##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547496_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3398968 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52789758538474 31.0 31.0 33.0 30.0 34.0 2 31.968823183978195 31.0 31.0 34.0 30.0 34.0 3 32.05700200766821 33.0 31.0 34.0 30.0 34.0 4 35.793869492151735 37.0 35.0 37.0 35.0 37.0 5 35.73321961254122 37.0 35.0 37.0 33.0 37.0 6 35.789108046913064 37.0 35.0 37.0 35.0 37.0 7 36.088062317738796 37.0 35.0 37.0 35.0 37.0 8 36.09218533390135 37.0 35.0 37.0 35.0 37.0 9 37.95407664914762 39.0 38.0 39.0 35.0 39.0 10 37.3803454460295 39.0 37.0 39.0 35.0 39.0 11 37.05244356522333 39.0 37.0 39.0 33.0 39.0 12 36.61129995928176 39.0 35.0 39.0 33.0 39.0 13 36.43842719319511 39.0 35.0 39.0 32.0 39.0 14 37.58100046837746 40.0 36.0 41.0 33.0 41.0 15 37.69992980222232 40.0 36.0 41.0 33.0 41.0 16 37.7433668101612 40.0 35.0 41.0 33.0 41.0 17 37.65012291966267 40.0 35.0 41.0 33.0 41.0 18 37.5572756201294 39.0 36.0 41.0 33.0 41.0 19 37.52819473440174 39.0 36.0 41.0 32.0 41.0 20 37.398132609662696 39.0 35.0 41.0 32.0 41.0 21 37.28868997884064 39.0 35.0 41.0 32.0 41.0 22 37.21332004302482 39.0 35.0 41.0 32.0 41.0 23 37.12189582249671 39.0 35.0 41.0 32.0 41.0 24 37.01366856057486 39.0 35.0 41.0 32.0 41.0 25 36.87085050521217 39.0 35.0 41.0 31.0 41.0 26 36.85484447043926 39.0 35.0 41.0 31.0 41.0 27 36.80673869245018 39.0 35.0 41.0 31.0 41.0 28 36.777220320991546 39.0 35.0 41.0 31.0 41.0 29 36.72071493465075 39.0 35.0 41.0 31.0 41.0 30 36.658687283904996 39.0 35.0 41.0 31.0 41.0 31 36.61146236151679 39.0 35.0 41.0 31.0 41.0 32 36.511552330001344 39.0 35.0 41.0 30.0 41.0 33 36.43164248677834 39.0 35.0 41.0 30.0 41.0 34 36.302569780003815 39.0 35.0 41.0 30.0 41.0 35 36.131503150368 38.0 35.0 41.0 30.0 41.0 36 36.027229147199975 38.0 35.0 41.0 29.0 41.0 37 35.983880107138404 38.0 35.0 41.0 29.0 41.0 38 35.842686956746874 38.0 35.0 41.0 29.0 41.0 39 35.75572173671538 38.0 35.0 41.0 28.0 41.0 40 35.594696684405385 38.0 35.0 40.0 27.0 41.0 41 35.52807205010462 38.0 35.0 40.0 27.0 41.0 42 35.49355216053814 38.0 34.0 40.0 27.0 41.0 43 35.38225514332586 38.0 34.0 40.0 27.0 41.0 44 35.23159970908817 38.0 34.0 40.0 26.0 41.0 45 35.11614996081163 38.0 34.0 40.0 26.0 41.0 46 35.04648293246656 37.0 34.0 40.0 26.0 41.0 47 34.95884750900861 37.0 34.0 40.0 26.0 41.0 48 34.81998330081366 37.0 34.0 40.0 25.0 41.0 49 34.69943553455049 37.0 34.0 40.0 24.0 41.0 50 34.61333322349607 37.0 34.0 40.0 24.0 41.0 51 34.224786170390544 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 9.0 11 9.0 12 16.0 13 34.0 14 61.0 15 128.0 16 299.0 17 684.0 18 1434.0 19 2698.0 20 4623.0 21 7324.0 22 10947.0 23 15888.0 24 22472.0 25 31900.0 26 41902.0 27 50101.0 28 56686.0 29 65210.0 30 76082.0 31 92100.0 32 115774.0 33 148850.0 34 249142.0 35 357382.0 36 243578.0 37 325207.0 38 512160.0 39 965968.0 40 295.