##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547497_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2730179 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.501894198145983 31.0 31.0 33.0 30.0 34.0 2 31.934052675667054 31.0 31.0 34.0 30.0 34.0 3 32.03451824953602 33.0 31.0 34.0 30.0 34.0 4 35.76691821305489 37.0 35.0 37.0 35.0 37.0 5 35.7052797637078 37.0 35.0 37.0 33.0 37.0 6 35.75747853895294 37.0 35.0 37.0 33.0 37.0 7 36.062324484951354 37.0 35.0 37.0 35.0 37.0 8 36.06331050088657 37.0 35.0 37.0 35.0 37.0 9 37.937104123942056 39.0 38.0 39.0 35.0 39.0 10 37.35006569166344 39.0 37.0 39.0 34.0 39.0 11 37.03568007811942 39.0 37.0 39.0 33.0 39.0 12 36.487349364272454 39.0 35.0 39.0 33.0 39.0 13 36.249492798823816 39.0 35.0 39.0 32.0 39.0 14 37.30351489774114 40.0 35.0 41.0 32.0 41.0 15 37.464738758887236 40.0 35.0 41.0 32.0 41.0 16 37.560515995471356 40.0 35.0 41.0 33.0 41.0 17 37.47934512718763 39.0 35.0 41.0 33.0 41.0 18 37.40026459803551 39.0 35.0 41.0 32.0 41.0 19 37.36261761591456 39.0 35.0 41.0 32.0 41.0 20 37.21934605752956 39.0 35.0 41.0 32.0 41.0 21 37.092820287607516 39.0 35.0 41.0 32.0 41.0 22 37.017527788471014 39.0 35.0 41.0 32.0 41.0 23 36.9412130120406 39.0 35.0 41.0 32.0 41.0 24 36.80860778725498 38.0 35.0 41.0 31.0 41.0 25 36.67171676289357 38.0 35.0 41.0 31.0 41.0 26 36.62193467900823 38.0 35.0 41.0 31.0 41.0 27 36.55999295284302 38.0 35.0 41.0 31.0 41.0 28 36.53650804580945 38.0 35.0 41.0 31.0 41.0 29 36.49095022707302 38.0 35.0 41.0 31.0 41.0 30 36.45239121683963 38.0 35.0 40.0 30.0 41.0 31 36.38232218473587 38.0 35.0 41.0 30.0 41.0 32 36.25763695347448 38.0 35.0 41.0 30.0 41.0 33 36.16964492071765 38.0 35.0 41.0 30.0 41.0 34 36.07029502461194 38.0 35.0 41.0 30.0 41.0 35 35.913568670772136 38.0 35.0 41.0 29.0 41.0 36 35.768778530638464 38.0 35.0 41.0 29.0 41.0 37 35.715979062178704 38.0 35.0 41.0 28.0 41.0 38 35.54422878499908 38.0 34.0 40.0 27.0 41.0 39 35.458995179436954 38.0 34.0 40.0 27.0 41.0 40 35.273504044972874 38.0 34.0 40.0 26.0 41.0 41 35.19160099026474 38.0 34.0 40.0 26.0 41.0 42 35.160885055522 38.0 34.0 40.0 26.0 41.0 43 35.081003113715255 37.0 34.0 40.0 26.0 41.0 44 34.93673858014438 37.0 34.0 40.0 26.0 41.0 45 34.81767642341399 37.0 34.0 40.0 25.0 41.0 46 34.77483857285548 37.0 34.0 40.0 25.0 41.0 47 34.67448324816798 37.0 34.0 40.0 24.0 41.0 48 34.535374054228676 36.0 34.0 40.0 24.0 41.0 49 34.42729066482454 36.0 33.0 40.0 24.0 41.0 50 34.31519874704186 36.0 33.0 40.0 24.0 41.0 51 33.94201772118238 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 7.0 11 18.0 12 15.0 13 36.0 14 54.0 15 135.0 16 326.0 17 716.0 18 1411.0 19 2671.0 20 4553.0 21 6814.0 22 10209.0 23 14509.0 24 20108.0 25 27752.0 26 36294.0 27 43619.0 28 48488.0 29 55182.0 30 64460.0 31 77511.0 32 95437.0 33 124603.0 34 209859.0 35 314378.0 36 191600.0 37 256041.0 38 395452.0 39 727695.0 40 220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.2351102253735 23.880082587991485 30.03030204246681 12.854505144168202 2 