##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547495_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1003144 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.543387589418867 31.0 31.0 33.0 30.0 34.0 2 31.97784465640028 31.0 31.0 34.0 30.0 34.0 3 32.068899380348185 33.0 31.0 34.0 30.0 34.0 4 35.796863660650914 37.0 35.0 37.0 35.0 37.0 5 35.74008716595025 37.0 35.0 37.0 35.0 37.0 6 35.79780470201686 37.0 35.0 37.0 35.0 37.0 7 36.09066594626494 37.0 35.0 37.0 35.0 37.0 8 36.08651599371576 37.0 35.0 37.0 35.0 37.0 9 37.94502484189707 39.0 38.0 39.0 35.0 39.0 10 37.40905194069845 39.0 37.0 39.0 35.0 39.0 11 37.081634341629915 39.0 37.0 39.0 33.0 39.0 12 36.53458825452776 39.0 35.0 39.0 33.0 39.0 13 36.31145279242063 39.0 35.0 39.0 32.0 39.0 14 37.43133388626159 40.0 35.0 41.0 33.0 41.0 15 37.56130126881086 40.0 35.0 41.0 33.0 41.0 16 37.65034232373418 40.0 35.0 41.0 33.0 41.0 17 37.57765784373928 39.0 35.0 41.0 33.0 41.0 18 37.4736169483145 39.0 35.0 41.0 33.0 41.0 19 37.45513106792245 39.0 35.0 41.0 32.0 41.0 20 37.33341175344716 39.0 35.0 41.0 32.0 41.0 21 37.17582520555374 39.0 35.0 41.0 32.0 41.0 22 37.11419895847455 39.0 35.0 41.0 32.0 41.0 23 37.02595240563668 39.0 35.0 41.0 32.0 41.0 24 36.90018581579514 39.0 35.0 41.0 31.0 41.0 25 36.78863054556474 38.0 35.0 41.0 31.0 41.0 26 36.75566120118348 38.0 35.0 41.0 31.0 41.0 27 36.714212515850164 38.0 35.0 41.0 31.0 41.0 28 36.70144665172697 38.0 35.0 41.0 31.0 41.0 29 36.660050800283905 38.0 35.0 41.0 31.0 41.0 30 36.61212049316948 38.0 35.0 41.0 31.0 41.0 31 36.56535153477467 38.0 35.0 41.0 31.0 41.0 32 36.43638301181087 38.0 35.0 41.0 30.0 41.0 33 36.38190828036653 38.0 35.0 41.0 30.0 41.0 34 36.26625190401378 38.0 35.0 41.0 30.0 41.0 35 36.128846905329645 38.0 35.0 41.0 30.0 41.0 36 35.993305048926175 38.0 35.0 41.0 30.0 41.0 37 35.95026735942198 38.0 35.0 41.0 30.0 41.0 38 35.82992172609316 38.0 35.0 41.0 29.0 41.0 39 35.75421973315895 38.0 35.0 40.0 29.0 41.0 40 35.59088525675277 38.0 35.0 40.0 28.0 41.0 41 35.56180368920115 38.0 35.0 40.0 28.0 41.0 42 35.51038335473272 38.0 34.0 40.0 28.0 41.0 43 35.4103548443693 38.0 34.0 40.0 27.0 41.0 44 35.281745193112855 38.0 34.0 40.0 27.0 41.0 45 35.17331509733398 37.0 34.0 40.0 27.0 41.0 46 35.12303418053639 37.0 34.0 40.0 27.0 41.0 47 35.041641080443085 37.0 34.0 40.0 27.0 41.0 48 34.92181880168749 37.0 34.0 40.0 26.0 41.0 49 34.80064776343177 37.0 34.0 40.0 26.0 41.0 50 34.70148253889771 36.0 34.0 40.0 26.0 41.0 51 34.306265102517685 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 5.0 12 3.0 13 11.0 14 25.0 15 46.0 16 95.0 17 193.0 18 399.0 19 723.0 20 1299.0 21 2039.0 22 3121.0 23 4463.0 24 6413.0 25 8943.0 26 11818.0 27 14383.0 28 16322.0 29 18729.0 30 22450.0 31 27063.0 32 33984.0 33 44533.0 34 76728.0 35 120177.0 36 71444.0 37 93553.0 38 145405.0 39 278702.