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.56420772422688 23.992811935858178 29.964948184272405 13.478032155642536 2 30.49140209616566 26.108101047141368 29.781363049019582 13.61913380767339 3 29.514223140670932 25.46372899068188 31.05245474508733 13.969593123559857 4 25.7039489633324 27.5357402599848 31.049689199780637 15.710621576902165 5 23.11045587954932 32.39018431476848 29.955533561951746 14.54382624373045 6 22.117683955836007 41.78653638398478 25.859702121349777 10.236077538829432 7 90.46525298267002 3.1147689533999734 4.954856885972448 1.4651211779575448 8 91.44022538605836 2.398669243134975 4.767888370823144 1.3932169999835244 9 86.91208625676971 4.812107675035481 5.995496280047355 2.2803097881474614 10 42.613081382348994 32.83199488786008 12.897473586100253 11.657450143690673 11 33.04611870426553 23.633585252935596 25.247133835917257 18.07316220688162 12 31.415417856243426 21.274781051189656 28.236688312452486 19.073112780114435 13 23.79119191472235 26.91616984920129 28.993300319391064 20.2993379166853 14 19.605274306789592 30.3021387668257 29.610605336678663 20.481981589706052 15 19.11459595971483 26.536554624815533 35.340638687978235 19.008210727491402 16 22.494092324493785 24.25495032609898 33.75156812303028 19.499389226376948 17 22.644020184950257 23.03349134207795 28.22989213196476 26.092596341007035 18 24.22741255581106 25.18502674929567 30.291253109767435 20.296307585125838 19 26.847972678766023 26.525433602199257 26.280153270051382 20.346440448983337 20 27.98349381341631 25.353901537172458 27.511674131677616 19.15093051773362 21 26.759857697983623 25.286204518547983 29.116425926928407 18.837511856539983 22 26.11527969666087 22.45831675967529 28.785001800546517 22.641401743117324 23 23.326933351534937 26.500161225407243 28.11382749116791 22.059077931889913 24 22.141308773721907 26.122958497991156 32.223074768576815 19.512657959710122 25 21.94068905620765 26.533288927698056 30.07203951316988 21.45398250292442 26 21.502614911349564 28.881030948217223 26.817610521781905 22.798743618651308 27 20.49272014329055 28.178994330043704 30.176747765792438 21.1515377608733 28 19.156991180852543 26.779157673740972 33.042411696726774 21.021439448679715 29 20.1898046701234 25.568819712336214 32.71893115792794 21.522444459612448 30 21.65166015096347 26.080886904495713 31.219240663636725 21.048212280904085 31 25.276701634143066 26.107571474635833 27.61188101800311 21.003845873217987 32 25.701183418025707 25.774440947958322 27.928712479787983 20.59566315422799 33 24.906471611383218 25.544577059860522 27.820826792132202 21.72812453662406 34 21.437448072473764 26.048641823047465 29.31325037481965 23.20065972965912 35 21.643540039211903 25.901656032066207 29.43343391288179 23.021370015840102 36 25.514126640792146 26.406132684979678 27.29134254867948 20.788398125548696 37 22.412567579335846 27.844892920439378 28.46478695886516 21.27775254135961 38 22.821191608747128 28.791503774086724 26.70548825408183 21.681816363084323 39 22.359316121834627 