##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547505_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3112756 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.559546267037955 31.0 31.0 33.0 30.0 34.0 2 31.988765582654086 31.0 31.0 34.0 30.0 34.0 3 32.01077116227549 33.0 31.0 34.0 30.0 34.0 4 35.76199323043631 37.0 35.0 37.0 35.0 37.0 5 35.69651010230162 37.0 35.0 37.0 33.0 37.0 6 35.74951297178449 37.0 35.0 37.0 33.0 37.0 7 36.11032024353981 37.0 35.0 37.0 35.0 37.0 8 36.12405758755264 37.0 35.0 37.0 35.0 37.0 9 37.99876219016203 39.0 39.0 39.0 35.0 39.0 10 37.39201530733536 39.0 37.0 39.0 35.0 39.0 11 37.065668494414595 39.0 37.0 39.0 33.0 39.0 12 36.39375717210086 38.0 35.0 39.0 33.0 39.0 13 36.0694966132906 38.0 35.0 39.0 32.0 39.0 14 37.01653711373458 39.0 35.0 41.0 32.0 41.0 15 37.27997183203566 39.0 35.0 41.0 32.0 41.0 16 37.4158318223465 39.0 35.0 41.0 33.0 41.0 17 37.365924280605356 39.0 35.0 41.0 33.0 41.0 18 37.258518174890675 39.0 35.0 41.0 32.0 41.0 19 37.2227485867829 39.0 35.0 41.0 32.0 41.0 20 37.066390041493776 39.0 35.0 41.0 32.0 41.0 21 36.92783436928561 38.0 35.0 41.0 32.0 41.0 22 36.89224436480084 38.0 35.0 41.0 32.0 41.0 23 36.84949446728237 38.0 35.0 41.0 32.0 41.0 24 36.70932736134795 38.0 35.0 41.0 32.0 41.0 25 36.591918865468415 38.0 35.0 41.0 31.0 41.0 26 36.513459776481035 38.0 35.0 40.0 31.0 41.0 27 36.49351603530762 38.0 35.0 40.0 31.0 41.0 28 36.50538204729185 38.0 35.0 40.0 31.0 41.0 29 36.5063898358882 38.0 35.0 40.0 31.0 41.0 30 36.4492584706286 38.0 35.0 40.0 31.0 41.0 31 36.320674990265864 38.0 35.0 41.0 31.0 41.0 32 36.18062032488252 38.0 35.0 41.0 30.0 41.0 33 36.07906401915216 38.0 35.0 41.0 30.0 41.0 34 35.943017698785255 38.0 35.0 41.0 30.0 41.0 35 35.74541628062077 38.0 35.0 41.0 29.0 41.0 36 35.59023129342615 38.0 35.0 40.0 29.0 41.0 37 35.50689935221392 38.0 34.0 40.0 28.0 41.0 38 35.37704946998737 38.0 34.0 40.0 27.0 41.0 39 35.32281939220421 38.0 34.0 40.0 27.0 41.0 40 35.12719403641018 38.0 34.0 40.0 25.0 41.0 41 35.089891401703184 38.0 34.0 40.0 25.0 41.0 42 35.06105297042235 37.0 34.0 40.0 26.0 41.0 43 34.96934774200098 37.0 34.0 40.0 25.0 41.0 44 34.8331722756297 37.0 34.0 40.0 24.0 41.0 45 34.728345877415386 37.0 34.0 40.0 24.0 41.0 46 34.69821020343387 37.0 34.0 40.0 24.0 41.0 47 34.611888949856656 37.0 34.0 40.0 24.0 41.0 48 34.494500693276315 36.0 34.0 40.0 23.0 41.0 49 34.44252488791283 36.0 34.0 40.0 24.0 41.0 50 34.33119428570694 36.0 34.0 40.0 24.0 41.0 51 33.97086183433588 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 12.0 12 12.0 13 18.0 14 32.0 15 90.0 16 210.0 17 660.0 18 1467.0 19 2794.0 20 4848.0 21 7744.0 22 11620.0 23 16805.0 24 24405.0 25 34127.0 26 45240.0 27 53300.0 28 57454.0 29 62609.0 30 72551.0 31 87126.0 32 108843.0 33 141813.0 34 250328.0 35 418431.0 36 196282.0 37 251170.0 38 407116.0 39 855392.0 40 250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.197966046808677 23.846552701207546 