##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547503_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4477049 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59058723726276 31.0 31.0 33.0 30.0 34.0 2 32.028323790961416 33.0 31.0 34.0 30.0 34.0 3 32.08872920533146 33.0 31.0 34.0 30.0 34.0 4 35.80866838848536 37.0 35.0 37.0 35.0 37.0 5 35.76066980727707 37.0 35.0 37.0 35.0 37.0 6 35.806643170534876 37.0 35.0 37.0 35.0 37.0 7 36.145613326992844 37.0 35.0 37.0 35.0 37.0 8 36.16058501928391 37.0 35.0 37.0 35.0 37.0 9 38.07249842474362 39.0 39.0 39.0 35.0 39.0 10 37.409943246098045 39.0 37.0 39.0 35.0 39.0 11 37.147789983982754 39.0 37.0 39.0 33.0 39.0 12 36.631233654132444 39.0 35.0 39.0 33.0 39.0 13 36.3883294554069 39.0 35.0 39.0 32.0 39.0 14 37.52290738832655 40.0 35.0 41.0 33.0 41.0 15 37.65021289693278 40.0 35.0 41.0 33.0 41.0 16 37.74458845547592 40.0 35.0 41.0 33.0 41.0 17 37.66371286085991 40.0 35.0 41.0 33.0 41.0 18 37.56310172169212 39.0 36.0 41.0 33.0 41.0 19 37.543863379650304 39.0 36.0 41.0 33.0 41.0 20 37.43239553554138 39.0 35.0 41.0 33.0 41.0 21 37.31457149564367 39.0 35.0 41.0 32.0 41.0 22 37.233813835854825 39.0 35.0 41.0 32.0 41.0 23 37.15543095463105 39.0 35.0 41.0 32.0 41.0 24 37.04265845649668 39.0 35.0 41.0 32.0 41.0 25 36.94242479812037 39.0 35.0 41.0 32.0 41.0 26 36.90297738532681 39.0 35.0 41.0 32.0 41.0 27 36.8538702614155 39.0 35.0 41.0 32.0 41.0 28 36.88308481770023 39.0 35.0 41.0 32.0 41.0 29 36.85634845631576 39.0 35.0 41.0 31.0 41.0 30 36.80742024489792 38.0 35.0 41.0 31.0 41.0 31 36.725742112717555 39.0 35.0 41.0 31.0 41.0 32 36.615099812398746 39.0 35.0 41.0 31.0 41.0 33 36.53526753895255 39.0 35.0 41.0 31.0 41.0 34 36.448893233020236 39.0 35.0 41.0 30.0 41.0 35 36.2943322711009 38.0 35.0 41.0 30.0 41.0 36 36.176160904202746 38.0 35.0 41.0 30.0 41.0 37 36.12682818526221 38.0 35.0 41.0 30.0 41.0 38 36.02387755863293 38.0 35.0 41.0 30.0 41.0 39 35.97235857816164 38.0 35.0 41.0 30.0 41.0 40 35.834305141623425 38.0 35.0 41.0 29.0 41.0 41 35.79680208994809 38.0 35.0 41.0 29.0 41.0 42 35.7716790680647 38.0 35.0 40.0 29.0 41.0 43 35.66382074442339 38.0 35.0 40.0 29.0 41.0 44 35.53927151567919 38.0 35.0 40.0 28.0 41.0 45 35.42553655320726 38.0 34.0 40.0 28.0 41.0 46 35.38503331100464 38.0 34.0 40.0 28.0 41.0 47 35.32272217704117 38.0 34.0 40.0 27.0 41.0 48 35.188971798164374 37.0 34.0 40.0 27.0 41.0 49 35.1148368043325 37.0 34.0 40.0 27.0 41.0 50 34.9892978611581 37.0 34.0 40.0 27.0 41.0 51 34.611415912579915 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 4.0 11 7.0 12 7.0 13 13.0 14 30.0 15 97.0 16 237.0 17 634.0 18 1322.0 19 2643.0 20 4681.0 21 7624.0 22 12048.0 23 17807.0 24 26450.0 25 38151.0 26 51142.0 27 61546.0 28 69328.0 29 78834.0 30 94333.0 31 115828.0 32 145678.0 33 189499.0 34 332244.0 35 555980.0 36 293837.0 37 387149.0 38 632299.0 39 1357186.0 40 407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.91530849896885 23.917674343077326 30.850745658580013 13.316271499373805 2 28.83935377968836 