##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547502_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2922982 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.587289281973 31.0 31.0 33.0 30.0 34.0 2 32.01491114211446 31.0 31.0 34.0 30.0 34.0 3 32.05761479201719 33.0 31.0 34.0 30.0 34.0 4 35.78447044832982 37.0 35.0 37.0 35.0 37.0 5 35.734327820013945 37.0 35.0 37.0 33.0 37.0 6 35.783055112894985 37.0 35.0 37.0 35.0 37.0 7 36.113485474765156 37.0 35.0 37.0 35.0 37.0 8 36.12435177500238 37.0 35.0 37.0 35.0 37.0 9 37.9573312459673 39.0 38.0 39.0 35.0 39.0 10 37.44142146616024 39.0 37.0 39.0 35.0 39.0 11 37.07863065869034 39.0 37.0 39.0 33.0 39.0 12 36.36947473504797 38.0 35.0 39.0 33.0 39.0 13 36.06651152829542 38.0 35.0 39.0 32.0 39.0 14 37.10747449009265 39.0 35.0 41.0 32.0 41.0 15 37.303562252521566 39.0 35.0 41.0 32.0 41.0 16 37.42511551559332 39.0 35.0 41.0 33.0 41.0 17 37.34020736357596 39.0 35.0 41.0 33.0 41.0 18 37.24010890248383 39.0 35.0 41.0 32.0 41.0 19 37.20747236897114 39.0 35.0 41.0 32.0 41.0 20 37.0783265172348 38.0 35.0 41.0 32.0 41.0 21 36.92756130554345 38.0 35.0 41.0 32.0 41.0 22 36.849952890575445 38.0 35.0 41.0 32.0 41.0 23 36.79580202683424 38.0 35.0 41.0 32.0 41.0 24 36.662549752273534 38.0 35.0 41.0 31.0 41.0 25 36.545672877903456 38.0 35.0 40.0 31.0 41.0 26 36.51087998489214 38.0 35.0 40.0 31.0 41.0 27 36.47094850395931 38.0 35.0 40.0 31.0 41.0 28 36.48871939683515 38.0 35.0 40.0 31.0 41.0 29 36.44153846995979 38.0 35.0 40.0 31.0 41.0 30 36.38574407916299 38.0 35.0 40.0 31.0 41.0 31 36.27374236310727 38.0 35.0 40.0 31.0 41.0 32 36.13693515731537 38.0 35.0 41.0 30.0 41.0 33 36.04729348316206 38.0 35.0 41.0 30.0 41.0 34 35.93455382208991 38.0 35.0 41.0 30.0 41.0 35 35.7706181563896 38.0 35.0 41.0 30.0 41.0 36 35.606838837871734 38.0 35.0 40.0 29.0 41.0 37 35.54873926695409 38.0 35.0 40.0 29.0 41.0 38 35.42692496908978 38.0 34.0 40.0 28.0 41.0 39 35.36073639865042 37.0 34.0 40.0 28.0 41.0 40 35.15401531723425 37.0 34.0 40.0 27.0 41.0 41 35.10679402062688 37.0 34.0 40.0 27.0 41.0 42 35.07281023283756 37.0 34.0 40.0 27.0 41.0 43 34.992770396807096 37.0 34.0 40.0 27.0 41.0 44 34.84374553110488 37.0 34.0 40.0 26.0 41.0 45 34.72371502800907 36.0 34.0 40.0 26.0 41.0 46 34.647096697824345 36.0 34.0 40.0 25.0 41.0 47 34.55619535118588 36.0 34.0 40.0 25.0 41.0 48 34.44579918726834 36.0 34.0 40.0 24.0 41.0 49 34.36003232315492 36.0 34.0 40.0 24.0 41.0 50 34.22337941184722 35.0 34.0 40.0 24.0 41.0 51 33.84372534623888 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 13.0 12 17.0 13 28.0 14 50.0 15 116.0 16 268.0 17 593.0 18 1244.0 19 2453.0 20 4189.0 21 6637.0 22 10032.0 23 14862.0 24 21375.0 25 30455.0 26 39723.0 27 46837.0 28 51376.0 29 57639.0 30 67188.0 31 82174.0 32 103112.0 33 136444.0 34 247231.0 35 415762.0 36 192208.0 37 251491.0 38 387288.0 39 751948.0 40 225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.13311542801153 24.011711327678377 