28.11703434689588 26.872833165831512 22.650816365437983 40 23.525287675553287 25.870911406050308 27.424559454516782 23.179241463879624 41 21.438213010537314 25.121742834883996 29.01542468184461 24.424619472734076 42 23.01533877341593 25.499239769247605 27.117819291031864 24.367602166304597 43 21.948868009348722 26.35579387625891 27.704497365082574 23.99084074930979 44 21.344360994278265 27.04067822939198 28.72613099034766 22.888829785982097 45 21.782758766778624 28.74681373875835 26.36968044418188 23.100747050281146 46 22.486590047332015 27.486019285853825 27.716295063678153 22.31109560313601 47 22.30229881540515 26.339612494145282 28.578380261302843 22.77970842914673 48 22.618836070242498 26.584274991703367 29.226782952943363 21.570105985110775 49 22.411155385987747 25.740430624824945 29.394274968166805 22.4541390210205 50 21.693878847932666 27.580871605734448 29.103598504016514 21.621651042316373 51 20.938414248089423 27.850806480084543 28.089731942165976 23.121047329660062 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3485.0 1 4629.5 2 5774.0 3 15431.5 4 25089.0 5 18073.0 6 11057.0 7 10897.0 8 10737.0 9 10953.5 10 11170.0 11 11422.0 12 11674.0 13 11444.5 14 11215.0 15 11108.5 16 11002.0 17 10680.0 18 10358.0 19 11473.5 20 12589.0 21 12277.5 22 11966.0 23 13997.5 24 16029.0 25 20739.0 26 30608.5 27 35768.0 28 41111.0 29 46454.0 30 55651.0 31 64848.0 32 69378.5 33 73909.0 34 86581.0 35 99253.0 36 107387.5 37 115522.0 38 130803.0 39 146084.0 40 170616.5 41 195149.0 42 217002.0 43 238855.0 44 237409.5 45 235964.0 46 240964.5 47 245965.0 48 248797.5 49 251630.0 50 251734.0 51 251838.0 52 236085.5 53 220333.0 54 204861.0 55 189389.0 56 183855.5 57 178322.0 58 172544.0 59 166766.0 60 151163.0 61 135560.0 62 122230.0 63 108900.0 64 95047.0 65 81194.0 66 66620.5 67 52047.0 68 43629.0 69 35211.0 70 28135.0 71 21059.0 72 17286.0 73 13513.0 74 11053.0 75 6685.0 76 4777.0 77 3492.0 78 2207.0 79 1628.0 80 1049.0 81 880.0 82 711.0 83 467.5 84 224.0 85 173.5 86 123.0 87 106.5 88 90.0 89 64.0 90 38.0 91 26.5 92 15.0 93 10.5 94 6.0 95 5.0 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3398968.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.35530791003208 #Duplication Level Percentage of deduplicated Percentage of total 1 82.31315940506396 14.285702265224378 2 7.0269213340873025 2.4390876682531704 3 2.0638233629692437 1.0745486980874737 4 0.9925131254105201 0.6890148358499144 5 0.588183453502604 0.5104052471561865 6 0.38370871519899763 0.3995629740024846 7 0.31227912377610206 0.37937902429064896 8 0.23002360375728492 0.3193704375826313 9 0.19638697148269277 0.306752072364074 >10 2.672988132978913 11.74947937997678 >50 1.480052911734581 18.866379517738075 >100 1.7317670133464005 47.129426910047926 >500 0.005461897794403954 0.6425478700717716 >1k 0.0025602645911268537 0.7908691639470821 >5k 0.0 0.0 >10k+ 1.7068430607512357E-4 0.4174739354073798 