26.03710613844075 31.62312943190928 13.500410649961617 3 28.678868602956992 25.484442989120737 32.29066735700235 13.546021050919926 4 24.347354697257053 27.313013549773522 32.9036380883926 15.435993664576822 5 23.33954799243877 32.27762305036197 30.33643366422838 14.046395292970884 6 20.49361085840249 41.780489782443745 27.044019397598728 10.681879961555033 7 90.98589271638528 3.0518540225939006 4.844575076127154 1.1176781848936654 8 92.51209892945107 1.9300213153798405 4.3149404887013745 1.2429392664677112 9 89.2523847739884 3.2226361605602265 5.596253246278966 1.928725819172406 10 41.29820781501387 27.881356670431796 14.807342961848308 16.013092552706034 11 33.113017078883885 28.917530274964605 22.694725923258822 15.274726722892693 12 32.78695408515743 23.39719757366962 26.299689818002886 17.516158523170063 13 21.641241809057707 31.9935073303866 27.513770789642912 18.851480070912782 14 17.36320062612672 34.98887325110804 29.980350896315855 17.667575226449387 15 15.89495670027288 27.41278909388751 40.3634626290666 16.328791576773007 16 19.768110646097462 23.512407391565294 38.864640525488994 17.854841436848247 17 19.348526227879123 23.426413246761427 29.07368224024352 28.15137828511593 18 21.544481644047227 26.291224420371545 32.45088450003563 19.7134094355456 19 26.032951616120354 27.185831560029833 27.209932256716424 19.571284567133397 20 27.276382277701227 27.310243868226593 26.981701562792814 18.431672291279366 21 23.94181971204693 26.592762330722756 30.50902502965681 18.9563929275735 22 23.906439263899053 23.02009649659854 29.59570020341524 23.477764036087166 23 20.416506497918608 28.654343519581758 28.339001873778912 22.590148108720722 24 20.164264451874438 26.052361723090367 35.47618085037711 18.307192974658086 25 19.216519631569813 27.547275001904154 33.14221041583418 20.09399495069185 26 19.694133345424632 32.60346268267334 26.799527992657662 20.902875979244364 27 18.275408645292917 32.50462525650267 30.042713403404786 19.17725269479963 28 16.762715797839157 29.530411661788825 35.590139844348364 18.116732696023654 29 17.498244937681047 27.653192984932705 34.61927711758348 20.22928495980276 30 19.550556627814437 29.271558117858437 32.500269708908704 18.677615545418423 31 25.31547007861652 27.320496157178535 27.786673766581515 19.577359997623432 32 25.67182088022713 27.64229294787705 28.651350476619758 18.034535695276062 33 24.280569634149636 27.804699032778064 27.39328964235147 20.521441690720827 34 19.713543452394646 28.42944091074277 29.73420661690323 22.12280901995935 35 20.015260051877924 27.67485904219498 30.937074845506494 21.3728060604206 36 26.14997066147813 26.25204682816739 28.884785491514613 18.713197018839868 37 20.391266658015134 30.283519344997117 30.089105569315862 19.236108427671887 38 20.583446819545642 31.063787776278527 26.684094813346913 21.668670590828913 39 20.304714109673583 29.63740177960974 28.977748512468814 21.080135598247864 40 22.62664536394397 26.88998936576303 27.638495803820778 22.844869466472222 41 18.399307222235002 