31.792951326734254 14.162529925249522 2 30.278698362480068 25.289132845619765 32.06537871905154 12.366790072848627 3 27.717366860749763 24.780708799533276 33.30791106016662 14.19401327955034 4 25.198730642555983 27.45782194299842 32.67499926110495 14.668448153340641 5 24.30090890516314 31.704412424231133 29.92361110218726 14.071067568418469 6 21.933200032382878 40.38639713488625 27.283346333602765 10.397056499128105 7 88.2016129757681 3.804345730921409 6.623840737918424 1.3702005553920706 8 89.30150644637742 2.7289964263180284 6.380069623189224 1.5894275041153243 9 85.64767042453697 4.578675617362877 7.518353510522507 2.2553004475776453 10 45.24508185029601 28.473127993328102 16.737033034391388 9.544757121984505 11 38.11484099621043 21.700865727991527 24.94085627013489 15.243437005663148 12 36.63663326004351 21.825803243171006 25.756307272397837 15.781256224387649 13 23.9979619346971 32.53068984526895 26.685933622808854 16.785414597225095 14 16.60371066668894 36.849531412034864 29.07879705315804 17.46796086811816 15 15.34453712401486 27.022034492905966 42.60523471804407 15.0281936650351 16 20.138134823288432 23.753419799046245 39.326114864126836 16.782330513538486 17 20.24161225614857 23.196068050306547 27.96338678650045 28.598932907044432 18 23.014171364539976 25.463961839604515 32.781528651779965 18.740338144075537 19 26.617891026473 26.950682931781355 27.651765830665813 18.779660211079825 20 28.92260106477989 26.78809389492784 27.00124905389308 17.288055986399193 21 23.231278005728687 26.79275214632949 31.964374978315035 18.011594869626787 22 23.709600109998984 22.310454144173203 30.54341554558083 23.43653020024698 23 20.096981581595216 26.785941461521556 30.067631385177634 23.049445571705586 24 20.309494223125746 25.768258096683454 36.88570514360907 17.03654253658173 25 19.712242141690513 27.071187076661325 32.9521812824391 20.264389499209063 26 17.683107831130997 33.78854622720188 28.526199933435194 20.002146008231932 27 17.948628161025148 33.9214830844435 30.797466939265394 17.33242181526596 28 15.564631471274973 29.81120267698464 36.58744855041642 18.03671730132397 29 16.962492402231337 27.202067878111873 35.34960658657473 20.485833133082064 30 19.35477756688928 29.260115473233366 33.45543306317617 17.929673896701185 31 26.37071456933984 27.006710452088118 28.27083137900947 18.351743599562575 32 26.753462205196936 27.72533407694018 28.30857927829872 17.212624439564166 33 25.44121672241576 28.625790135815336 26.778809517996272 19.15418362377263 34 19.943709047545006 28.390660880582995 29.279808632607246 22.385821439264756 35 19.327952463990112 29.312095133701455 30.434573092140855 20.92537931016758 36 27.57691254952203 25.475527153429304 28.54679261721767 18.40076767983099 37 20.01258691654598 30.818573636995637 30.363574915605334 18.805264530853044 38 20.228504900480473 31.5147734033763 26.81533663415957 21.441385061983656 39 20.20955063615651 30.316799646358405 28.380380601627625 