SRR1547489_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547489_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2516550
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16137	0.641235024140192	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6096	0.24223639506467187	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2864	0.11380660030597446	No Hit
AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2554	0.10148814845721324	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCATA	60	0.0	45.000004	30
CGTAAGA	30	2.1665346E-6	45.000004	10
GTATACG	120	0.0	45.000004	1
CATCGAA	30	2.1665346E-6	45.000004	35
TCGAAGT	30	2.1665346E-6	45.000004	37
TACGTGC	30	2.1665346E-6	45.000004	41
TATCACG	20	7.0348877E-4	45.0	1
AGGTAAC	45	3.8562575E-10	45.0	33
AACCGAT	25	3.8921335E-5	45.0	24
CGAACTA	40	6.8212103E-9	45.0	22
CGTATTA	45	3.8562575E-10	45.0	31
GATCGAC	25	3.8921335E-5	45.0	9
ACGCATA	20	7.0348877E-4	45.0	22
ACGTTAG	80	0.0	45.0	1
ACGTTAC	20	7.0348877E-4	45.0	45
GCGAACT	20	7.0348877E-4	45.0	9
GCGAAAC	40	6.8212103E-9	45.0	23
CACGCGT	20	7.0348877E-4	45.0	38
GCACGAT	35	1.212702E-7	45.0	13
GTCTAGA	25	3.8921335E-5	45.0	37