##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547489_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2516550 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60675766426258 31.0 31.0 33.0 30.0 34.0 2 32.01645149112873 31.0 31.0 34.0 30.0 34.0 3 32.03772585484095 33.0 31.0 34.0 30.0 34.0 4 35.774095090500886 37.0 35.0 37.0 35.0 37.0 5 35.7137907055294 37.0 35.0 37.0 33.0 37.0 6 35.77048498937037 37.0 35.0 37.0 35.0 37.0 7 36.113536389104134 37.0 35.0 37.0 35.0 37.0 8 36.12906797003835 37.0 35.0 37.0 35.0 37.0 9 37.99980807057281 39.0 39.0 39.0 35.0 39.0 10 37.495067850827525 39.0 37.0 39.0 35.0 39.0 11 37.10088494168604 39.0 37.0 39.0 33.0 39.0 12 36.07898352903777 37.0 35.0 39.0 33.0 39.0 13 35.60921579146053 37.0 35.0 39.0 31.0 39.0 14 36.54116826607856 38.0 35.0 41.0 31.0 41.0 15 36.860240805865175 38.0 35.0 41.0 32.0 41.0 16 37.02850450020862 38.0 35.0 41.0 33.0 41.0 17 36.992570781426956 38.0 35.0 41.0 32.0 41.0 18 36.888181438874646 38.0 35.0 41.0 32.0 41.0 19 36.8273978263893 38.0 35.0 41.0 32.0 41.0 20 36.639010152788536 37.0 35.0 41.0 32.0 41.0 21 36.486852238183225 37.0 35.0 40.0 32.0 41.0 22 36.38384335697681 37.0 35.0 40.0 31.0 41.0 23 36.37187419284338 37.0 35.0 40.0 31.0 41.0 24 36.22232659792176 37.0 35.0 40.0 31.0 41.0 25 36.09472492102283 36.0 35.0 40.0 31.0 41.0 26 36.03131509407721 36.0 35.0 40.0 31.0 41.0 27 35.969009159365 36.0 35.0 40.0 31.0 41.0 28 35.98531958435159 36.0 35.0 40.0 31.0 41.0 29 35.978751067930304 36.0 35.0 40.0 31.0 41.0 30 35.95941666169955 36.0 35.0 40.0 31.0 41.0 31 35.754933142596016 36.0 35.0 40.0 30.0 41.0 32 35.56576543283464 36.0 34.0 40.0 30.0 41.0 33 35.44309590510819 36.0 34.0 40.0 30.0 41.0 34 35.32177385706622 36.0 34.0 40.0 29.0 41.0 35 35.12506010212394 36.0 34.0 40.0 29.0 41.0 36 34.92672190101528 36.0 34.0 40.0 27.0 41.0 37 34.83763445987562 36.0 34.0 40.0 27.0 41.0 38 34.70112137648765 35.0 34.0 40.0 26.0 41.0 39 34.674125687945796 36.0 34.0 40.0 26.0 41.0 40 34.465163418171706 36.0 34.0 40.0 24.0 41.0 41 34.41344896783295 35.0 34.0 40.0 24.0 41.0 42 34.36351791142636 35.0 34.0 40.0 24.0 41.0 43 34.23778267866722 35.0 33.0 40.0 24.0 41.0 44 34.09013013848324 35.0 33.0 40.0 23.0 41.0 45 33.96367248812859 35.0 33.0 40.0 23.0 41.0 46 33.92418469730385 35.0 33.0 40.0 23.0 41.0 47 33.85789433947269 35.0 33.0 40.0 23.0 41.0 48 33.74812699926487 35.0 33.0 39.0 23.0 41.0 49 33.69509606405595 35.0 33.0 39.0 23.0 41.0 50 33.54239415072222 35.0 33.0 39.0 23.0 41.0 51 33.15443841767499 35.0 33.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 10.0 12 9.0 13 16.0 14 36.0 15 87.0 16 242.0 17 525.0 18 1248.0 19 2457.0 20 4278.0 21 6841.0 22 10441.0 23 15160.0 24 21320.0 25 30259.0 26 39734.0 27 45924.0 28 49877.0 29 54969.0 30 63866.0 31 76916.0 32 95941.0 33 127590.0 34 243425.0 35 451867.0 36 156141.0 37 191306.0 38 289432.0 39 536485.