29.39002019170833 13.46515305260176 2 30.560331880251056 25.751167814239018 30.210825793658667 13.477674511851253 3 28.27023909144839 25.91634159909298 31.6583885908295 14.155030718629124 4 24.991395773220635 28.079748694997097 30.873778901135896 16.055076630646376 5 23.319883598325273 32.73431037207892 29.496452595329014 14.449353434266786 6 22.74735184821528 40.37845597407031 26.623667200140133 10.25052497757427 7 87.55284842670945 3.8005365753193145 6.770414597147707 1.8762004008235424 8 88.70058043463833 2.9961867709072445 6.21300439072153 2.0902284037329 9 84.03359993321888 5.429181568685678 7.877742661432742 2.6594758366626956 10 47.56443932942454 27.799418539012557 14.163412569766082 10.472729561796823 11 40.807196212634906 21.729624062002433 22.93370263655404 14.52947708880862 12 37.0776829963373 21.876870948914497 25.140387453634677 15.90505860111352 13 22.402190639559187 35.32591032035093 25.94251350162266 16.32938553846722 14 16.979235588860963 37.829278456042495 28.64557496419752 16.54591099089902 15 16.32333007866624 24.975111033868835 43.129687421954706 15.571871465510224 16 19.648940705074473 22.91149928395043 40.39686183493432 17.04269817604077 17 20.148259551375958 21.776357158545622 27.72511086281065 30.35027242726777 18 23.24978395351049 24.68489371470642 32.73372877424493 19.331593557538156 19 26.89972090146296 26.061091036482605 26.368174692830813 20.67101336922362 20 29.9762365967358 25.921644402873508 25.33611223059191 18.76600676979879 21 24.406239928949272 26.94737771221308 29.674455744168114 18.971926614669542 22 24.176748265983164 24.15837661675645 27.330650684814344 24.334224432446046 23 20.295403803376143 29.523787693526682 26.27771912382628 23.903089379270895 24 20.712785778359226 25.760233898121847 35.248763078253646 18.278217245265278 25 19.73009070873512 26.07313353280999 32.857540689610815 21.33923506884408 26 19.80703268100864 32.02092931123079 26.991065973037127 21.180972034723446 27 19.459339811192816 31.932834345199524 29.208322186041514 19.399503657566143 28 16.91953628178347 28.64673815986551 35.88944440985268 18.54428114849835 29 17.546122418817493 25.695437057087588 35.24072334348963 21.517717180605285 30 19.787737317574997 27.29825226429721 33.21238379162102 19.701626626506766 31 26.559007205655043 26.85928274618181 26.29821189456521 20.283498153597932 32 27.093392980182568 26.55339649713888 27.622475950929566 18.73073457174899 33 24.789855017923475 26.852406207085778 27.434038252715894 20.923700522274853 34 19.8957092448739 27.754430235971345 29.488789188575225 22.861071330579524 35 20.231941216196336 26.600574344966887 30.857015198861987 22.310469239974793 36 27.729113624374012 24.929917461003864 27.866986522667602 19.473982391954518 37 20.602624306273526 29.422350188950873 29.736720924042636 20.23830458073296 38 21.255484980749113 30.638402836555272 25.070082538996136 23.036029643699482 39 20.528761381356436 29.27500066712693 28.026960138652925 