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.6661536130406 23.872445032816824 29.328690596763774 13.132710757378801 2 30.829571826178494 25.838463869593998 30.040353129760035 13.291611174467475 3 29.85752793218122 25.419580837845814 30.490238689560023 14.232652540412941 4 26.423325065992522 26.9402000111649 30.452756533458807 16.183718389383777 5 23.397737513258317 32.65144386050258 28.757287089390953 15.193531536848148 6 22.309957493639995 41.53471485649119 26.112402606206086 10.042925043662725 7 89.80814319778617 3.27799398690517 5.184798991969249 1.7290638233394207 8 90.15395596245405 2.8787492124759755 5.171939422455799 1.7953554026141811 9 85.72547909372932 4.972865311460768 6.742401888462673 2.5592537063472443 10 44.96253778121586 30.89277312130661 12.823482969543754 11.321206127933776 11 36.1790530571882 22.73103363026644 24.068628232835966 17.021285079709394 12 32.93246034467634 21.947895815555892 27.385001555110733 17.73464228465704 13 23.90544129257614 30.10136132000989 27.193403938018868 18.799793449395104 14 19.327135486031917 33.09046358249663 28.71591715646009 18.866483775011364 15 17.843400349301795 26.335002751349755 38.16042362811321 17.661173271235235 16 21.237130461828013 23.67745807182219 35.972004019363126 19.113407446986674 17 21.222775593533928 22.65686681074701 27.980429529559064 28.139928066159992 18 23.095288413228808 24.97119057682646 31.154450407917505 20.77907060202723 19 27.141666600208943 26.04003014522342 26.066447090347943 20.751856164219692 20 28.663083266211032 24.89782124999003 26.5801320647883 19.85896341901063 21 25.975931670826917 25.712759085435394 29.197104304068013 19.11420493966968 22 25.909540404966787 23.031289625417685 27.461062419752295 23.59810754986323 23 22.343850932667692 28.170731221041045 27.27743972949048 22.207978116800778 24 21.04782563619979 25.866376113499157 33.372975365451026 19.71282288485003 25 20.783556498369126 26.772826234319304 30.942815787165152 21.50080148014642 26 20.803194755688118 30.06796631390907 26.808713405054508 22.320125525348306 27 20.709688738605823 29.587875718740282 29.51301109312322 20.189424449530676 28 18.618662923767673 27.475417288046383 34.017150080148014 19.88876970803793 29 20.073488950738877 25.70099606836107 32.84872361296085 21.376791367939198 30 20.55936136785945 27.374036030719417 31.03442775912531 21.032174842295824 31 26.608542741620344 26.06973674766534 26.49958530380484 20.822135206909476 32 26.06096432815229 26.381955133061652 27.623551553914496 19.93352898487156 33 24.6003564792293 26.251864139146523 27.8529303868637 21.294848994760475 34 20.94993340936097 26.498787811121833 29.141778249184565 23.409500530332632 35 21.971521536289902 25.948916606190135 29.931495378529902 22.148066478990057 36 27.08982957581364 25.85939805252287 27.208755672166706 19.84201669949678 37 21.697283739921687 28.619918974743406 28.964734873557536 20.71806241177737 38 22.316337435104032 