##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547506_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3505579 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.597857871695375 31.0 31.0 33.0 30.0 34.0 2 32.023333378024 31.0 31.0 34.0 30.0 34.0 3 32.07732759695331 33.0 31.0 34.0 30.0 34.0 4 35.80927858136987 37.0 35.0 37.0 35.0 37.0 5 35.7429078049589 37.0 35.0 37.0 35.0 37.0 6 35.795553601844375 37.0 35.0 37.0 35.0 37.0 7 36.12196929522912 37.0 35.0 37.0 35.0 37.0 8 36.12795803489238 37.0 35.0 37.0 35.0 37.0 9 37.98993261883415 39.0 39.0 39.0 35.0 39.0 10 37.482085270364756 39.0 37.0 39.0 35.0 39.0 11 37.139976876858285 39.0 37.0 39.0 33.0 39.0 12 36.47094559843039 38.0 35.0 39.0 33.0 39.0 13 36.18202214241927 38.0 35.0 39.0 32.0 39.0 14 37.21713531487951 39.0 35.0 41.0 32.0 41.0 15 37.42560786677465 39.0 35.0 41.0 33.0 41.0 16 37.534490878682234 39.0 35.0 41.0 33.0 41.0 17 37.481433166960436 39.0 35.0 41.0 33.0 41.0 18 37.37002731931016 39.0 35.0 41.0 33.0 41.0 19 37.33470904521051 39.0 35.0 41.0 32.0 41.0 20 37.18399499768797 39.0 35.0 41.0 32.0 41.0 21 37.040276370893366 39.0 35.0 41.0 32.0 41.0 22 36.97420939593716 39.0 35.0 41.0 32.0 41.0 23 36.92870649898348 38.0 35.0 41.0 32.0 41.0 24 36.82914691125204 38.0 35.0 41.0 32.0 41.0 25 36.73177041510119 38.0 35.0 41.0 31.0 41.0 26 36.694799632243345 38.0 35.0 41.0 31.0 41.0 27 36.64114943636986 38.0 35.0 41.0 31.0 41.0 28 36.640293657624035 38.0 35.0 41.0 31.0 41.0 29 36.6243231146695 38.0 35.0 41.0 31.0 41.0 30 36.58435625042254 38.0 35.0 41.0 31.0 41.0 31 36.512215813707236 38.0 35.0 41.0 31.0 41.0 32 36.36364891505797 38.0 35.0 41.0 31.0 41.0 33 36.27545521010937 38.0 35.0 41.0 30.0 41.0 34 36.14323482654363 38.0 35.0 41.0 30.0 41.0 35 35.97887624269771 38.0 35.0 41.0 30.0 41.0 36 35.83685148730067 38.0 35.0 41.0 29.0 41.0 37 35.775911768070266 38.0 35.0 41.0 29.0 41.0 38 35.65451755615834 38.0 35.0 41.0 29.0 41.0 39 35.59649832452784 38.0 35.0 40.0 29.0 41.0 40 35.410273452687846 38.0 35.0 40.0 27.0 41.0 41 35.374603738783236 38.0 34.0 40.0 27.0 41.0 42 35.33990676005305 38.0 34.0 40.0 27.0 41.0 43 35.24858518378847 38.0 34.0 40.0 27.0 41.0 44 35.11263303437178 37.0 34.0 40.0 27.0 41.0 45 35.01128715113823 37.0 34.0 40.0 26.0 41.0 46 34.96301067526934 37.0 34.0 40.0 26.0 41.0 47 34.90440323838088 37.0 34.0 40.0 26.0 41.0 48 34.79632037960063 37.0 34.0 40.0 26.0 41.0 49 34.69627385376282 36.0 34.0 40.0 26.0 41.0 50 34.58074885774932 36.0 34.0 40.0 25.0 41.0 51 34.209051914106055 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 10.0 12 15.0 13 29.0 14 59.0 15 117.0 16 314.0 17 681.0 18 1401.0 19 2753.0 20 4721.0 21 7340.0 22 11148.0 23 16013.0 24 23324.0 25 33464.0 26 45453.0 27 54487.0 28 59567.0 29 66166.0 30 77809.0 31 94454.0 32 119030.0 33 156148.0 34 280006.0 35 471156.0 36 227450.0 37 296226.0 38 474280.0 39 981638.0 40 312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.52198852172494 23.934876378481274 29.887074289297143 13.65606081049664 2 29.51084542667559 26.413896249378492 