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.947408157994076 24.087619955891995 29.256044982217716 13.708926903896208 2 30.388627287357693 26.05571119190956 29.95469988674972 13.600961633983033 3 28.622479187776918 25.7048339989271 31.781367348155214 13.891319465140766 4 25.741789354473386 27.157179471896047 31.065188452444815 16.03584272118575 5 23.249289702171623 32.442311895253425 30.074427291331386 14.233971111243568 6 22.03099481432914 40.77165166597127 27.279807673203393 9.917545846496195 7 88.2391766505732 3.8972402694164634 6.369513818521389 1.494069261488943 8 89.18129979535475 2.9641771472849734 5.996979992449981 1.8575430649102938 9 85.5265740795931 4.797440940970773 7.280960044505375 2.3950249349307584 10 53.69271423178558 24.590332002145797 12.412469452226262 9.304484313842364 11 48.0050068546224 19.766823627585385 18.732669726411157 13.495499791381057 12 42.350916929923905 19.951083825077983 23.47145894180525 14.226540303192865 13 22.777890365778546 39.5848284357553 23.741153563410226 13.89612763505593 14 15.67034233375057 42.63181736901711 27.155589994238145 14.542250302994178 15 14.357314577496972 24.128310583934354 47.733961177008204 13.78041366156047 16 16.87119270429755 19.463034710218356 45.80369950924877 17.862073076235323 17 18.628161570403925 18.626214460272994 27.2179769923109 35.527646977012175 18 23.16731239196519 23.22866622956031 33.53332935963919 20.07069201883531 19 29.227275436609645 25.243766267310402 25.18471717231925 20.344241123760703 20 32.31022630188154 23.79388448471121 24.867457431801473 19.02843178160577 21 23.967932288251774 26.82132284278079 28.37134171782798 20.839403151139457 22 24.150006953964752 22.711887306034054 27.150821561264433 25.987284178736765 23 20.431463710238223 29.553833621426158 24.603365718940612 25.411336949395004 24 20.940017086884822 24.141185352963383 37.84812540978721 17.070672150364587 25 18.16200751028193 24.535534759889533 35.51667958117264 21.7857781486559 26 17.477061850549365 34.467584590014106 26.156960918718084 21.898392640718445 27 18.606703622022213 33.095468001827896 29.97258151040114 18.325246865748742 28 14.949077109534878 28.706165186465597 38.93036101011305 17.414396693886474 29 15.734279072539787 25.722040094573924 37.8457014563589 20.69797937652739 30 19.028709940195903 30.036518249190358 32.84246289563092 18.092308914982812 31 30.69507857980171 26.65426874093501 24.45284218473704 18.197810494526237 32 29.8857562933381 26.868331644513322 25.532256462220104 17.713655599928472 33 27.64471200651686 27.96733623413006 24.339870060201466 20.048081699151616 34 19.789910790566452 28.169160159742507 28.427728437742143 23.613200611948898 35 20.01037134171783 26.23361347877054 30.870397965468598 22.885617214043037 36 31.76988337207685 23.17069003198824 27.35109574616042 17.70833084977449 37 20.821601001370922 30.199002602769664 29.776519441298603 19.202876954560807 38 20.854741610538234 32.1884325763446 24.22109634221454 22.735729470902623 39 21.131270986072202 30.42355605889015 27.65106991714848 20.794103037889176 40 24.752180564661938 26.15974250461942 25.70745663706265 23.380620293655994 