##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547504_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3171290 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.64909737047069 31.0 31.0 33.0 30.0 34.0 2 32.09529875854936 33.0 31.0 34.0 30.0 34.0 3 32.16076801553942 33.0 31.0 34.0 30.0 34.0 4 35.882670774353656 37.0 35.0 37.0 35.0 37.0 5 35.826047444415366 37.0 35.0 37.0 35.0 37.0 6 35.87947239136125 37.0 35.0 37.0 35.0 37.0 7 36.17601922246152 37.0 35.0 37.0 35.0 37.0 8 36.179044805110856 37.0 35.0 37.0 35.0 37.0 9 38.01311516764471 39.0 39.0 39.0 35.0 39.0 10 37.52923384490223 39.0 37.0 39.0 35.0 39.0 11 37.23538402353616 39.0 37.0 39.0 34.0 39.0 12 36.814724607336444 39.0 35.0 39.0 33.0 39.0 13 36.629395608727044 39.0 35.0 39.0 33.0 39.0 14 37.73119708383655 40.0 36.0 41.0 33.0 41.0 15 37.874645648931505 40.0 36.0 41.0 33.0 41.0 16 37.95409596725623 40.0 36.0 41.0 33.0 41.0 17 37.87877456807797 40.0 36.0 41.0 33.0 41.0 18 37.75396825897348 39.0 36.0 41.0 33.0 41.0 19 37.74897029284613 40.0 36.0 41.0 33.0 41.0 20 37.6451831904367 40.0 35.0 41.0 33.0 41.0 21 37.53866533808009 39.0 35.0 41.0 33.0 41.0 22 37.47803322937984 39.0 35.0 41.0 33.0 41.0 23 37.39408284956595 39.0 35.0 41.0 32.0 41.0 24 37.311720782394545 39.0 35.0 41.0 32.0 41.0 25 37.21133797287539 39.0 35.0 41.0 32.0 41.0 26 37.19965093069382 39.0 35.0 41.0 32.0 41.0 27 37.153668381005836 39.0 35.0 41.0 32.0 41.0 28 37.14283020474318 39.0 35.0 41.0 32.0 41.0 29 37.105427129023205 39.0 35.0 41.0 32.0 41.0 30 37.03936694531247 39.0 35.0 41.0 32.0 41.0 31 37.00231104692412 39.0 35.0 41.0 32.0 41.0 32 36.89965849859205 39.0 35.0 41.0 31.0 41.0 33 36.81840292120872 39.0 35.0 41.0 31.0 41.0 34 36.71073317167462 39.0 35.0 41.0 31.0 41.0 35 36.53783917585588 39.0 35.0 41.0 30.0 41.0 36 36.430848645188554 39.0 35.0 41.0 30.0 41.0 37 36.38009012105484 39.0 35.0 41.0 30.0 41.0 38 36.24391651346928 39.0 35.0 41.0 30.0 41.0 39 36.15473198603723 39.0 35.0 41.0 30.0 41.0 40 35.997651428913784 39.0 35.0 41.0 29.0 41.0 41 35.925115016286746 38.0 35.0 41.0 29.0 41.0 42 35.89307663442952 38.0 35.0 41.0 29.0 41.0 43 35.80029956263855 38.0 35.0 41.0 28.0 41.0 44 35.66966975584068 38.0 35.0 40.0 28.0 41.0 45 35.57516562660621 38.0 35.0 40.0 28.0 41.0 46 35.51816768570519 38.0 34.0 40.0 27.0 41.0 47 35.44165245058005 38.0 34.0 40.0 27.0 41.0 48 35.303532316502114 38.0 34.0 40.0 27.0 41.0 49 35.206890571344786 38.0 34.0 40.0 27.0 41.0 50 35.12730213887724 38.0 34.0 40.0 26.0 41.0 51 34.760084382065344 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 10.0 11 17.0 12 22.0 13 40.0 14 49.0 15 102.0 16 245.0 17 530.0 18 1037.0 19 2082.0 20 3464.0 21 5353.0 22 8203.0 23 11891.0 24 17320.0 25 25381.0 26 35054.0 27 41485.0 28 46754.0 29 52986.0 30 62893.0 31 77269.0 32 97447.0 33 127809.0 34 216826.0 35 324603.0 36 218505.0 37 298393.0 38 485555.0 39 1009664.0 40 297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.35371410372435 