29.767718526880472 25.689634269401385 31.102869079280147 13.439778124437996 3 29.731860072178417 25.979798394171226 30.509977550922486 13.778363982727873 4 25.493786304854005 27.914067172884998 31.120486971733357 15.471659550527638 5 23.616363615718967 32.597093450649204 29.176072338114096 14.61047059551773 6 22.855021593822237 41.66741448088202 25.604768039018687 9.872795886277054 7 90.0673545580711 3.556396851635003 4.9436319010585015 1.4326166892353944 8 90.97202051587094 2.640705975688774 4.855469183522399 1.5318043249178899 9 86.81643218265177 4.629147026623529 6.301747980626911 2.2526728100977995 10 44.65296964045214 28.431176124349356 14.873933174344977 12.04192106085352 11 35.691029782296326 24.10581870272975 22.55910693035145 17.644044584622474 12 33.17255022472885 21.01202888162278 27.48068899511717 18.334731898531196 13 24.80313561858032 28.05892946945969 27.487538362869245 19.650396549090736 14 19.533591020955036 31.64693597013236 30.12538738302507 18.69408562588753 15 18.698261176281846 26.01679230555945 37.24473743296685 18.04020908519185 16 23.447290452384255 22.125399103868283 35.26853001213473 19.158780431612726 17 23.024937192762817 23.279206235195566 26.747733390374773 26.948123181666844 18 24.31488924352579 25.141831359775313 30.444084435489394 20.099194961209506 19 28.310927598520095 25.81112813482193 25.221569721252706 20.656374545405264 20 29.060915053555096 26.470755214218556 25.31801028430737 19.15031944791898 21 26.98782753804787 25.536274361497906 28.487875703387942 18.988022397066274 22 25.626085322610713 22.093496433750314 27.94318614274009 24.337232100898877 23 23.001165857623253 26.571371327667524 27.19711784465414 23.23034497005508 24 22.766822248651096 25.739667618863088 31.43292069860621 20.06058943387961 25 23.35769925708168 25.323357919022893 29.749258198821394 21.569684625074036 26 22.413621963981118 28.671013878577188 25.947529447702877 22.967834709738813 27 21.414236941973403 29.12131402373251 28.69310034250502 20.771348691789076 28 19.769912522219236 27.101959248825807 32.177890167641024 20.95023806131393 29 19.9518053578172 25.82079783047192 32.46175433918436 21.76564247252653 30 21.755313479445853 26.480534792773664 31.472332033906937 20.291819693873553 31 27.51010098605256 25.374673235710922 26.194143314412717 20.9210824638238 32 27.808799349786224 25.801055535186524 26.57554687806184 19.814598236965413 33 25.28383670081705 24.95283276298001 27.185763277792407 22.57756725841053 34 21.641181768667916 26.2864449547081 28.7986611866841 23.27371208993989 35 22.8658267461584 26.311534884709026 28.69060966332244 22.132028705810132 36 27.487281969423982 25.00766433263167 26.76601058025866 20.73904311768569 37 23.106433680722034 27.92520197393651 27.909781739585572 21.058582605755884 38 23.65570169574962 29.26672573483277 24.67695341587493 22.40061915354268 39 21.746303081226543 28.298327692067076 26.238169731728213 23.717199494978168 40 24.670323813933077 25.33929094026436 26.732679432374212 23.257705813428352 41 