0.0 2.249217675792014 0.0 20 1.0349915104821352E-4 0.0 0.0 2.348473361647251 0.0 21 1.0349915104821352E-4 0.0 0.0 2.495985526678717 0.0 22 1.2937393881026692E-4 0.0 0.0 2.6458005478210067 0.0 23 1.2937393881026692E-4 0.0 0.0 2.7985394199804077 0.0 24 1.2937393881026692E-4 0.0 0.0 2.9105513762023367 0.0 25 1.2937393881026692E-4 0.0 0.0 3.0114112988988206 0.0 26 1.2937393881026692E-4 0.0 0.0 3.110304737725389 0.0 27 1.2937393881026692E-4 0.0 0.0 3.2259909138095293 0.0 28 1.2937393881026692E-4 0.0 0.0 3.3418582134080044 0.0 29 1.2937393881026692E-4 0.0 0.0 3.4964341954985114 0.0 30 1.2937393881026692E-4 0.0 0.0 3.663973446257807 0.0 31 1.552487265723203E-4 0.0 0.0 3.8066470259777696 0.0 32 1.552487265723203E-4 0.0 0.0 3.9365384605432774 0.0 33 1.552487265723203E-4 0.0 0.0 4.071941224902103 0.0 34 1.8112351433437367E-4 0.0 0.0 4.218107900969942 0.0 35 1.8112351433437367E-4 0.0 0.0 4.385233155125045 0.0 36 1.8112351433437367E-4 0.0 0.0 4.524827635101323 0.0 37 1.8112351433437367E-4 0.0 0.0 4.6785238744079205 0.0 38 1.8112351433437367E-4 0.0 0.0 4.870928796206549 0.0 39 1.8112351433437367E-4 0.0 0.0 5.239178775636093 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 100 0.0 45.000004 1 GACGCGT 25 3.8925224E-5 45.000004 10 CGTATCG 35 1.2129203E-7 45.0 41 TGCGCGA 20 7.0353586E-4 45.0 11 CCGACTA 35 1.2129203E-7 45.0 10 CTATTCG 95 0.0 45.0 1 CCCGGTA 45 3.8562575E-10 45.0 21 GTACGAT 45 3.8562575E-10 45.0 9 TAGTACG 110 0.0 42.954544 1 GCGATAC 190 0.0 42.63158 9 AATCGCG 155 0.0 42.09677 1 AATGCGG 810 0.0 41.944443 2 CGTTTTT 9490 0.0 41.799263 1 AACGTAC 70 0.0 41.785713 26 CGCATTA 70 0.0 41.785713 20 ATAGCCG 65 0.0 41.53846 27 CGGTACG 65 0.0 41.53846 2 GTACGTC 65 0.0 41.53846 22 TACGGGC 680 0.0 41.029415 4 CGCCTAA 55 6.184564E-11 40.909092 45 >>END_MODULE