23.603643943001114 29.73389377824166 13.308748175032873 2 30.34456010014852 25.403510874123782 31.22265702600519 13.02927199972251 3 29.406172251670455 25.234589078892185 31.993983520901587 13.36525514853577 4 27.170425915006195 27.747635820123673 31.023778966918826 14.058159297951306 5 24.0089048935922 31.794758599812695 29.288932894815673 14.907403611779433 6 22.530862834997745 40.830955226422056 26.0027622828565 10.635419655723696 7 89.36514793664408 3.4118607885119308 5.577477934846703 1.645513339997288 8 89.85488555130561 2.907302706469607 5.495870765524439 1.7419409767003333 9 84.35772193649903 6.11634382223007 6.844091836445106 2.6818424048257965 10 40.27730040456723 38.422597744135665 12.092460796710487 9.20764105458662 11 32.55148535769356 22.38243743082468 28.276127380340494 16.78994983114127 12 31.457577200445247 21.595407547086516 29.42619564908917 17.520819603379067 13 25.352963620482516 26.504198606876066 29.761989600446505 18.38084817219491 14 19.04817913215127 31.383853258453186 30.974808358743605 18.59315925065194 15 18.535107164592326 27.96187040604927 36.54304715115931 16.959975278199092 16 24.005310141929627 26.517505494609452 33.57718783208095 15.899996531379976 17 23.413595098524574 25.72010128370474 28.567617594102085 22.2986860236686 18 24.06251083943758 26.740159367323706 30.848329859457824 18.348999933780892 19 26.68589123038259 27.119184937359876 27.7726729501244 18.422250882133138 20 27.8797902430872 27.66959186955466 27.39686373683895 17.05375415051919 21 26.53494319346386 25.247265308439154 31.098953422739644 17.118838075357345 22 25.120250749694918 22.503050808976788 30.91376064629851 21.46293779502978 23 21.095074874893182 25.694401962608275 31.834426999738273 21.376096162760263 24 21.345950701449567 26.19069842240855 32.83171832282762 19.631632553314265 25 21.468046126339754 27.955059297635977 30.886137817733477 19.69075675829079 26 21.11758937214824 32.15063901440738 26.900378079582755 19.831393533861615 27 19.835398213345357 30.88818745683933 30.785358639544157 18.491055690271153 28 18.350671177974892 29.201649801815666 33.08338247211702 19.364296548092415 29 19.61075776734389 26.869665025904283 32.97837788407872 20.541199322673105 30 21.297736883098047 27.101873370142748 32.004168650612215 19.596221096146994 31 24.87788880865515 26.221569140633623 29.162927389169706 19.737614661541517 32 25.136773994179023 27.04565019282374 29.03045763711297 18.787118175884263 33 24.394489308767096 27.429563363804633 28.485095970409517 19.69085135701875 34 21.771897240555106 27.752271157793835 29.946204856698692 20.52962674495237 35 21.276893630036987 27.57811489961498 30.42405456454629 20.72093690580174 36 24.813214811638165 26.378981423963122 29.498279879796552 19.309523884602164 37 21.988023801039954 29.26793197720801 29.20404630292405 19.539997918827982 38 21.55791491790407 29.561282632619534 27.702102299064418 21.178700150411977 39 