##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547487_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1286573 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.569727485342845 31.0 31.0 33.0 30.0 34.0 2 32.011882730323116 31.0 31.0 34.0 30.0 34.0 3 32.091695535348556 33.0 31.0 34.0 30.0 34.0 4 35.83026303210156 37.0 35.0 37.0 35.0 37.0 5 35.76696230995054 37.0 35.0 37.0 35.0 37.0 6 35.821320671271664 37.0 35.0 37.0 35.0 37.0 7 36.097226507940086 37.0 35.0 37.0 35.0 37.0 8 36.09540461365193 37.0 35.0 37.0 35.0 37.0 9 37.95463296680406 39.0 38.0 39.0 35.0 39.0 10 37.43553144671931 39.0 37.0 39.0 35.0 39.0 11 37.10052441641477 39.0 37.0 39.0 33.0 39.0 12 36.52519678246007 39.0 35.0 39.0 33.0 39.0 13 36.281837874726115 39.0 35.0 39.0 32.0 39.0 14 37.34680426217556 40.0 35.0 41.0 32.0 41.0 15 37.502949307967754 40.0 35.0 41.0 33.0 41.0 16 37.59661985755958 40.0 35.0 41.0 33.0 41.0 17 37.51015760473755 39.0 35.0 41.0 33.0 41.0 18 37.39742167758845 39.0 35.0 41.0 32.0 41.0 19 37.36817421164598 39.0 35.0 41.0 32.0 41.0 20 37.260036546701976 39.0 35.0 41.0 32.0 41.0 21 37.11191436475039 39.0 35.0 41.0 32.0 41.0 22 37.06042331060888 39.0 35.0 41.0 32.0 41.0 23 36.98474707614725 39.0 35.0 41.0 32.0 41.0 24 36.835329204017185 38.0 35.0 41.0 31.0 41.0 25 36.70813471136111 38.0 35.0 41.0 31.0 41.0 26 36.65026858172836 38.0 35.0 41.0 31.0 41.0 27 36.62833123343953 38.0 35.0 41.0 31.0 41.0 28 36.601429534118935 38.0 35.0 41.0 31.0 41.0 29 36.55694235772086 38.0 35.0 41.0 31.0 41.0 30 36.49215163072752 38.0 35.0 40.0 31.0 41.0 31 36.437072750632886 38.0 35.0 41.0 31.0 41.0 32 36.309324849814196 38.0 35.0 41.0 30.0 41.0 33 36.2342921855192 38.0 35.0 41.0 30.0 41.0 34 36.10756016176307 38.0 35.0 41.0 30.0 41.0 35 35.93547587272545 38.0 35.0 41.0 30.0 41.0 36 35.79860995062076 38.0 35.0 41.0 29.0 41.0 37 35.729608813491346 38.0 35.0 40.0 29.0 41.0 38 35.590493504838044 38.0 35.0 40.0 28.0 41.0 39 35.51077319359259 38.0 35.0 40.0 28.0 41.0 40 35.3420660934125 38.0 34.0 40.0 27.0 41.0 41 35.274200531178565 38.0 34.0 40.0 27.0 41.0 42 35.22318127304086 37.0 34.0 40.0 27.0 41.0 43 35.09897145362137 37.0 34.0 40.0 27.0 41.0 44 34.966535128593556 37.0 34.0 40.0 26.0 41.0 45 34.84390236698578 37.0 34.0 40.0 26.0 41.0 46 34.78260464038962 37.0 34.0 40.0 26.0 41.0 47 34.70445750066261 36.0 34.0 40.0 25.0 41.0 48 34.577602670038935 36.0 34.0 40.0 25.0 41.0 49 34.46320962743661 36.0 34.0 40.0 24.0 41.0 50 34.37137029923681 36.0 34.0 40.0 24.0 41.0 51 33.973837473660645 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 10.0 13 15.0 14 35.0 15 58.0 16 133.0 17 302.0 18 553.0 19 1117.0 20 1954.0 21 2987.0 22 4391.0 23 6226.0 24 8692.0 25 12456.0 26 16541.0 27 19775.0 28 21743.0 29 24682.0 30 29303.0 31 35683.0 32 44752.0 33 58681.0 34 103831.0 35 156437.0 36 91339.0 37 119549.0 38 183402.0 39 341814.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.65784374458348 23.800359559853966 29.817896069636156 13.723900625926394 2 30.244921974889884 25.668112108679413 30.106259030774 13.980706885656701 3 29.47007282136342 25.916368523200784 30.62002700196569 13.993531653470109 4 26.517111737927035 27.533299703942177 30.313864817620146 15.635723740510644 5 23.47018008305786 33.21506047460968 28.386729707525344 14.928029734807119 6 22.957733451580285 40.90549078831904 25.602278300570585 10.534497459530085 7 89.40930673968752 3.6222585115652204 5.4372351976918525 1.5311995510554006 8 90.41484626212426 2.7322196253146926 5.333782070663693 1.5191520418973505 9 85.861276429709 5.057000263490684 6.5165365665220705 2.565186740278243 10 46.436385653981546 29.5416583435219 12.732351759286104 11.289604243210452 