##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547491_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4392594 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.581331668713293 31.0 31.0 33.0 30.0 34.0 2 32.01708079553904 31.0 31.0 34.0 30.0 34.0 3 32.10038806227027 33.0 31.0 34.0 30.0 34.0 4 35.8237364982969 37.0 35.0 37.0 35.0 37.0 5 35.766189864121294 37.0 35.0 37.0 35.0 37.0 6 35.82017368324958 37.0 35.0 37.0 35.0 37.0 7 36.14890517994606 37.0 35.0 37.0 35.0 37.0 8 36.168479035394576 37.0 35.0 37.0 35.0 37.0 9 38.03526412866748 39.0 39.0 39.0 35.0 39.0 10 37.40031812637362 39.0 37.0 39.0 35.0 39.0 11 37.09982028842183 39.0 37.0 39.0 33.0 39.0 12 36.75049822496684 39.0 35.0 39.0 33.0 39.0 13 36.605895058819456 39.0 35.0 39.0 33.0 39.0 14 37.759077665725535 40.0 36.0 41.0 33.0 41.0 15 37.87516601807497 40.0 36.0 41.0 33.0 41.0 16 37.93314110067992 40.0 36.0 41.0 33.0 41.0 17 37.83919319654856 40.0 36.0 41.0 33.0 41.0 18 37.734841872478995 40.0 36.0 41.0 33.0 41.0 19 37.747487247854004 40.0 36.0 41.0 33.0 41.0 20 37.6531074804546 40.0 35.0 41.0 33.0 41.0 21 37.554733945363495 39.0 35.0 41.0 33.0 41.0 22 37.48111890149647 39.0 35.0 41.0 32.0 41.0 23 37.37764063785544 39.0 35.0 41.0 32.0 41.0 24 37.27703243231676 39.0 35.0 41.0 32.0 41.0 25 37.17437555121188 39.0 35.0 41.0 32.0 41.0 26 37.15617491623401 39.0 35.0 41.0 32.0 41.0 27 37.10968917227497 39.0 35.0 41.0 32.0 41.0 28 37.09578303845063 39.0 35.0 41.0 32.0 41.0 29 37.05749131378862 39.0 35.0 41.0 32.0 41.0 30 36.99632791011416 39.0 35.0 41.0 31.0 41.0 31 36.95518638872611 39.0 35.0 41.0 31.0 41.0 32 36.839706332977734 39.0 35.0 41.0 31.0 41.0 33 36.783524723659866 39.0 35.0 41.0 31.0 41.0 34 36.68717800916725 39.0 35.0 41.0 31.0 41.0 35 36.5432835358788 39.0 35.0 41.0 30.0 41.0 36 36.421165489002625 39.0 35.0 41.0 30.0 41.0 37 36.38569282751832 39.0 35.0 41.0 30.0 41.0 38 36.27164859761681 39.0 35.0 41.0 30.0 41.0 39 36.21035975553397 39.0 35.0 41.0 30.0 41.0 40 36.083659222773605 39.0 35.0 41.0 29.0 41.0 41 36.03125374209408 39.0 35.0 41.0 29.0 41.0 42 36.00937874067123 38.0 35.0 41.0 29.0 41.0 43 35.90796372257486 38.0 35.0 41.0 29.0 41.0 44 35.78107765024493 38.0 35.0 40.0 28.0 41.0 45 35.65382641782965 38.0 35.0 40.0 28.0 41.0 46 35.605017900584485 38.0 35.0 40.0 28.0 41.0 47 35.524967479352746 38.0 34.0 40.0 28.0 41.0 48 35.402423715918204 38.0 34.0 40.0 27.0 41.0 49 35.313388854057536 38.0 34.0 40.0 27.0 41.0 50 35.21747627939209 38.0 34.0 40.0 27.0 41.0 51 34.87002531989071 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 4.0 12 14.0 13 23.0 14 61.0 15 114.0 16 243.0 17 562.0 18 1239.0 19 2508.0 20 4564.0 21 7296.0 22 11185.0 23 16973.0 24 24628.0 25 35477.0 26 47379.0 27 57831.0 28 64960.0 29 75254.0 30 89827.0 31 109434.0 32 136945.0 33 178222.0 34 292325.0 35 454516.0 36 302680.0 37 401916.0 38 658214.0 39 1417754.0 40 443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.79226352355806 