21.764030856584863 24.390561937513986 27.92670370697306 25.918703498928092 42 23.082589090312393 26.505002052978945 25.873981156546876 24.538427700161787 43 22.61822393330254 25.310758012569874 27.31513208474609 24.755885969381495 44 22.03485559005472 26.847140791867492 28.54450202715646 22.573501590921328 45 21.34413164851096 29.304085922571378 25.53535867062196 23.816423758295702 46 23.66471209396893 27.06020374488266 27.070166461612956 22.20491769953545 47 23.65925457634829 26.65561488825458 26.805202149749157 22.879928385647975 48 23.329862254452912 26.310985470183457 27.841104923889603 22.518047351474024 49 22.670088664516136 25.300648785299423 29.16563346212831 22.863629088056133 50 22.065366410041246 27.93249087330904 27.975857993193852 22.02628472345586 51 22.04672294380698 28.87470015702267 26.355085142769024 22.72349175640132 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2160.0 1 3722.0 2 5284.0 3 12081.5 4 18879.0 5 14129.5 6 9380.0 7 9266.5 8 9153.0 9 9165.0 10 9177.0 11 9016.0 12 8855.0 13 8605.5 14 8356.0 15 8355.5 16 8355.0 17 8260.0 18 8165.0 19 7890.5 20 7616.0 21 8386.5 22 9157.0 23 10547.0 24 11937.0 25 12666.0 26 18307.5 27 23220.0 28 28057.0 29 32894.0 30 38957.5 31 45021.0 32 49050.0 33 53079.0 34 63219.5 35 73360.0 36 76603.5 37 79847.0 38 92460.0 39 105073.0 40 126428.0 41 147783.0 42 168442.5 43 189102.0 44 195359.5 45 201617.0 46 202887.0 47 204157.0 48 201514.5 49 198872.0 50 201281.0 51 203690.0 52 192855.0 53 182020.0 54 175932.0 55 169844.0 56 165879.5 57 161915.0 58 147706.5 59 133498.0 60 123881.5 61 114265.0 62 101213.5 63 88162.0 64 78737.0 65 69312.0 66 55140.0 67 40968.0 68 36376.5 69 31785.0 70 26228.0 71 20671.0 72 16854.5 73 13038.0 74 10531.0 75 6154.0 76 4284.0 77 3205.0 78 2126.0 79 1777.5 80 1429.0 81 1050.0 82 671.0 83 497.5 84 324.0 85 219.0 86 114.0 87 82.0 88 50.0 89 40.5 90 31.0 91 29.0 92 27.0 93 25.5 94 24.0 95 16.5 96 9.0 97 5.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2730179.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.145930006321645 #Duplication Level Percentage of deduplicated Percentage of total 1 82.96642418942362 14.225365020266487 2 7.113904924057933 2.4394903179904843 3 2.0010847158831715 1.029313754257587 4 0.9393456726311037 0.6442382061869613 5 0.5667680374740413 0.48588825501750976 6 0.39183509429870755 0.40310262605196484 7 0.2993194205715508 0.3592476884256793 8 0.23067658333119828 0.31641316415153187 9 0.18615503417451454 0.28726210676525765 >10 2.2645347118227797 9.46221568574093 >50 1.2305290902732133 15.598509067436522 >100 1.801479871779293 53.159684559874464 >500 0.005366658296549 0.5989896158192809 >1k 0.00236132965048156 0.6267049396924478 >5k 2.1466633186196003E-4 0.36357499232289886 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9878 0.36180777890387406 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.098829051135475E-4 0.0 0.0 0.016995222657562013 0.0 2 1.098829051135475E-4 0.0 0.0 0.05541761181226579 0.0 3 1.098829051135475E-4 0.0 0.0 