22.169277812863715 40 24.051362615301773 26.1273247662832 26.541011884438564 23.280300733976468 41 19.202684108215514 25.672036297178703 28.666717756045024 26.458561838560758 42 22.92104433075537 26.41702891088621 26.14600432024556 24.51592243811286 43 22.823678011017513 26.43738483507596 27.06725528929018 23.67168186461634 44 20.6434730012022 28.526381619866285 28.64112745134934 22.189017927582174 45 19.082053875117943 32.41111303456539 25.184315195919783 23.322517894396885 46 22.843349702461392 29.0656938701641 27.149671123530695 20.941285303843816 47 21.670677410945398 27.691378188439064 28.0053725955206 22.632571805094933 48 22.97130122593981 25.566903935775176 29.643562635691907 21.818232202593105 49 22.063632276900783 24.04441765293115 30.627968287180696 23.263981782987376 50 20.140185604974643 30.149552751265656 28.348857433949306 21.36140420981039 51 19.392695541744697 30.80227657919207 26.183773967817796 23.621253911245432 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4077.0 1 5224.5 2 6372.0 3 15609.5 4 24847.0 5 18414.5 6 11982.0 7 11966.0 8 11950.0 9 12340.5 10 12731.0 11 12474.5 12 12218.0 13 12263.0 14 12308.0 15 11178.0 16 10048.0 17 10465.5 18 10883.0 19 11113.5 20 11344.0 21 12910.5 22 14477.0 23 14269.5 24 14062.0 25 17771.0 26 23169.5 27 24859.0 28 31876.0 29 38893.0 30 43396.5 31 47900.0 32 56202.0 33 64504.0 34 74802.0 35 85100.0 36 88887.0 37 92674.0 38 107579.5 39 122485.0 40 152313.5 41 182142.0 42 215747.5 43 249353.0 44 257321.0 45 265289.0 46 258869.0 47 252449.0 48 242780.5 49 233112.0 50 222442.0 51 211772.0 52 194363.5 53 176955.0 54 163843.0 55 150731.0 56 139840.5 57 128950.0 58 121548.0 59 114146.0 60 102729.5 61 91313.0 62 79963.5 63 68614.0 64 58845.5 65 49077.0 66 41366.0 67 33655.0 68 28646.5 69 23638.0 70 18431.0 71 13224.0 72 11905.5 73 10587.0 74 8299.5 75 5158.0 76 4304.0 77 2810.5 78 1317.0 79 998.5 80 680.0 81 442.5 82 205.0 83 172.0 84 139.0 85 95.5 86 52.0 87 39.0 88 26.0 89 21.5 90 17.0 91 17.0 92 17.0 93 12.5 94 8.0 95 5.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2922982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.404908080326358 #Duplication Level Percentage of deduplicated Percentage of total 1 81.10005533549428 13.30438953088165 2 8.953585138551478 2.937654823746263 3 2.833610816493348 1.3945537493997568 4 1.2520470743956102 0.821588686708061 5 0.71052404956399 0.5828040860979252 6 0.4549332605793983 0.4477882993492914 7 0.30771799044519965 0.3533659743541372 8 0.22708235178295144 0.2980212086130923 9 0.18737648538764165 0.2766504617278989 >10 1.639086218391856 5.9944944020584074 >50 0.5761745757262026 6.952398573738868 >100 1.734937172287235 63.35445969747592 >500 0.02014197216957973 2.130532643385613 >1k 0.0025177465211974662 0.6658796510272874 >5k 0.0 0.0 >10k+ 2.0981221009978886E-4 0.4854182114358438 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14103 0.4824867207529845 