SRR1547507_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547507_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3048548
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15926	0.5224126370980545	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG	3140	0.10299985435689384	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGCGC	55	1.8189894E-12	45.0	35
CGCGAAA	20	7.035124E-4	45.0	19
CCCGTAG	40	6.8212103E-9	45.0	37
CCCGTAA	20	7.035124E-4	45.0	18
CGTAGCA	35	1.2128112E-7	45.0	39
CGCTAAT	25	3.8923285E-5	45.0	39
CTATTCG	45	3.8562575E-10	45.0	43
TTACGTC	25	3.8923285E-5	45.0	32
GACGATT	50	2.1827873E-11	45.0	30
TAGTACG	40	6.8212103E-9	45.0	43
CCCGGTA	30	2.1666874E-6	44.999996	19
GCGTATC	30	2.1666874E-6	44.999996	30
CGCTTAT	30	2.1666874E-6	44.999996	23
CGGTCTA	380	0.0	43.223686	31
TTACGAT	65	0.0	41.538464	13
CCGCGTA	55	6.184564E-11	40.909092	42
TAGCACG	50	1.0822987E-9	40.5	1
CGTTTTT	8495	0.0	40.44438	1
ATATCGG	95	0.0	40.26316	2
TACGGGA	1415	0.0	40.229683	4