20.8707182250756 28.792352638831513 29.21202412898221 21.12490500711067 40 22.72936249917226 27.449618294132673 29.06615289046413 20.754866316230935 41 20.550154668920218 26.445232066446145 29.73263246186883 23.271980802764805 42 21.757329036448887 26.57729189068171 28.863553948077914 22.80182512479149 43 21.759914735013197 26.620964970091038 29.31255104389696 22.306569250998805 44 21.341189232142124 28.210223599859997 29.561787159168667 20.886800008829216 45 20.449722352733428 29.959511744432078 28.04609480684516 21.54467109598933 46 21.985658832840894 28.724367686335846 28.19877715377654 21.09119632704672 47 21.369537317621536 28.215363464079285 29.106546547304095 21.308552670995084 48 21.696596653097007 27.574236351768523 30.120298049058903 20.608868946075575 49 21.263271413210397 26.448164627012982 31.036959723014924 21.251604236761697 50 20.683444276619294 29.273828631251003 29.603568264018744 20.43915882811096 51 20.692904149415536 29.727082669828363 28.027458857436567 21.552554323319534 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2192.0 1 3716.5 2 5241.0 3 15279.5 4 25318.0 5 18395.5 6 11473.0 7 11074.5 8 10676.0 9 10827.0 10 10978.0 11 10725.0 12 10472.0 13 10758.0 14 11044.0 15 10475.0 16 9906.0 17 9935.5 18 9965.0 19 10253.5 20 10542.0 21 13087.5 22 15633.0 23 19711.5 24 23790.0 25 28750.5 26 38784.0 27 43857.0 28 52967.0 29 62077.0 30 71833.0 31 81589.0 32 91063.0 33 100537.0 34 109738.0 35 118939.0 36 128738.0 37 138537.0 38 144793.5 39 151050.0 40 176919.5 41 202789.0 42 221638.0 43 240487.0 44 245492.5 45 250498.0 46 246780.0 47 243062.0 48 237939.0 49 232816.0 50 218985.5 51 205155.0 52 192351.0 53 179547.0 54 169925.0 55 160303.0 56 150269.5 57 140236.0 58 126597.0 59 112958.0 60 104504.5 61 96051.0 62 84313.5 63 72576.0 64 62232.5 65 51889.0 66 43719.0 67 35549.0 68 29826.5 69 24104.0 70 19062.0 71 14020.0 72 11434.0 73 8848.0 74 7154.5 75 4145.5 76 2830.0 77 2457.0 78 2084.0 79 1591.0 80 1098.0 81 952.5 82 807.0 83 545.0 84 283.0 85 218.0 86 153.0 87 111.0 88 69.0 89 56.5 90 44.0 91 33.0 92 22.0 93 17.5 94 13.0 95 11.0 96 9.0 97 5.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3171290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.196579357600108 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02133139366018 13.284650029334344 2 7.396867489219142 2.396079025735802 3 2.142457918471998 1.0410146909055136 4 1.0444832827351667 0.676682255060272 5 0.6373137688445752 0.5161151516391188 6 0.43624936335580133 0.4239448459976858 7 0.32277529327304233 0.36594989565186353 8 0.2445738200096511 0.3169007427662176 9 0.19609598274178344 0.2858475731565489 >10 2.3546117052015045 9.25444168442035 >50 1.2237294613217047 14.680161882312662 >100 1.9742182368607197 55.607161207443646 >500 0.003920210596060379 0.42763210358851417 >1k 0.0011760631788181137 0.2820403569621648 >5k 0.0 0.0 >10k+ 1.9601052980301896E-4 0.4413785550253238 