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4606 0.15757880137476044 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.842327458739055E-5 0.0 0.0 0.03879599669105044 0.0 2 6.842327458739055E-5 0.0 0.0 0.18207433367704626 0.0 3 6.842327458739055E-5 0.0 0.0 0.2726325375934576 0.0 4 6.842327458739055E-5 0.0 0.0 0.49576083602293824 0.0 5 6.842327458739055E-5 0.0 0.0 0.8356876641730945 0.0 6 6.842327458739055E-5 0.0 0.0 1.19727045873016 0.0 7 6.842327458739055E-5 0.0 0.0 1.3714419041923624 0.0 8 6.842327458739055E-5 0.0 0.0 1.7261823712906887 0.0 9 6.842327458739055E-5 0.0 0.0 1.841680858794204 0.0 10 6.842327458739055E-5 0.0 0.0 2.0565983642731975 0.0 11 6.842327458739055E-5 0.0 0.0 2.383627405163631 0.0 12 6.842327458739055E-5 0.0 0.0 2.6338513203297182 0.0 13 6.842327458739055E-5 0.0 0.0 2.7322782008236794 0.0 14 6.842327458739055E-5 0.0 0.0 2.7726821444675336 0.0 15 6.842327458739055E-5 0.0 0.0 2.8373763505899112 0.0 16 6.842327458739055E-5 0.0 0.0 2.9812020737726064 0.0 17 6.842327458739055E-5 0.0 0.0 3.139054568245716 0.0 18 6.842327458739055E-5 0.0 0.0 3.370701564361327 0.0 19 6.842327458739055E-5 0.0 0.0 3.484078930352633 0.0 20 6.842327458739055E-5 0.0 0.0 3.6069671315115865 0.0 21 6.842327458739055E-5 0.0 0.0 3.7659486100153883 0.0 22 6.842327458739055E-5 0.0 0.0 3.9216799829762894 0.0 23 6.842327458739055E-5 0.0 0.0 4.0886669846068155 0.0 24 6.842327458739055E-5 0.0 0.0 4.217644857204047 0.0 25 6.842327458739055E-5 0.0 0.0 4.324453588834964 0.0 26 6.842327458739055E-5 0.0 0.0 4.438686245758612 0.0 27 6.842327458739055E-5 0.0 0.0 4.548779294569724 0.0 28 6.842327458739055E-5 0.0 0.0 4.656614375319451 0.0 29 6.842327458739055E-5 0.0 0.0 4.774986640355637 0.0 30 6.842327458739055E-5 0.0 0.0 4.934036542134026 0.0 31 6.842327458739055E-5 0.0 0.0 5.074270043400883 0.0 32 6.842327458739055E-5 0.0 0.0 5.197329302746305 0.0 33 6.842327458739055E-5 0.0 0.0 5.323364974536278 0.0 34 6.842327458739055E-5 0.0 0.0 5.450050667434832 0.0 35 6.842327458739055E-5 0.0 0.0 5.610811151077906 0.0 36 6.842327458739055E-5 0.0 0.0 5.7432443990418 0.0 37 6.842327458739055E-5 0.0 0.0 5.8873096036855515 0.0 38 6.842327458739055E-5 0.0 0.0 6.028535242433925 0.0 39 6.842327458739055E-5 0.0 0.0 6.222959977173995 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGACG 20 7.0350745E-4 45.000004 2 ACTACGT 20 7.0350745E-4 45.000004 45 CGAATTA 20 7.0350745E-4 45.000004 2 ACGACGT 20 7.0350745E-4 45.000004 27 ATATGCG 45 3.8562575E-10 45.0 1 ATCGTAC 25 3.8922895E-5 45.0 12 ATATCGG 50 2.1827873E-11 45.0 2 CGACTCG 25 3.8922895E-5 45.0 21 AGTCGAC 35 1.212793E-7 45.0 41 TAATCGC 35 1.212793E-7 45.0 24 CCTTACG 60 0.0 44.999996 18 ACACCGT 30 2.1666565E-6 44.999996 10 CGACATA 30 2.1666565E-6 44.999996 18 CGTTAGT 30 2.1666565E-6 44.999996 19 CGAATCG 30 2.1666565E-6 44.999996 45 CGTAAGA 30 2.1666565E-6 44.999996 28 TATCGCC 55 1.8189894E-12 44.999996 33 CGGTCTA 400 0.0 44.4375 31 TCACGAC 410 0.0 43.90244 25 CCCGTAG 75 0.0 42.0 37 >>END_MODULE