24.011825358774335 29.980143851218667 13.215767266448935 2 29.289936652465492 25.76543609539147 31.28932471336982 13.655302538773217 3 28.774478132966536 25.85995883070459 31.659698119152374 13.705864917176502 4 24.905033335655425 28.18708034478033 31.63064922458119 15.277237094983057 5 23.17748920114174 32.867663162131535 29.687970251746464 14.266877384980264 6 21.69749810704108 42.592805071445255 25.621398198877475 10.088298622636191 7 91.55055076795169 2.8353405755232557 4.491696705864462 1.1224119506605892 8 92.92575184503735 1.7588695882205365 4.1972920784393 1.1180864883028114 9 88.49559053261011 4.208060203151031 5.6004720673023725 1.6958771969364799 10 38.910197482398786 36.912790027942485 15.434683924806162 8.742328564852569 11 30.126845321921397 25.291752436032105 27.942190878556044 16.639211363490457 12 29.841046088029078 23.344338220195173 29.53835478535007 17.27626090642568 13 23.447625708180635 29.712989636647503 28.772679651249355 18.06670500392251 14 18.25584153691418 33.16864704545879 29.998902698496604 18.576608719130427 15 17.60827429077215 28.314658718743413 37.07667952011955 17.000387470364892 16 21.87270209812243 25.687532241768757 35.54860749707348 16.89115816303533 17 21.27499149705163 24.659187714594154 29.19935236445708 24.866468423897132 18 22.014713857005678 26.879128824562432 31.75208088887796 19.354076429553928 19 24.528103439562134 27.56139083193211 28.13660902874247 19.773896699763284 20 26.211459561252415 27.29869867326687 28.05437971276198 18.435462052718734 21 24.3979753193671 26.601411375601753 30.941193290342788 18.05942001468836 22 24.059155023204966 23.4681602715844 30.37198520965061 22.10069949556003 23 20.539662896229427 27.770492788543628 30.775824034727545 20.914020280499404 24 20.38201117608411 27.8855045560778 33.05495568222331 18.677528585614787 25 20.15230635929476 28.258245583361447 31.21260467049766 20.376843386846133 26 20.199340071037753 31.410164472291314 27.135605976787293 21.25488947988364 27 19.33577289410312 30.12306623375618 31.209576846847213 19.331584025293484 28 17.320244028926872 29.288297529887807 34.23537435966083 19.156084081524494 29 19.103267909576893 26.665155031400577 33.601876248977256 20.62970081004527 30 20.69631293035505 27.683960775796717 32.70322729576191 18.916498998086325 31 24.645642187736904 27.689242392991474 27.806576250844035 19.858539168427587 32 23.5817378068631 28.183847630807673 29.045434201294267 19.18898036103496 33 23.094576917420547 28.02150619884287 28.849946068314075 20.033970815422506 34 20.097350221759626 28.14619334270365 30.17815896483945 21.57829747069727 35 20.209948836609986 27.083313413440894 30.72357700256386 21.98316074738526 36 24.368334519420642 27.896363743154957 28.15286366097117 19.58243807645323 37 20.58667384238106 29.235617951488347 30.03981246616464 20.137895739965952 38 20.5884950896896 30.449456517037543 27.94970352370376 21.012344869569098 39 