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13903 0.4384020382872585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2613163728325067E-4 0.0 0.0 0.021473911247473425 0.0 2 1.2613163728325067E-4 0.0 0.0 0.07016072323880818 0.0 3 1.2613163728325067E-4 0.0 0.0 0.10200896165282898 0.0 4 1.2613163728325067E-4 0.0 0.0 0.1682596041358564 0.0 5 1.2613163728325067E-4 0.0 0.0 0.2880846595549445 0.0 6 1.2613163728325067E-4 0.0 0.0 0.4169596599491059 0.0 7 1.2613163728325067E-4 0.0 0.0 0.4856383364498359 0.0 8 1.2613163728325067E-4 0.0 0.0 0.6404018553963844 0.0 9 1.2613163728325067E-4 0.0 0.0 0.6954898479798441 0.0 10 1.2613163728325067E-4 0.0 0.0 0.7988862576427889 0.0 11 1.2613163728325067E-4 0.0 0.0 0.9430547190575445 0.0 12 1.2613163728325067E-4 0.0 0.0 1.0601994771843635 0.0 13 1.2613163728325067E-4 0.0 0.0 1.1056068666063337 0.0 14 1.5766454660406332E-4 0.0 0.0 1.1261347905741828 0.0 15 1.5766454660406332E-4 0.0 0.0 1.158582154265299 0.0 16 1.5766454660406332E-4 0.0 0.0 1.2257787840279508 0.0 17 1.5766454660406332E-4 0.0 0.0 1.3110122379221074 0.0 18 1.5766454660406332E-4 0.0 0.0 1.4090165200911933 0.0 19 1.5766454660406332E-4 0.0 0.0 1.4795871711511719 0.0 20 1.5766454660406332E-4 0.0 0.0 1.55245972459157 0.0 21 1.5766454660406332E-4 0.0 0.0 1.6423600490652068 0.0 22 1.5766454660406332E-4 0.0 0.0 1.7477745649246836 0.0 23 1.5766454660406332E-4 0.0 0.0 1.8484591443860385 0.0 24 1.5766454660406332E-4 0.0 0.0 1.928174339149053 0.0 25 1.5766454660406332E-4 0.0 0.0 2.002055945687717 0.0 26 1.5766454660406332E-4 0.0 0.0 2.075149229493361 0.0 27 1.5766454660406332E-4 0.0 0.0 2.161675532669671 0.0 28 1.5766454660406332E-4 0.0 0.0 2.2452062094605036 0.0 29 1.5766454660406332E-4 0.0 0.0 2.3448502029142713 0.0 30 1.5766454660406332E-4 0.0 0.0 2.4539225362549626 0.0 31 2.2073036524568866E-4 0.0 0.0 2.5483005338521547 0.0 32 2.2073036524568866E-4 0.0 0.0 2.6342277117513695 0.0 33 2.2073036524568866E-4 0.0 0.0 2.7220153313005118 0.0 34 2.2073036524568866E-4 0.0 0.0 2.8185375667315196 0.0 35 2.2073036524568866E-4 0.0 0.0 2.9249926685985828 0.0 36 2.2073036524568866E-4 0.0 0.0 3.0248573924175965 0.0 37 2.2073036524568866E-4 0.0 0.0 3.1362000952293863 0.0 38 2.5226327456650134E-4 0.0 0.0 3.2655480892633597 0.0 39 2.83796183887314E-4 0.0 0.0 3.4902831339927918 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTTC 30 2.1667147E-6 45.000004 33 CGGTCGA 20 7.035166E-4 45.0 42 TACGGGA 1315 0.0 43.11787 4 CGCATCG 75 0.0 42.000004 21 ATAACGG 160 0.0 40.78125 2 CGTTTTT 7190 0.0 40.462444 1 GCGTAAG 180 0.0 40.0 1 CGTAAGG 480 0.0 39.843754 2 CGGTCTA 385 0.0 39.74026 31 TACGACG 40 3.460791E-7 39.375 1 TAGGGAC 3550 0.0 39.359154 5 GGCGATA 695 0.0 39.17266 8 CACGACG 385 0.0 39.155846 26 GCTATCG 35 6.2517665E-6 38.57143 1 CGACATA 70 0.0 38.57143 11 TAACGGC 70 0.0 38.57143 13 ACGGGAT 1725 0.0 38.347828 5 GGGCGAT 3505 0.0 38.131237 7 ACGGGAC 950 0.0 37.657898 5 CGTAATG 30 1.1403746E-4 37.500004 23 >>END_MODULE