41 19.24869364804991 22.490989648526753 28.87715324551469 29.383163457908644 42 23.641612525083943 24.945262363155905 25.18817428622519 26.22495082553496 43 23.55232361765115 25.12833045240508 26.47155828415887 24.847787645784905 44 20.143490095567344 30.290516778923525 27.692237388488206 21.87375573702092 45 19.178120840038943 36.221016868331645 22.808448073751762 21.79241421787765 46 23.708450060598835 31.41427748306213 25.389839264071846 19.487433192267194 47 22.833124714390735 27.926089288907434 26.36569907214242 22.87508692455942 48 24.61775049174465 24.614651010311736 29.870656255588006 20.896942242355607 49 22.40984681409072 22.62875762452564 31.51501062963184 23.446384931751805 50 21.042299974170987 30.978681130913355 27.284814527825795 20.694204367089867 51 18.751107667242852 33.60457769565476 23.862311497884008 23.782003139218375 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3706.0 1 4467.5 2 5229.0 3 15448.5 4 25668.0 5 18515.5 6 11363.0 7 11309.5 8 11256.0 9 12035.0 10 12814.0 11 12809.5 12 12805.0 13 12149.0 14 11493.0 15 11027.0 16 10561.0 17 10470.0 18 10379.0 19 9931.0 20 9483.0 21 9554.5 22 9626.0 23 8890.5 24 8155.0 25 10450.5 26 14874.5 27 17003.0 28 20431.5 29 23860.0 30 25986.0 31 28112.0 32 33357.0 33 38602.0 34 48702.0 35 58802.0 36 60069.5 37 61337.0 38 73530.0 39 85723.0 40 123016.0 41 160309.0 42 202425.0 43 244541.0 44 264426.0 45 284311.0 46 259561.0 47 234811.0 48 217840.0 49 200869.0 50 183914.0 51 166959.0 52 154441.5 53 141924.0 54 133369.5 55 124815.0 56 119356.5 57 113898.0 58 105069.0 59 96240.0 60 89543.0 61 82846.0 62 70562.0 63 58278.0 64 50841.0 65 43404.0 66 38457.5 67 33511.0 68 28333.0 69 23155.0 70 19497.0 71 15839.0 72 12521.5 73 9204.0 74 7518.5 75 4254.0 76 2675.0 77 2365.5 78 2056.0 79 1570.0 80 1084.0 81 836.5 82 589.0 83 472.5 84 356.0 85 254.0 86 152.0 87 111.5 88 71.0 89 55.0 90 39.0 91 30.5 92 22.0 93 16.0 94 10.0 95 10.0 96 10.0 97 12.0 98 14.0 99 8.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2516550.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.069624386881504 #Duplication Level Percentage of deduplicated Percentage of total 1 82.32394332908274 13.229148473452787 2 8.820197144573797 2.8347451026309134 3 2.5665500737400553 1.2373048696537714 4 1.1529403393942337 0.7410927277819606 5 0.644043542491262 0.5174768908315568 6 0.42239530092589067 0.4072640297197706 7 0.28722413788933576 0.32309088075092396 8 0.22748791598741497 0.2924516289977771 9 0.17412340098797008 0.2518287885758727 >10 1.3932512752204802 4.770028430267417 >50 0.43085775198656645 5.029878484889379 >100 1.460495828916384 59.81807283750005 >500 0.09177708163863339 8.659324940364268 >1k 0.004216784832045318 1.0020825941492142 >5k 2.4804616659090104E-4 0.24298709204190966 >10k+ 2.4804616659090104E-4 0.643222228392437 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16137 0.641235024140192 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6096 0.24223639506467187 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2864 