30.05351175902961 25.908643225698402 21.721507580167952 39 21.9282575582369 28.16554751860152 27.743873262462813 22.162321660698765 40 24.019682119416554 26.284162592808215 27.613582895376936 22.0825723923983 41 20.998082030097372 24.485716906047386 29.19840022967789 25.317800834177344 42 22.731631749778696 25.944031963506735 26.861048862376684 24.46328742433788 43 22.584394663178966 26.078608853763768 27.447804103897344 23.889192379159923 44 20.75534519470784 28.049412646638967 28.903726683307678 22.291515475345513 45 20.411526161747464 30.484556554193613 26.032753024491 23.07116425956792 46 22.510925649757162 28.62899045401258 27.06301388434761 21.797070011882642 47 22.35970109974241 26.805722807493243 28.272610911294887 22.56196518146946 48 23.15071415469763 25.866475800084533 29.43794709433541 21.544862950882425 49 21.968630625314013 25.210936814654726 30.307911924908087 22.512520635123174 50 20.68317210689592 28.850494046717124 28.589614252789232 21.87671959359773 51 20.203181198312507 29.217041621143125 27.49595272463375 23.083824455910616 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 860.0 1 1268.5 2 1677.0 3 4093.0 4 6509.0 5 4902.0 6 3295.0 7 3180.0 8 3065.0 9 3095.0 10 3125.0 11 3125.0 12 3125.0 13 3054.0 14 2983.0 15 3058.5 16 3134.0 17 3099.5 18 3065.0 19 3102.0 20 3139.0 21 3325.5 22 3512.0 23 4228.5 24 4945.0 25 5807.0 26 8313.5 27 9958.0 28 12339.5 29 14721.0 30 17099.0 31 19477.0 32 20574.5 33 21672.0 34 25879.0 35 30086.0 36 32058.5 37 34031.0 38 38852.0 39 43673.0 40 51705.0 41 59737.0 42 68457.0 43 77177.0 44 79164.5 45 81152.0 46 80890.0 47 80628.0 48 79363.0 49 78098.0 50 73877.0 51 69656.0 52 66291.0 53 62926.0 54 57354.0 55 51782.0 56 50529.5 57 49277.0 58 46014.5 59 42752.0 60 39758.0 61 36764.0 62 32943.0 63 29122.0 64 24274.5 65 19427.0 66 17439.0 67 15451.0 68 12851.0 69 10251.0 70 8333.0 71 6415.0 72 5181.5 73 3948.0 74 3376.5 75 2134.5 76 1464.0 77 1156.5 78 849.0 79 561.5 80 274.0 81 276.0 82 278.0 83 192.0 84 106.0 85 72.0 86 38.0 87 26.5 88 15.0 89 13.0 90 11.0 91 10.0 92 9.0 93 7.0 94 5.0 95 4.5 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1003144.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.78629753753116 #Duplication Level Percentage of deduplicated Percentage of total 1 80.331374219083 15.894604718975359 2 5.367581500627376 2.124091292567225 3 1.6962314139546546 1.0068641834704195 4 0.94706624056657 0.7495573769440487 5 0.6378073250345103 0.6309922752374832 6 0.5097217532836675 0.6051303763093618 7 0.43674031478493885 0.6049031670478874 8 0.3718389689687306 0.5885853180851296 9 0.33549796905661955 0.5974436375092527 >10 6.50199069026899 33.524336921480106 >50 2.5272802221801856 34.60955200269431 >100 0.3338299591935372 8.35961165400257 >500 0.002532852497674789 0.3537171268056913 >1k 5.065704995349578E-4 0.3506099488711556 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3498 