SRR1547505_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547505_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3112756
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21060	0.6765708587502522	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4774	0.15336891166541805	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAAACG	35	1.2128294E-7	45.000004	37
TAGCGAT	35	1.2128294E-7	45.000004	15
CGTTACC	30	2.166702E-6	45.000004	17
TCGTCTA	55	1.8189894E-12	45.000004	10
TACCTCG	70	0.0	45.000004	34
ATACCCG	65	0.0	45.000004	32
GCGTACA	30	2.166702E-6	45.000004	36
TACGTCC	75	0.0	45.000004	28
ACGCGAG	20	7.0351455E-4	45.0	1
CTCCGTA	45	3.8562575E-10	45.0	45
TCCGATT	40	6.8212103E-9	45.0	43
GCGCGAT	50	2.1827873E-11	45.0	9
CGCGACA	40	6.8212103E-9	45.0	29
ATATCCG	40	6.8212103E-9	45.0	15
TCGCTAA	40	6.8212103E-9	45.0	26
GCGATCG	20	7.0351455E-4	45.0	9
ATGCGTA	25	3.8923474E-5	45.0	44
GTACGTA	50	2.1827873E-11	45.0	14
GTTAGCG	440	0.0	44.48864	1
TACGGAC	85	0.0	42.35294	30