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14093 0.4146258511406992 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3705 0.10900367405636063 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.88413895041083E-5 0.0 0.0 0.016946320177183193 0.0 2 5.88413895041083E-5 0.0 0.0 0.06684381847666704 0.0 3 5.88413895041083E-5 0.0 0.0 0.093440126532524 0.0 4 5.88413895041083E-5 0.0 0.0 0.14925118447717073 0.0 5 5.88413895041083E-5 0.0 0.0 0.26872862586526264 0.0 6 5.88413895041083E-5 0.0 0.0 0.4113307333284691 0.0 7 5.88413895041083E-5 0.0 0.0 0.4871772843992647 0.0 8 5.88413895041083E-5 0.0 0.0 0.6650253841754321 0.0 9 5.88413895041083E-5 0.0 0.0 0.739400900508625 0.0 10 5.88413895041083E-5 0.0 0.0 0.8922708304402983 0.0 11 5.88413895041083E-5 0.0 0.0 1.0976272798096363 0.0 12 5.88413895041083E-5 0.0 0.0 1.2613828667995697 0.0 13 5.88413895041083E-5 0.0 0.0 1.329462354455823 0.0 14 8.826208425616246E-5 0.0 0.0 1.3559409797326718 0.0 15 8.826208425616246E-5 0.0 0.0 1.394040779436582 0.0 16 8.826208425616246E-5 0.0 0.0 1.4798609460283239 0.0 17 8.826208425616246E-5 0.0 0.0 1.5820978602917122 0.0 18 8.826208425616246E-5 0.0 0.0 1.7133141588858736 0.0 19 8.826208425616246E-5 0.0 0.0 1.7856008058916706 0.0 20 8.826208425616246E-5 0.0 0.0 1.8680670132816783 0.0 21 8.826208425616246E-5 0.0 0.0 1.9685975272494476 0.0 22 8.826208425616246E-5 0.0 0.0 2.0811611053708066 0.0 23 8.826208425616246E-5 0.0 0.0 2.1990204085475358 0.0 24 8.826208425616246E-5 0.0 0.0 2.2869588651614254 0.0 25 8.826208425616246E-5 0.0 0.0 2.363776299159039 0.0 26 8.826208425616246E-5 0.0 0.0 2.4358864219963237 0.0 27 8.826208425616246E-5 0.0 0.0 2.5135276354469944 0.0 28 8.826208425616246E-5 0.0 0.0 2.59696472576382 0.0 29 8.826208425616246E-5 0.0 0.0 2.6910815282756415 0.0 30 8.826208425616246E-5 0.0 0.0 2.7982905399521267 0.0 31 8.826208425616246E-5 0.0 0.0 2.891554142316138 0.0 32 8.826208425616246E-5 0.0 0.0 2.9834349720268034 0.0 33 8.826208425616246E-5 0.0 0.0 3.0819354580566807 0.0 34 8.826208425616246E-5 0.0 0.0 3.1800828957495333 0.0 35 8.826208425616246E-5 0.0 0.0 3.301001951180476 0.0 36 8.826208425616246E-5 0.0 0.0 3.4070635557616313 0.0 37 8.826208425616246E-5 0.0 0.0 3.5148315606384055 0.0 38 8.826208425616246E-5 0.0 0.0 3.6375452784492235 0.0 39 8.826208425616246E-5 0.0 0.0 3.8036545210193213 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 25 3.8924234E-5 45.0 20 TACGTTG 110 0.0 40.909092 1 CGGGATA 820 0.0 40.609756 6 CGGTCTA 485 0.0 39.432987 31 CGTTTTT 7960 0.0 39.064068 1 TAGGGAT 4970 0.0 38.797783 5 TAGGGTA 1720 0.0 38.328487 5 ATAGGGA 4695 0.0 38.242813 4 CGTTAGG 395 0.0 38.164555 2 ACGGGTA 360 0.0 38.125 5 CTATGCG 160 0.0 37.96875 1 GGGCGAT 5025 0.0 37.925373 7 ACGGGAT 1425 0.0 37.736843 5 GGCGATT 1540 0.0 37.548702 8 ATAGGGC 1630 0.0 37.546013 4 TACGGGA 1135 0.0 37.466965 4 CGTAAGG 445 0.0 37.415733 2 ATAACGC 310 0.0 37.016132 11 CGAGGGA 2335 0.0 36.90578 4 CGCATCG 245 0.0 36.734695 21 >>END_MODULE