20.114492712051238 28.83212061028176 29.58632188633869 21.467064791328312 40 22.02504943548163 27.286632909847803 28.969852437989946 21.71846521668062 41 19.212838700776807 26.80070136233852 30.131443971375454 23.855015965509217 42 21.050841484553317 27.731996173559402 28.031181575169477 23.185980766717798 43 21.42050915700381 27.119738359611656 28.96928329820603 22.490469185178508 44 20.49918567479717 29.04183723785991 29.24046702244733 21.218510064895597 45 20.13741766254746 30.8208771400225 27.14061440688577 21.901090790544266 46 21.981248437711294 29.853817584780202 28.188286921122234 19.97664705638627 47 21.249357441183957 28.583133337613265 29.012219203504806 21.15529001769797 48 21.686821044694778 27.590599085642786 29.828433950417455 20.894145919244984 49 20.936626512716632 27.136516600441563 30.02922646618376 21.897630420658043 50 19.906779456512485 29.300886901908076 29.822742552578273 20.96959108900117 51 19.78844391264023 29.512060527333052 29.02617451100648 21.673321049020235 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3472.0 1 4948.5 2 6425.0 3 19534.0 4 32643.0 5 23624.0 6 14605.0 7 14170.0 8 13735.0 9 13973.0 10 14211.0 11 14221.0 12 14231.0 13 14343.5 14 14456.0 15 13602.5 16 12749.0 17 14634.0 18 16519.0 19 16382.5 20 16246.0 21 16600.5 22 16955.0 23 24262.5 24 31570.0 25 35976.5 26 52072.5 27 63762.0 28 75839.5 29 87917.0 30 99135.0 31 110353.0 32 126100.0 33 141847.0 34 155117.0 35 168387.0 36 185326.5 37 202266.0 38 220534.0 39 238802.0 40 268203.0 41 297604.0 42 322992.0 43 348380.0 44 356257.5 45 364135.0 46 359568.0 47 355001.0 48 341713.0 49 328425.0 50 318257.0 51 308089.0 52 284996.0 53 261903.0 54 238226.0 55 214549.0 56 194270.5 57 173992.0 58 157842.0 59 141692.0 60 127877.0 61 114062.0 62 97844.0 63 81626.0 64 67455.0 65 53284.0 66 44413.0 67 35542.0 68 27505.0 69 19468.0 70 16107.0 71 12746.0 72 10698.0 73 8650.0 74 6839.0 75 4426.5 76 3825.0 77 2676.0 78 1527.0 79 1243.5 80 960.0 81 585.0 82 210.0 83 160.0 84 110.0 85 98.5 86 87.0 87 86.5 88 86.0 89 61.5 90 37.0 91 26.5 92 16.0 93 13.0 94 10.0 95 11.0 96 12.0 97 8.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4392594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.15590267456445 #Duplication Level Percentage of deduplicated Percentage of total 1 80.77230399571398 12.241771781593744 2 8.354157866016717 2.532296070905928 3 2.5699989588626164 1.1685196228276136 4 1.2518058262851155 0.7588898908251976 5 0.6737303951623631 0.5105496148988311 6 0.437101421457546 0.3974799961514607 7 0.341032956234844 0.3618063605460005 8 0.2688818352052589 0.3260117540263345 9 0.21344229874631615 0.291141963579103 >10 2.1899000174810266 7.832951923739416 >50 0.9574777496193154 10.666674749912884 >100 1.9525719573129299 60.30807128804491 >500 0.014409470523262233 1.419456498676845 >1k 0.0030335727417394177 0.7433715775294854 >5k 0.0 0.0 >10k+ 1.5167863708697089E-4 0.44100690674229676 