30.88867773340723 13.186580590538682 3 29.38384786079561 25.919826653457246 31.51644849538407 13.179876990363077 4 26.15479497110178 27.945540522692543 31.04434388727226 14.85532061893342 5 23.919272679349117 31.87131141531827 30.212726628040613 13.996689277291996 6 22.793838050718584 40.934521800820924 26.18968221797312 10.081957930487375 7 88.57549637306704 3.8227636575869495 5.941842987991428 1.659896981354578 8 89.22848408208743 3.0566990502852738 5.759362433423979 1.9554544342033087 9 85.02686717372508 5.6878478562314525 6.881430998987614 2.403853971055851 10 45.940770411963335 32.40243623093361 12.254837218045864 9.4019561390572 11 38.73785186412858 21.46683900148877 24.026016814911316 15.769292319471335 12 35.74348203249734 21.634657213544468 26.34503458629801 16.27682616766018 13 24.196174155538927 32.63634908812495 25.761992526769472 17.405484229566643 14 17.13671265146214 36.3557346732166 29.053773998532055 17.4537786767892 15 15.768636222432871 26.682810457273966 41.14307508117774 16.40547823911542 16 19.848704022930306 23.97618196594628 38.584439260960885 17.590674750162528 17 20.318269820762847 24.235368822097577 27.674372764099743 27.771988593039836 18 22.77957507162155 25.693416123270936 31.94895907352252 19.578049731584997 19 27.342587344344544 26.867573088496936 26.632576244894214 19.157263322264313 20 29.257791651536024 26.667720225389303 26.596690589486073 17.4777975335886 21 24.51383922598806 25.93514509300746 30.749299901671023 18.801715779333456 22 24.542365184182128 22.75159110663317 28.962405354436456 23.743638354748246 23 20.06005284719015 27.420320580423375 29.39354668658159 23.126079885804884 24 20.45331170685356 25.31125386134502 35.80170351317143 18.43373091862999 25 19.651874911391243 27.43001940620936 32.102400202648404 20.81570547975099 26 19.36684353711612 33.4179318166842 27.118088053357237 20.09713659284244 27 19.072084811096826 31.57897739574547 30.902997764420657 18.445940028737052 28 17.317396070663364 28.577076711150994 36.06685229458529 18.038674923600354 29 17.19553317725831 26.086646456976155 35.91361084716676 20.804209518598782 30 19.48970483905797 28.75168410125688 32.29010100756537 19.46851005211978 31 26.16041458486601 26.911331908366638 27.908941718329555 19.0193117884378 32 26.611695243496154 26.979280740784905 28.735338727211683 17.67368528850726 33 25.560599261919357 27.38760130637478 26.586677978159955 20.465121453545905 34 20.09217307611667 28.470532257296156 28.947800063841093 22.48949460274608 35 20.57876887099107 28.22951643651448 29.952341681645173 21.239373010849278 36 26.194018163618622 25.835332765286417 27.845129149849424 20.125519921245534 37 20.356466078784702 30.614143911747533 29.57751059097513 19.451879418492638 38 21.02708282996903 31.673312739493248 26.06550872195435 21.234095708583375 39 20.83869740205541 30.109034770005184 27.90854235491484 21.14372547302457 40 23.979947392427896 26.438143313843447 27.346409822742544 22.235499470986106 41 19.53643035857985 25.64007258144803 29.19429286859603 25.629204191376086 