0.11380660030597446 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2554 0.10148814845721324 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.973694144761678E-5 0.0 0.0 0.04549879795752121 0.0 2 3.973694144761678E-5 0.0 0.0 0.17118674375633308 0.0 3 3.973694144761678E-5 0.0 0.0 0.24187876259164331 0.0 4 3.973694144761678E-5 0.0 0.0 0.4497427033041267 0.0 5 3.973694144761678E-5 0.0 0.0 0.7280602412032345 0.0 6 3.973694144761678E-5 0.0 0.0 1.04043233792295 0.0 7 3.973694144761678E-5 0.0 0.0 1.1706502950467903 0.0 8 3.973694144761678E-5 0.0 0.0 1.4772605352566013 0.0 9 3.973694144761678E-5 0.0 0.0 1.5567344181518348 0.0 10 7.947388289523356E-5 0.0 0.0 1.7236693091732729 0.0 11 7.947388289523356E-5 0.0 0.0 1.9434145953785937 0.0 12 7.947388289523356E-5 0.0 0.0 2.112693965945441 0.0 13 7.947388289523356E-5 0.0 0.0 2.1822336134787705 0.0 14 7.947388289523356E-5 0.0 0.0 2.211122369911188 0.0 15 7.947388289523356E-5 0.0 0.0 2.2598001231845184 0.0 16 7.947388289523356E-5 0.0 0.0 2.368957501341122 0.0 17 7.947388289523356E-5 0.0 0.0 2.4946454471399337 0.0 18 7.947388289523356E-5 0.0 0.0 2.6839919731378274 0.0 19 7.947388289523356E-5 0.0 0.0 2.762551906379766 0.0 20 7.947388289523356E-5 0.0 0.0 2.8545826627724464 0.0 21 7.947388289523356E-5 0.0 0.0 2.97740954878703 0.0 22 7.947388289523356E-5 0.0 0.0 3.094673262998947 0.0 23 7.947388289523356E-5 0.0 0.0 3.225765432834635 0.0 24 7.947388289523356E-5 0.0 0.0 3.319783036299696 0.0 25 7.947388289523356E-5 0.0 0.0 3.403548508871272 0.0 26 7.947388289523356E-5 0.0 0.0 3.48361844588822 0.0 27 7.947388289523356E-5 0.0 0.0 3.5690131330591486 0.0 28 7.947388289523356E-5 0.0 0.0 3.656990721424172 0.0 29 7.947388289523356E-5 0.0 0.0 3.7507699032405477 0.0 30 7.947388289523356E-5 0.0 0.0 3.89012735689734 0.0 31 7.947388289523356E-5 0.0 0.0 4.003536587788838 0.0 32 7.947388289523356E-5 0.0 0.0 4.10303788917367 0.0 33 7.947388289523356E-5 0.0 0.0 4.204963143986808 0.0 34 7.947388289523356E-5 0.0 0.0 4.314041048260515 0.0 35 7.947388289523356E-5 0.0 0.0 4.466392481770678 0.0 36 7.947388289523356E-5 0.0 0.0 4.572847747908844 0.0 37 7.947388289523356E-5 0.0 0.0 4.690230672945104 0.0 38 1.1921082434285033E-4 0.0 0.0 4.811865450716258 0.0 39 1.1921082434285033E-4 0.0 0.0 4.987820627446306 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCATA 60 0.0 45.000004 30 CGTAAGA 30 2.1665346E-6 45.000004 10 GTATACG 120 0.0 45.000004 1 CATCGAA 30 2.1665346E-6 45.000004 35 TCGAAGT 30 2.1665346E-6 45.000004 37 TACGTGC 30 2.1665346E-6 45.000004 41 TATCACG 20 7.0348877E-4 45.0 1 AGGTAAC 45 3.8562575E-10 45.0 33 AACCGAT 25 3.8921335E-5 45.0 24 CGAACTA 40 6.8212103E-9 45.0 22 CGTATTA 45 3.8562575E-10 45.0 31 GATCGAC 25 3.8921335E-5 45.0 9 ACGCATA 20 7.0348877E-4 45.0 22 ACGTTAG 80 0.0 45.0 1 ACGTTAC 20 7.0348877E-4 45.0 45 GCGAACT 20 7.0348877E-4 45.0 9 GCGAAAC 40 6.8212103E-9 45.0 23 CACGCGT 20 7.0348877E-4 45.0 38 GCACGAT 35 1.212702E-7 45.0 13 GTCTAGA 25 3.8921335E-5 45.0 37 >>END_MODULE