26.073357696107415 30.067640537327158 25.45969454433043 42 21.527818882482634 27.267269131966167 27.832708554228464 23.37220343132273 43 21.981220218943324 26.361985316667297 28.42443761504509 23.23235684934429 44 20.678129723395923 29.609995333980038 29.03472800945444 20.677146933169592 45 19.698131514754476 32.26091561651436 26.481617690581455 21.559335178149713 46 22.532766561187962 30.002865726955413 27.843117196170958 19.621250515685666 47 21.869829881245437 28.683492184249044 28.275433215048572 21.171244719456947 48 22.508732872925894 26.532901471482667 30.279833881648383 20.67853177394306 49 21.49377860282521 25.909187056027307 30.609291968883966 21.987742372263515 50 20.31898690409687 30.288902355100422 28.566339122042223 20.825771618760484 51 19.500769368394224 30.23933845709529 27.90740061142954 22.35249156308095 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4480.0 1 6222.0 2 7964.0 3 23226.0 4 38488.0 5 27394.5 6 16301.0 7 16205.0 8 16109.0 9 16351.0 10 16593.0 11 16626.5 12 16660.0 13 16312.0 14 15964.0 15 15254.0 16 14544.0 17 14417.0 18 14290.0 19 15352.5 20 16415.0 21 18075.5 22 19736.0 23 23894.0 24 28052.0 25 33008.5 26 41961.5 27 45958.0 28 60046.5 29 74135.0 30 89051.5 31 103968.0 32 110352.5 33 116737.0 34 136489.5 35 156242.0 36 159419.5 37 162597.0 38 191420.5 39 220244.0 40 260758.0 41 301272.0 42 347641.0 43 394010.0 44 410109.5 45 426209.0 46 406724.5 47 387240.0 48 368178.5 49 349117.0 50 331624.0 51 314131.0 52 294251.0 53 274371.0 54 245422.0 55 216473.0 56 200966.0 57 185459.0 58 170653.5 59 155848.0 60 137221.5 61 118595.0 62 101615.5 63 84636.0 64 69696.0 65 54756.0 66 41507.0 67 28258.0 68 23342.0 69 18426.0 70 13723.5 71 9021.0 72 8095.0 73 7169.0 74 5499.0 75 3057.0 76 2285.0 77 1808.0 78 1331.0 79 931.0 80 531.0 81 433.0 82 335.0 83 231.5 84 128.0 85 101.5 86 75.0 87 67.0 88 59.0 89 40.5 90 22.0 91 14.5 92 7.0 93 6.0 94 5.0 95 6.5 96 8.0 97 4.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4477049.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.657644336982138 #Duplication Level Percentage of deduplicated Percentage of total 1 80.22483010992765 11.75907026746135 2 9.296503575606781 2.7252968597745384 3 2.9492065501640705 1.2968526206580904 4 1.349687614263907 0.7913296406364116 5 0.7612333104088976 0.5578943560718572 6 0.4809064995721999 0.4229373858043416 7 0.3219041847900348 0.33028499358669533 8 0.26363688937545593 0.30914366068589905 9 0.19577233430478055 0.25826051225342167 >10 1.6725471694433045 5.5134385007413425 >50 0.5935215378070178 6.406494173877928 >100 1.840951472070836 63.94998573297648 >500 0.04407707757040172 3.876644379806571 >1k 0.004914517359766045 1.099370432647238 >5k 1.5357866749268891E-4 0.17486556342125323 >10k+ 1.5357866749268891E-4 0.5281309195965528 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23461 0.5240282159073979 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7768 0.17350714723024027 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.467228301499492E-5 