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19184 0.4367351045874032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2765591356724524E-5 0.0 0.0 0.020352438672911723 0.0 2 2.2765591356724524E-5 0.0 0.0 0.06809188374796304 0.0 3 2.2765591356724524E-5 0.0 0.0 0.09982711809923703 0.0 4 2.2765591356724524E-5 0.0 0.0 0.17811798677501267 0.0 5 2.2765591356724524E-5 0.0 0.0 0.3234079908136286 0.0 6 2.2765591356724524E-5 0.0 0.0 0.4814011948292968 0.0 7 2.2765591356724524E-5 0.0 0.0 0.5677966140280664 0.0 8 2.2765591356724524E-5 0.0 0.0 0.7706380330164818 0.0 9 2.2765591356724524E-5 0.0 0.0 0.831035146885872 0.0 10 2.2765591356724524E-5 0.0 0.0 0.9595696756859387 0.0 11 2.2765591356724524E-5 0.0 0.0 1.1329751850501093 0.0 12 2.2765591356724524E-5 0.0 0.0 1.2788343288726434 0.0 13 2.2765591356724524E-5 0.0 0.0 1.3325155932917998 0.0 14 2.2765591356724524E-5 0.0 0.0 1.3545982169078226 0.0 15 2.2765591356724524E-5 0.0 0.0 1.388518948029342 0.0 16 2.2765591356724524E-5 0.0 0.0 1.4678797994988837 0.0 17 2.2765591356724524E-5 0.0 0.0 1.569846883185653 0.0 18 2.2765591356724524E-5 0.0 0.0 1.6992009732745617 0.0 19 2.2765591356724524E-5 0.0 0.0 1.7791992613020917 0.0 20 2.2765591356724524E-5 0.0 0.0 1.8628628095380544 0.0 21 2.2765591356724524E-5 0.0 0.0 1.9726840222428934 0.0 22 2.2765591356724524E-5 0.0 0.0 2.097234572555533 0.0 23 2.2765591356724524E-5 0.0 0.0 2.226679725009869 0.0 24 2.2765591356724524E-5 0.0 0.0 2.320701617313141 0.0 25 2.2765591356724524E-5 0.0 0.0 2.406937677372414 0.0 26 2.2765591356724524E-5 0.0 0.0 2.4924224729169144 0.0 27 2.2765591356724524E-5 0.0 0.0 2.5792504383514614 0.0 28 2.2765591356724524E-5 0.0 0.0 2.6775067306470848 0.0 29 2.2765591356724524E-5 0.0 0.0 2.784322885292836 0.0 30 2.2765591356724524E-5 0.0 0.0 2.916818626988973 0.0 31 2.2765591356724524E-5 0.0 0.0 3.032012519253999 0.0 32 2.2765591356724524E-5 0.0 0.0 3.14522580507099 0.0 33 4.553118271344905E-5 0.0 0.0 3.260897774754507 0.0 34 4.553118271344905E-5 0.0 0.0 3.380508191742738 0.0 35 4.553118271344905E-5 0.0 0.0 3.528643894700944 0.0 36 4.553118271344905E-5 0.0 0.0 3.656427158986239 0.0 37 4.553118271344905E-5 0.0 0.0 3.7870561221911245 0.0 38 4.553118271344905E-5 0.0 0.0 3.9453908100771433 0.0 39 4.553118271344905E-5 0.0 0.0 4.141288723701758 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 430 0.0 43.953487 31 TCGGTAA 60 3.6379788E-12 41.249996 34 CGTTTTT 9990 0.0 40.51802 1 CGTAAGG 955 0.0 39.581154 2 AGTCGGC 165 0.0 39.545452 30 TACGGGA 1720 0.0 39.244186 4 ATAGCGG 1040 0.0 39.158657 2 CGACGGT 485 0.0 38.969074 28 GGACCGA 2460 0.0 38.963413 8 ACGGGAT 2265 0.0 38.741722 5 CGTTAGG 1150 0.0 38.739132 2 AAGGGAT 8625 0.0 38.660866 5 GGGCGAT 6475 0.0 38.43243 7 ACGTAAG 300 0.0 38.25 1 CGCATCG 165 0.0 38.181816 21 AGGGATT 10275 0.0 38.16788 6 TTAGGGA 6775 0.0 38.158672 4 TAAGGGA 6705 0.0 38.15436 4 TAGGGAC 5205 0.0 38.083572 5 ACGATAA 65 9.094947E-12 38.076927 19 >>END_MODULE