42 21.66295496407298 25.64669060374905 27.891654987663948 24.798699444514018 43 21.988065309610764 27.0153660779004 26.996995360823416 23.999573251665417 44 19.755281509844735 30.201230666888407 28.631304557677918 21.41218326558894 45 19.24957332298031 33.7771021563057 25.442815580536056 21.530508940177928 46 22.16983271522336 30.392839528077957 26.596291226071354 20.84103653062732 47 21.338129878117137 27.789703213078354 27.99292213925289 22.879244769551622 48 21.97303212964249 26.344264385426776 30.90622119769659 20.77648228723415 49 22.513285251879932 24.971709380961034 30.69803875479628 21.81696661236275 50 20.048186048581417 30.472911892728703 29.331103364094773 20.1477986945951 51 19.61327928995467 31.27560383035156 27.251589537705467 21.8595273419883 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2491.0 1 4222.0 2 5953.0 3 17591.0 4 29229.0 5 21392.0 6 13555.0 7 13497.0 8 13439.0 9 13896.5 10 14354.0 11 14210.0 12 14066.0 13 13488.5 14 12911.0 15 12366.5 16 11822.0 17 11759.5 18 11697.0 19 11638.5 20 11580.0 21 12628.5 22 13677.0 23 16618.0 24 19559.0 25 23978.5 26 33849.0 27 39300.0 28 45855.0 29 52410.0 30 64756.0 31 77102.0 32 89242.0 33 101382.0 34 111189.0 35 120996.0 36 123802.5 37 126609.0 38 144764.5 39 162920.0 40 208270.5 41 253621.0 42 278829.0 43 304037.0 44 304447.0 45 304857.0 46 304191.0 47 303525.0 48 280667.0 49 257809.0 50 242960.0 51 228111.0 52 209778.5 53 191446.0 54 182417.5 55 173389.0 56 159419.5 57 145450.0 58 135572.5 59 125695.0 60 116801.5 61 107908.0 62 92383.5 63 76859.0 64 64981.5 65 53104.0 66 44002.0 67 34900.0 68 29462.5 69 24025.0 70 19602.5 71 15180.0 72 12419.5 73 9659.0 74 7828.5 75 4565.5 76 3133.0 77 2298.5 78 1464.0 79 1145.5 80 827.0 81 625.0 82 423.0 83 342.5 84 262.0 85 238.0 86 214.0 87 146.5 88 79.0 89 58.0 90 37.0 91 64.0 92 91.0 93 54.0 94 17.0 95 12.5 96 8.0 97 4.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3505579.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.740934878545303 #Duplication Level Percentage of deduplicated Percentage of total 1 81.21554974718997 11.971931299485838 2 9.11198141122345 2.686382491947204 3 2.8930926462171063 1.27940670886454 4 1.2060545703094072 0.7111348752361164 5 0.7080941121303173 0.521898459739718 6 0.4345866404167697 0.3843728019281632 7 0.30863500251088105 0.3184697931276795 8 0.23384923952477848 0.27577251289856813 9 0.18070425814785154 0.23973747314699873 >10 1.4661963563551756 4.712118309505278 >50 0.4754834607685383 5.154334337040418 >100 1.638393861956317 60.07672055647022 >500 0.12406762629952228 10.436920568123368 >1k 0.002921529661684198 0.5693048469006334 >5k 1.947686441122799E-4 0.19195986718329894 >10k+ 1.947686441122799E-4 0.46953509840198493 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16354 0.4665135203057755 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6686 0.1907245564855335 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.7051916388134456E-5 0.0 0.0 0.024732005754256287 0.0 2 5.7051916388134456E-5 0.0 0.0 0.08614839374608303 