0.0 0.0 0.032231052195318834 0.0 2 4.467228301499492E-5 0.0 0.0 0.11304321216944464 0.0 3 4.467228301499492E-5 0.0 0.0 0.15983742862765182 0.0 4 4.467228301499492E-5 0.0 0.0 0.28862762055988217 0.0 5 4.467228301499492E-5 0.0 0.0 0.4908813819102717 0.0 6 4.467228301499492E-5 0.0 0.0 0.7200725299187032 0.0 7 4.467228301499492E-5 0.0 0.0 0.8278890849753934 0.0 8 4.467228301499492E-5 0.0 0.0 1.0755298858690177 0.0 9 4.467228301499492E-5 0.0 0.0 1.1451293028063798 0.0 10 4.467228301499492E-5 0.0 0.0 1.305033739858554 0.0 11 4.467228301499492E-5 0.0 0.0 1.524598010877254 0.0 12 4.467228301499492E-5 0.0 0.0 1.680347925609034 0.0 13 4.467228301499492E-5 0.0 0.0 1.7447653577166566 0.0 14 4.467228301499492E-5 0.0 0.0 1.767950272601439 0.0 15 4.467228301499492E-5 0.0 0.0 1.8077086044847845 0.0 16 4.467228301499492E-5 0.0 0.0 1.9106558806928402 0.0 17 4.467228301499492E-5 0.0 0.0 2.0399151315967283 0.0 18 4.467228301499492E-5 0.0 0.0 2.197742307488705 0.0 19 4.467228301499492E-5 0.0 0.0 2.290146924905222 0.0 20 4.467228301499492E-5 0.0 0.0 2.3863263502365064 0.0 21 4.467228301499492E-5 0.0 0.0 2.5311315556296123 0.0 22 4.467228301499492E-5 0.0 0.0 2.6765621729849283 0.0 23 4.467228301499492E-5 0.0 0.0 2.835550828235295 0.0 24 4.467228301499492E-5 0.0 0.0 2.9524805290270444 0.0 25 4.467228301499492E-5 0.0 0.0 3.051340291339228 0.0 26 4.467228301499492E-5 0.0 0.0 3.1471400022648846 6.700842452249239E-5 27 4.467228301499492E-5 0.0 0.0 3.2431184023226014 6.700842452249239E-5 28 4.467228301499492E-5 0.0 0.0 3.3509796296623064 6.700842452249239E-5 29 4.467228301499492E-5 0.0 0.0 3.469450524218073 6.700842452249239E-5 30 4.467228301499492E-5 0.0 0.0 3.613630317648969 6.700842452249239E-5 31 6.700842452249239E-5 0.0 0.0 3.7426438709962744 6.700842452249239E-5 32 6.700842452249239E-5 0.0 0.0 3.863080346004701 6.700842452249239E-5 33 6.700842452249239E-5 0.0 0.0 3.995310303729086 6.700842452249239E-5 34 6.700842452249239E-5 0.0 0.0 4.126691488076186 6.700842452249239E-5 35 6.700842452249239E-5 0.0 0.0 4.280297133223246 6.700842452249239E-5 36 6.700842452249239E-5 0.0 0.0 4.417351697513251 6.700842452249239E-5 37 6.700842452249239E-5 0.0 0.0 4.561732516217714 6.700842452249239E-5 38 6.700842452249239E-5 0.0 0.0 4.71323856406307 6.700842452249239E-5 39 6.700842452249239E-5 0.0 0.0 4.8847131224161275 6.700842452249239E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATATCG 20 7.0354773E-4 45.000004 18 CCGTCGA 20 7.0354773E-4 45.000004 21 GCTCGAC 30 2.1669166E-6 45.000004 26 TAGTCGA 65 0.0 44.999996 1 TAGACCG 205 0.0 42.80488 1 TCGCGCG 80 0.0 42.187504 1 GTCGTTA 70 0.0 41.785713 16 CGACTAG 60 3.6379788E-12 41.250004 19 CGAGGGT 870 0.0 41.12069 4 CTTACGC 55 6.184564E-11 40.909092 36 CGTTTTT 11215 0.0 40.62639 1 CGACGGT 405 0.0 40.555557 28 TACGGGA 1515 0.0 39.80198 4 GCGATAT 170 0.0 39.705883 9 CTTTACG 85 0.0 39.705883 1 CGGGTAC 365 0.0 39.452057 6 AGGGCGA 3560 0.0 39.248596 6 TAACGCC 260 0.0 38.942307 12 TAGGGTA 2380 0.0 38.85504 5 TAGGGAC 3865 0.0 38.712807 5 >>END_MODULE