11 37.267298474318984 22.759532494463976 23.452225408119087 16.52094362309795 12 33.88762238909102 21.077078409075895 27.12632707199669 17.908972129836396 13 24.659929906814458 29.395844619776724 27.52164082411181 18.422584649297008 14 19.03024546605595 32.471457119028614 29.320450530206994 19.177846884708448 15 17.89327150499816 25.93836494314742 37.96978484703161 18.19857870482281 16 22.419948187938033 23.035381591250555 36.19483698165592 18.349833239155494 17 22.996596384348187 22.57571082247179 27.21998673996734 27.207706053212682 18 24.952878694018917 24.094862864369144 29.916918822328775 21.035339619283167 19 27.621907190653 25.991840338636052 25.903854658849518 20.482397811861432 20 29.704416305953877 25.82861602101086 25.190408939096343 19.276558733938923 21 26.282224172277825 24.83527945946324 29.61130071904198 19.271195649216953 22 25.988575852283546 22.154281179536646 28.515443740852636 23.34169922732717 23 22.492621872214013 26.673807082847222 27.728547078168127 23.105023966770638 24 22.027277115251138 26.01982165022894 32.25172609715889 19.701175137361034 25 22.358000673105995 25.440841677852717 30.44421109412369 21.7569465549176 26 20.96872855251898 29.031698939741467 27.18221196931694 22.817360538422616 27 20.7076473701842 29.072349567416694 29.72019465665765 20.499808405741454 28 18.719575181509327 27.34465902828677 33.75890835576372 20.176857434440176 29 20.461800457494444 25.162738530965594 33.05346840016073 21.321992611379223 30 21.424124398693273 25.860172722418394 31.810787261974255 20.90491561691408 31 26.891594958078553 25.05555456239172 27.17832567604015 20.87452480348958 32 27.28613145153831 25.440297596793965 27.566410922660435 19.70716002900729 33 25.496337945845283 25.78866492612545 26.492006283358972 22.2229908446703 34 21.411299630879867 26.655930133773985 28.904928053052565 23.027842182293583 35 21.567606346472374 26.2960593763432 29.887771622752844 22.248562654431577 36 27.707405642742387 25.587277208522174 26.82513934304544 19.88017780569 37 22.40665706493141 27.860991953041143 28.615321478066146 21.117029503961298 38 23.102148109745812 29.279799902531767 25.48102595033473 22.1370260373877 39 21.920714953601543 28.26975227989395 27.137053241440633 22.67247952506387 40 24.345373328991048 25.601501041915224 26.24367214297207 23.809453486121658 41 21.05010753373497 24.89551700525349 28.78437523560653 25.27000022540501 42 24.109242149493266 25.382780456297464 26.47552839986538 24.032448994343888 43 22.546641348761398 25.61906708752632 28.600087208421133 23.234204355291148 44 22.129875257758403 27.37846977979485 27.785597863471406 22.70605709897534 45 21.306447438272063 29.520206004634016 25.49579386478653 23.677552692307394 46 23.324754988640365 27.423239878343473 27.02038671727139 22.231618415744773 47 22.985947940769783 27.062125507064117 27.770052690364246 22.181873861801858 48 24.098826883511467 26.092961689698136 28.25218623428286 21.556025192507537 49 22.725410839493758 25.32868325388454 29.596610530455713 22.349295376165983 50 22.103837092803907 27.305096562729048 28.788261528883318 21.802804815583727 51 21.079332459176435 29.14758820525536 26.813558189080606 22.959521146487607 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1431.0 1 1991.5 2 2552.0 3 6174.0 4 9796.0 5 7112.0 6 4428.0 7 4413.0 8 4398.0 9 4519.5 10 4641.0 11 4695.0 12 4749.0 13 4616.5 14 4484.0 15 4198.5 16 3913.0 17 3896.0 18 3879.0 19 4058.0 20 4237.0 21 4580.0 22 4923.0 23 5752.0 24 6581.0 25 8059.0 26 10747.5 27 11958.0 28 14282.5 29 16607.0 30 18622.5 31 20638.0 32 24539.0 33 28440.0 34 32311.0 35 36182.0 36 38675.5 37 41169.0 38 45453.5 39 49738.0 40 