21.093269115857456 40 23.446360716998054 27.240908057040127 27.755050508295543 21.557680717666276 41 18.699538286971418 25.757046167447754 29.66599373674005 25.877421808840783 42 21.70847955959285 25.743135664986273 27.875972289508077 24.672412485912805 43 21.519579433787936 26.333095173537536 29.045418272424822 23.101907120249706 44 20.073433317613073 29.665800981509634 29.335804027042272 20.924961673835018 45 19.155982672589822 34.34024382251613 25.56872430733408 20.935049197559977 46 22.79661496114697 30.46840163507837 26.99646229900448 19.73852110477018 47 20.590177964479068 29.332270181151365 28.290267531409462 21.787284322960105 48 21.9695665191875 27.77037454911339 30.5180682327815 19.741990698917615 49 21.288626541881214 26.01051929544108 31.23559957799455 21.465254584683155 50 19.257211294428476 31.41174573272046 29.309011050014846 20.022031922836227 51 19.46098569884694 32.27075941705678 26.783499895269657 21.48475498882662 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3185.0 1 4426.0 2 5667.0 3 19497.5 4 33328.0 5 23812.0 6 14296.0 7 14102.5 8 13909.0 9 14395.0 10 14881.0 11 14937.0 12 14993.0 13 14629.5 14 14266.0 15 13583.5 16 12901.0 17 12608.5 18 12316.0 19 12343.0 20 12370.0 21 13029.0 22 13688.0 23 15757.5 24 17827.0 25 20505.0 26 27741.5 27 32300.0 28 37471.0 29 42642.0 30 49164.0 31 55686.0 32 71549.0 33 87412.0 34 99174.0 35 110936.0 36 115460.5 37 119985.0 38 133773.0 39 147561.0 40 186328.0 41 225095.0 42 254375.5 43 283656.0 44 290402.0 45 297148.0 46 285263.5 47 273379.0 48 261326.0 49 249273.0 50 231730.5 51 214188.0 52 193835.5 53 173483.0 54 163378.5 55 153274.0 56 143538.0 57 133802.0 58 115360.0 59 96918.0 60 85032.0 61 73146.0 62 61269.0 63 49392.0 64 41788.5 65 34185.0 66 27157.5 67 20130.0 68 16265.0 69 12400.0 70 9792.5 71 7185.0 72 6717.5 73 6250.0 74 4369.0 75 2137.0 76 1786.0 77 1462.5 78 1139.0 79 753.0 80 367.0 81 396.0 82 425.0 83 271.5 84 118.0 85 83.0 86 48.0 87 70.0 88 92.0 89 63.0 90 34.0 91 23.0 92 12.0 93 10.5 94 9.0 95 5.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3112756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.274539966429703 #Duplication Level Percentage of deduplicated Percentage of total 1 81.2163730691999 13.217591094431588 2 8.939878531650507 2.9098482091674613 3 2.8900717875761344 1.4110376643827622 4 1.3124657082874382 0.8543910249636953 5 0.7332094899707832 0.5966323574147525 6 0.49123072676875523 0.479673245732185 7 0.3338028898766978 0.3802741930545636 8 0.2636058305863032 0.34320509002085514 9 0.20096390514262227 0.29435355954480547 >10 1.5961909150621123 5.518464126574294 >50 0.4529841983204006 5.399393075077213 >100 1.4955849880444232 60.66948416149438 >500 0.07105765365499263 6.600343939622884 >1k 0.0023818207929047807 0.6450169471117156 >5k 0.0 0.0 >10k+ 1.984850660753984E-4 0.6802913114068876 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21060 0.6765708587502522 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4774 