0.0 3 5.7051916388134456E-5 0.0 0.0 0.12685493608901696 0.0 4 5.7051916388134456E-5 0.0 0.0 0.23648019342881732 0.0 5 5.7051916388134456E-5 0.0 0.0 0.415822892594918 0.0 6 5.7051916388134456E-5 0.0 0.0 0.6001005825285923 0.0 7 5.7051916388134456E-5 0.0 0.0 0.6915262785405778 0.0 8 5.7051916388134456E-5 0.0 0.0 0.901677012556271 0.0 9 5.7051916388134456E-5 0.0 0.0 0.958557773195241 0.0 10 8.557787458220169E-5 0.0 0.0 1.0763414545785446 0.0 11 8.557787458220169E-5 0.0 0.0 1.250463903395131 0.0 12 8.557787458220169E-5 0.0 0.0 1.3847926405309936 0.0 13 8.557787458220169E-5 0.0 0.0 1.439248694723468 0.0 14 8.557787458220169E-5 0.0 0.0 1.460899896992765 0.0 15 8.557787458220169E-5 0.0 0.0 1.5010359201718175 0.0 16 8.557787458220169E-5 0.0 0.0 1.5874125215834531 0.0 17 1.1410383277626891E-4 0.0 0.0 1.7014022505269457 0.0 18 1.1410383277626891E-4 0.0 0.0 1.844916346201298 0.0 19 1.1410383277626891E-4 0.0 0.0 1.920938024788487 0.0 20 1.1410383277626891E-4 0.0 0.0 1.9979010599960805 0.0 21 1.1410383277626891E-4 0.0 0.0 2.1077259990432395 0.0 22 1.1410383277626891E-4 5.7051916388134456E-5 0.0 2.221601624153956 0.0 23 1.1410383277626891E-4 5.7051916388134456E-5 0.0 2.335733982888419 0.0 24 1.1410383277626891E-4 5.7051916388134456E-5 0.0 2.427530516356927 0.0 25 1.1410383277626891E-4 5.7051916388134456E-5 0.0 2.5071464656765685 0.0 26 1.1410383277626891E-4 5.7051916388134456E-5 0.0 2.5892726993172883 0.0 27 1.4262979097033615E-4 5.7051916388134456E-5 0.0 2.6771611765132093 0.0 28 1.4262979097033615E-4 5.7051916388134456E-5 0.0 2.763052836635546 0.0 29 1.4262979097033615E-4 5.7051916388134456E-5 0.0 2.867999836831519 0.0 30 1.4262979097033615E-4 5.7051916388134456E-5 0.0 2.98295944835361 0.0 31 1.4262979097033615E-4 5.7051916388134456E-5 0.0 3.0931552248572918 0.0 32 1.4262979097033615E-4 5.7051916388134456E-5 0.0 3.1873194128559077 0.0 33 1.4262979097033615E-4 5.7051916388134456E-5 0.0 3.283337788137138 0.0 34 1.996817073584706E-4 5.7051916388134456E-5 0.0 3.3998378014017083 0.0 35 1.996817073584706E-4 5.7051916388134456E-5 0.0 3.5308290014288652 0.0 36 2.2820766555253782E-4 5.7051916388134456E-5 0.0 3.6412529855980993 0.0 37 2.2820766555253782E-4 5.7051916388134456E-5 0.0 3.759749815936255 0.0 38 2.567336237466051E-4 5.7051916388134456E-5 0.0 3.889542925719261 0.0 39 2.567336237466051E-4 5.7051916388134456E-5 0.0 4.080552741786735 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 155 0.0 45.000004 1 ATATCGT 35 1.212884E-7 45.000004 37 CTCGACC 35 1.212884E-7 45.000004 22 GCGTAAT 25 3.892449E-5 45.0 39 ATCGATC 50 2.1827873E-11 45.0 40 AATGCGT 65 0.0 44.999996 41 GGCGATA 875 0.0 44.22857 8 CACCGTA 160 0.0 43.59375 38 TTACGAG 200 0.0 42.75 1 GCGATAC 195 0.0 42.692307 9 TACGGGA 1350 0.0 42.166668 4 TAAGTCG 75 0.0 42.0 32 CGTAAGT 75 0.0 42.0 24 CGTTTTT 9515 0.0 41.94955 1 TACCCGC 65 0.0 41.53846 40 CTATCGA 60 3.6379788E-12 41.250004 12 CGTTCTA 60 3.6379788E-12 41.250004 28 ACGCGAA 55 6.184564E-11 40.909092 27 TCGAAAG 110 0.0 40.909092 1 GACCGAT 1085 0.0 40.64516 9 >>END_MODULE