SRR1547499_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547499_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	415943
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2253	0.5416607564017185	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	919	0.22094373507908538	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCTCG	25	3.8864975E-5	45.000004	1
TATTGCG	25	3.8864975E-5	45.000004	1
AACGGAT	25	3.8864975E-5	45.000004	25
TCGTCCC	95	0.0	45.000004	38
GCGATAT	50	2.1827873E-11	45.000004	9
CGATACA	25	3.8864975E-5	45.000004	10
TACAACG	25	3.8864975E-5	45.000004	1
TTTAGCG	35	1.2094279E-7	45.0	1
TATCACG	20	7.028091E-4	45.0	1
CGGGTCC	20	7.028091E-4	45.0	6
AGCCGTT	20	7.028091E-4	45.0	45
TACTTAC	20	7.028091E-4	45.0	21
ATAGGCA	20	7.028091E-4	45.0	18
CGAAAGT	20	7.028091E-4	45.0	20
CGACGGT	35	1.2094279E-7	45.0	28
ACGCATG	45	3.8380676E-10	45.0	1
CGTGCGG	40	6.7975634E-9	45.0	2
TTTCGCA	40	6.7975634E-9	45.0	13
ACCGAAC	20	7.028091E-4	45.0	41
TACGGGT	35	1.2094279E-7	45.0	4