0.34870367564377597 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.968658537557918E-5 0.0 0.0 0.028610050002791224 0.0 2 9.968658537557918E-5 0.0 0.0 0.09490162927755137 0.0 3 9.968658537557918E-5 0.0 0.0 0.13338065123252493 0.0 4 9.968658537557918E-5 0.0 0.0 0.24343464148716434 0.0 5 9.968658537557918E-5 0.0 0.0 0.424963913456094 0.0 6 9.968658537557918E-5 0.0 0.0 0.6184555756700932 0.0 7 9.968658537557918E-5 0.0 0.0 0.7120612793377621 0.0 8 9.968658537557918E-5 0.0 0.0 0.9358576635059374 0.0 9 9.968658537557918E-5 0.0 0.0 0.9976633464387964 0.0 10 9.968658537557918E-5 0.0 0.0 1.1226703244997727 0.0 11 9.968658537557918E-5 0.0 0.0 1.2957262367117781 0.0 12 9.968658537557918E-5 0.0 0.0 1.442664263555382 0.0 13 9.968658537557918E-5 0.0 0.0 1.4952987806336877 0.0 14 9.968658537557918E-5 0.0 0.0 1.5140398586842965 0.0 15 9.968658537557918E-5 0.0 0.0 1.5477339245412423 0.0 16 9.968658537557918E-5 0.0 0.0 1.6275828794270812 0.0 17 9.968658537557918E-5 0.0 0.0 1.7220857623631303 0.0 18 9.968658537557918E-5 0.0 0.0 1.8473918001802334 0.0 19 9.968658537557918E-5 0.0 0.0 1.9152783648210028 0.0 20 9.968658537557918E-5 0.0 0.0 1.9893454977550582 0.0 21 9.968658537557918E-5 0.0 0.0 2.0866396050816234 0.0 22 9.968658537557918E-5 0.0 0.0 2.1979895209461455 0.0 23 9.968658537557918E-5 0.0 0.0 2.315619691689329 0.0 24 9.968658537557918E-5 0.0 0.0 2.4010510953562 0.0 25 9.968658537557918E-5 0.0 0.0 2.478009139266147 0.0 26 9.968658537557918E-5 0.0 0.0 2.554867496590719 0.0 27 9.968658537557918E-5 0.0 0.0 2.6352148844034358 0.0 28 9.968658537557918E-5 0.0 0.0 2.7129704209963874 0.0 29 9.968658537557918E-5 0.0 0.0 2.8003955563707703 0.0 30 9.968658537557918E-5 0.0 0.0 2.908057068576396 0.0 31 9.968658537557918E-5 0.0 0.0 3.0026596380978203 0.0 32 9.968658537557918E-5 0.0 0.0 3.1002528051805123 0.0 33 9.968658537557918E-5 0.0 0.0 3.2059205856786264 0.0 34 1.9937317075115836E-4 0.0 0.0 3.303812812517445 0.0 35 1.9937317075115836E-4 0.0 0.0 3.4292185369199237 0.0 36 1.9937317075115836E-4 0.0 0.0 3.5384750344915585 0.0 37 1.9937317075115836E-4 0.0 0.0 3.6446412479165504 0.0 38 1.9937317075115836E-4 0.0 0.0 3.760576746708349 0.0 39 1.9937317075115836E-4 0.0 0.0 3.9063185345274456 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 35 1.2117198E-7 45.0 1 TCGTTAA 20 7.032858E-4 45.0 23 TAGCCGT 25 3.8904498E-5 45.0 44 CGTTAAT 40 6.8139343E-9 45.0 24 GCGATAT 45 3.8380676E-10 45.0 9 TATCGTC 20 7.032858E-4 45.0 37 CCGTTTA 20 7.032858E-4 45.0 42 TATTACG 30 2.165225E-6 44.999996 1 CGCAACC 30 2.165225E-6 44.999996 16 CGGTCTA 100 0.0 42.75 31 ACGGGCC 95 0.0 42.63158 5 TGTAGCG 90 0.0 42.5 1 TTACGAG 70 0.0 41.785713 1 CGAGGGT 105 0.0 40.714287 4 TCGTTGA 150 0.0 40.5 24 CGTTGAT 150 0.0 40.5 25 CCCCGAT 50 1.0804797E-9 40.5 40 TACGGGA 420 0.0 39.642857 4 AAGGGAC 1030 0.0 39.538834 5 CGGTAGT 245 0.0 39.489796 12 >>END_MODULE