0.15336891166541805 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.637761520658864E-5 0.0 0.0 0.022905746547432566 0.0 2 9.637761520658864E-5 0.0 0.0 0.10685064939237127 0.0 3 9.637761520658864E-5 0.0 0.0 0.16294242144260584 0.0 4 1.2850348694211816E-4 0.0 0.0 0.29787108273182994 0.0 5 1.2850348694211816E-4 0.0 0.0 0.5454973020692917 0.0 6 1.2850348694211816E-4 0.0 0.0 0.8016368774166687 0.0 7 1.2850348694211816E-4 0.0 0.0 0.9332244480453977 0.0 8 1.6062935867764772E-4 0.0 0.0 1.2106956022251665 0.0 9 1.6062935867764772E-4 0.0 0.0 1.2972105748089475 0.0 10 1.6062935867764772E-4 0.0 0.0 1.4573901712822976 0.0 11 1.6062935867764772E-4 0.0 0.0 1.6990731043486864 0.0 12 1.6062935867764772E-4 0.0 0.0 1.8748337486137687 0.0 13 1.6062935867764772E-4 0.0 0.0 1.942555086232265 0.0 14 1.6062935867764772E-4 0.0 0.0 1.9772510277066369 0.0 15 1.6062935867764772E-4 0.0 0.0 2.025118576592576 0.0 16 1.6062935867764772E-4 0.0 0.0 2.1327723727783354 0.0 17 1.6062935867764772E-4 0.0 0.0 2.2631070344093787 0.0 18 1.6062935867764772E-4 0.0 0.0 2.420973568117771 0.0 19 1.6062935867764772E-4 0.0 0.0 2.513206945870476 0.0 20 1.6062935867764772E-4 0.0 0.0 2.608877791898883 0.0 21 1.6062935867764772E-4 0.0 0.0 2.739051824171249 0.0 22 1.6062935867764772E-4 0.0 0.0 2.874237492434357 0.0 23 1.6062935867764772E-4 0.0 0.0 3.0165229783510177 0.0 24 1.6062935867764772E-4 0.0 0.0 3.123566382973802 0.0 25 1.6062935867764772E-4 0.0 0.0 3.213069061628987 0.0 26 1.6062935867764772E-4 0.0 0.0 3.3081937678378903 0.0 27 1.6062935867764772E-4 0.0 0.0 3.4278947659244734 0.0 28 1.6062935867764772E-4 0.0 0.0 3.5370906039535384 0.0 29 1.9275523041317727E-4 0.0 0.0 3.672244146344911 0.0 30 1.9275523041317727E-4 0.0 0.0 3.823460624604049 0.0 31 1.9275523041317727E-4 0.0 0.0 3.9545020554132737 0.0 32 2.248811021487068E-4 0.0 0.0 4.071118969813246 0.0 33 2.248811021487068E-4 0.0 0.0 4.187125492650243 0.0 34 2.248811021487068E-4 0.0 0.0 4.320512112096162 0.0 35 2.248811021487068E-4 0.0 0.0 4.479278170213148 0.0 36 2.248811021487068E-4 0.0 0.0 4.602898524651466 0.0 37 2.248811021487068E-4 0.0 0.0 4.741071898985979 0.0 38 2.248811021487068E-4 0.0 0.0 4.899773705359495 0.0 39 2.248811021487068E-4 0.0 0.0 5.154531868222244 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 35 1.2128294E-7 45.000004 37 TAGCGAT 35 1.2128294E-7 45.000004 15 CGTTACC 30 2.166702E-6 45.000004 17 TCGTCTA 55 1.8189894E-12 45.000004 10 TACCTCG 70 0.0 45.000004 34 ATACCCG 65 0.0 45.000004 32 GCGTACA 30 2.166702E-6 45.000004 36 TACGTCC 75 0.0 45.000004 28 ACGCGAG 20 7.0351455E-4 45.0 1 CTCCGTA 45 3.8562575E-10 45.0 45 TCCGATT 40 6.8212103E-9 45.0 43 GCGCGAT 50 2.1827873E-11 45.0 9 CGCGACA 40 6.8212103E-9 45.0 29 ATATCCG 40 6.8212103E-9 45.0 15 TCGCTAA 40 6.8212103E-9 45.0 26 GCGATCG 20 7.0351455E-4 45.0 9 ATGCGTA 25 3.8923474E-5 45.0 44 GTACGTA 50 2.1827873E-11 45.0 14 GTTAGCG 440 0.0 44.48864 1 TACGGAC 85 0.0 42.35294 30 >>END_MODULE