59913.0 41 70088.0 42 80149.0 43 90210.0 44 96979.0 45 103748.0 46 99477.5 47 95207.0 48 95238.5 49 95270.0 50 90733.0 51 86196.0 52 83570.0 53 80944.0 54 74914.5 55 68885.0 56 67036.0 57 65187.0 58 62229.5 59 59272.0 60 56824.5 61 54377.0 62 49143.5 63 43910.0 64 37237.0 65 30564.0 66 26832.0 67 23100.0 68 19705.5 69 16311.0 70 13791.5 71 11272.0 72 9205.0 73 7138.0 74 5927.0 75 3773.0 76 2830.0 77 2083.0 78 1336.0 79 1051.5 80 767.0 81 613.0 82 459.0 83 363.5 84 268.0 85 184.5 86 101.0 87 83.0 88 65.0 89 55.0 90 45.0 91 30.5 92 16.0 93 10.0 94 4.0 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1286573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.754430505244294 #Duplication Level Percentage of deduplicated Percentage of total 1 82.04394100581024 15.386873899698308 2 5.818482557715237 2.1824465354929297 3 1.717602059242853 0.9663794536720373 4 0.9387060894331093 0.7041959247649152 5 0.6173147512862741 0.5788693301430297 6 0.44731630430153113 0.5033497525731466 7 0.36146146171720117 0.4745302704869489 8 0.29719402157520464 0.4458963699364999 9 0.24824906380009992 0.41901928335278377 >10 4.235198177016797 20.503697085166046 >50 2.195771394237902 29.928872477341812 >100 1.0754374472312518 27.04733302619414 >500 0.002494249974251067 0.34748434315998195 >1k 4.157083290418446E-4 0.08271951718481958 >5k 4.157083290418446E-4 0.42833273083260964 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5494 0.4270259052537244 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011892057426978492 0.0 2 0.0 0.0 0.0 0.0512213453880969 0.0 3 0.0 0.0 0.0 0.08083490015723943 0.0 4 0.0 0.0 0.0 0.1687428540782373 0.0 5 0.0 0.0 0.0 0.3071726205975098 0.0 6 0.0 0.0 0.0 0.45648400829179536 0.0 7 0.0 0.0 0.0 0.5281472563158095 0.0 8 0.0 0.0 0.0 0.6854644081602832 0.0 9 0.0 0.0 0.0 0.7415047572116001 0.0 10 0.0 0.0 0.0 0.8524972931967327 0.0 11 0.0 0.0 0.0 1.0140893676456757 0.0 12 0.0 0.0 0.0 1.1476224046361925 0.0 13 0.0 0.0 0.0 1.2032741243598304 0.0 14 0.0 0.0 0.0 1.2228610424748538 0.0 15 0.0 0.0 0.0 1.2536404852270333 0.0 16 0.0 0.0 0.0 1.3144221120760347 0.0 17 0.0 0.0 0.0 1.390826637897733 0.0 18 0.0 0.0 0.0 1.4884503250107068 0.0 19 0.0 0.0 0.0 1.5430916084823791 0.0 20 0.0 0.0 0.0 1.609236320053351 0.0 21 0.0 0.0 0.0 1.6929470772354154 0.0 22 0.0 0.0 0.0 1.771605653157652 0.0 23 0.0 0.0 0.0 1.8584254449611488 0.0 24 0.0 0.0 0.0 1.9253474151874788 0.0 25 0.0 0.0 0.0 1.9793668917348646 0.0 26 0.0 0.0 0.0 2.0370394839624337 0.0 27 0.0 0.0 0.0 2.099375628122151 0.0 28 0.0 0.0 0.0 2.1628776602649054 0.0 29 0.0 0.0 0.0 2.2388935567589248 0.0 30 0.0 0.0 0.0 2.3219825070167026 0.0 31 0.0 0.0 0.0 2.4016515191909047 0.0 32 0.0 0.0 0.0 2.469195296341521 0.0 33 0.0 0.0 0.0 2.545988451490899 0.0 34 0.0 0.0 0.0 2.624336123950992 0.0 35 0.0 0.0 0.0 2.720871648946465 0.0 36 0.0 0.0 0.0 2.8014733715070967 0.0 37 0.0 0.0 0.0 2.8921794565873835 0.0 38 7.772586553580713E-5 0.0 0.0 2.9994411510267978 0.0 39 7.772586553580713E-5 0.0 0.0 3.1891699887997027 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCTACG 30 2.1657052E-6 45.000004 19 GTATTCG 20 7.0336007E-4 45.0 1 CGAAACA 25 3.891066E-5 45.0 31 ATTCGAC 25 3.891066E-5 45.0 35 CAATTCG 20 7.0336007E-4 45.0 1 TTAACGA 25 3.891066E-5 45.0 22 TTACGTC 25 3.891066E-5 45.0 28 TACCGGT 35 1.2120836E-7 45.0 13 TATAGCG 80 0.0 42.1875 1 TATTACG 60 3.6379788E-12 41.250004 1 ACGGGAT 530 0.0 41.179245 5 TAGGGAC 1095 0.0 40.47945 5 TATGGGC 490 0.0 40.408165 4 AACGGGA 615 0.0 40.2439 4 CGTTTTT 2925 0.0 40.230774 1 TACGTAG 135 0.0 40.0 1 TATCCGA 45 1.9286745E-8 40.0 44 GGCGATT 560 0.0 39.776783 8 ATTAACG 120 0.0 39.375004 1 TCACGAC 160 0.0 39.375 25 >>END_MODULE