0.08116683924387376 0.0 4 1.098829051135475E-4 0.0 0.0 0.16519063402069975 0.0 5 1.098829051135475E-4 0.0 0.0 0.29488908968972366 0.0 6 1.098829051135475E-4 0.0 0.0 0.4413996298411203 0.0 7 1.098829051135475E-4 0.0 0.0 0.5159002395081055 0.0 8 1.098829051135475E-4 0.0 0.0 0.6979395856462158 0.0 9 1.098829051135475E-4 0.0 0.0 0.7503171037503402 0.0 10 1.098829051135475E-4 0.0 0.0 0.8484059103817002 0.0 11 1.098829051135475E-4 0.0 0.0 0.9806683005033736 0.0 12 1.098829051135475E-4 0.0 0.0 1.091576779397981 0.0 13 1.098829051135475E-4 0.0 0.0 1.1334055386112045 0.0 14 1.098829051135475E-4 0.0 0.0 1.1487891453271013 0.0 15 1.098829051135475E-4 0.0 0.0 1.173146522627271 0.0 16 1.098829051135475E-4 0.0 0.0 1.232629801928738 0.0 17 1.098829051135475E-4 0.0 0.0 1.3131007161068926 0.0 18 1.098829051135475E-4 0.0 0.0 1.4156580942128703 0.0 19 1.098829051135475E-4 0.0 0.0 1.4734931299376341 3.662763503784917E-5 20 1.098829051135475E-4 0.0 0.0 1.5401920533415574 3.662763503784917E-5 21 1.098829051135475E-4 0.0 0.0 1.6279152392572063 3.662763503784917E-5 22 1.098829051135475E-4 0.0 0.0 1.7252714931878093 3.662763503784917E-5 23 1.098829051135475E-4 0.0 0.0 1.8213457798920876 3.662763503784917E-5 24 1.098829051135475E-4 0.0 0.0 1.8956998790189215 3.662763503784917E-5 25 1.098829051135475E-4 0.0 0.0 1.9585162731088328 3.662763503784917E-5 26 1.098829051135475E-4 0.0 0.0 2.02038034868776 3.662763503784917E-5 27 1.098829051135475E-4 0.0 0.0 2.089057164383727 3.662763503784917E-5 28 1.4651054015139668E-4 0.0 0.0 2.1661217085033617 3.662763503784917E-5 29 1.4651054015139668E-4 0.0 0.0 2.256848360492114 3.662763503784917E-5 30 1.4651054015139668E-4 0.0 0.0 2.3614935137952493 3.662763503784917E-5 31 1.4651054015139668E-4 0.0 0.0 2.4510114538277525 3.662763503784917E-5 32 1.4651054015139668E-4 0.0 0.0 2.5411154360208617 3.662763503784917E-5 33 1.4651054015139668E-4 0.0 0.0 2.6274467718050722 3.662763503784917E-5 34 1.4651054015139668E-4 0.0 0.0 2.7230082716188204 3.662763503784917E-5 35 1.4651054015139668E-4 0.0 0.0 2.8371399823967587 3.662763503784917E-5 36 1.4651054015139668E-4 0.0 0.0 2.9320788124148636 3.662763503784917E-5 37 1.4651054015139668E-4 0.0 0.0 3.0331344574842896 3.662763503784917E-5 38 1.4651054015139668E-4 0.0 0.0 3.165543358146114 3.662763503784917E-5 39 1.4651054015139668E-4 0.0 0.0 3.4258193327250703 3.662763503784917E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 20 7.0349936E-4 45.0 38 CCGCGTA 20 7.0349936E-4 45.0 38 ACGTACT 40 6.8212103E-9 45.0 11 TCGTTAG 150 0.0 42.0 1 TCGATAG 140 0.0 40.17857 1 CTTAACG 90 0.0 40.000004 1 CGTAAGG 430 0.0 39.76744 2 TACGCGG 200 0.0 39.375 2 ATCGACC 40 3.4605546E-7 39.375 22 CGGTCTA 370 0.0 38.918922 31 ACCGTTC 510 0.0 38.82353 45 GACCGAT 1180 0.0 38.707626 9 TATCGGC 35 6.251448E-6 38.571426 22 TATCGCC 35 6.251448E-6 38.571426 41 TAGGGTA 1385 0.0 38.33935 5 GGTACCT 1985 0.0 38.312344 8 AGGGTAC 1610 0.0 38.291924 6 TATGGGA 2495 0.0 38.236473 4 GTAGGGC 1055 0.0 38.175358 4 CTACGGG 710 0.0 38.02817 3 >>END_MODULE