##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547486_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5247975 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.529177825732784 31.0 31.0 33.0 30.0 34.0 2 31.937205302997825 31.0 31.0 34.0 30.0 34.0 3 31.786018607177056 33.0 31.0 34.0 30.0 34.0 4 35.64245980592514 37.0 35.0 37.0 33.0 37.0 5 35.64707091783021 37.0 35.0 37.0 33.0 37.0 6 35.73189030054449 37.0 35.0 37.0 33.0 37.0 7 36.108881616242456 37.0 35.0 37.0 35.0 37.0 8 36.13403341288783 37.0 35.0 37.0 35.0 37.0 9 37.98421238668248 39.0 38.0 39.0 35.0 39.0 10 37.44676051238811 39.0 37.0 39.0 35.0 39.0 11 37.10527946493647 39.0 37.0 39.0 33.0 39.0 12 36.8159463412078 39.0 35.0 39.0 33.0 39.0 13 36.680874623068895 39.0 35.0 39.0 33.0 39.0 14 37.81002805844159 40.0 36.0 41.0 33.0 41.0 15 37.91672445085962 40.0 36.0 41.0 33.0 41.0 16 37.979669682115485 40.0 36.0 41.0 33.0 41.0 17 37.90626346352641 40.0 36.0 41.0 33.0 41.0 18 37.732385539184165 39.0 36.0 41.0 33.0 41.0 19 37.633005111495386 39.0 36.0 41.0 33.0 41.0 20 37.44776146990029 39.0 35.0 41.0 33.0 41.0 21 37.33897112695849 39.0 35.0 41.0 32.0 41.0 22 37.28708158861275 39.0 35.0 41.0 32.0 41.0 23 37.19379760764866 39.0 35.0 41.0 32.0 41.0 24 37.0771806268132 39.0 35.0 41.0 32.0 41.0 25 36.956726737455874 39.0 35.0 41.0 32.0 41.0 26 36.90551498435111 39.0 35.0 41.0 32.0 41.0 27 36.856701680171874 39.0 35.0 41.0 32.0 41.0 28 36.81003606152849 39.0 35.0 41.0 31.0 41.0 29 36.72193312658692 38.0 35.0 41.0 31.0 41.0 30 36.62622821183409 38.0 35.0 41.0 31.0 41.0 31 36.48823879686927 38.0 35.0 41.0 31.0 41.0 32 36.28965400940363 38.0 35.0 41.0 30.0 41.0 33 36.10223714861446 38.0 35.0 41.0 30.0 41.0 34 35.85736498363654 38.0 35.0 41.0 29.0 41.0 35 35.60592075991216 38.0 35.0 41.0 27.0 41.0 36 35.45722092807225 38.0 35.0 41.0 25.0 41.0 37 35.38421867482219 38.0 35.0 41.0 25.0 41.0 38 35.219223414745684 38.0 34.0 41.0 24.0 41.0 39 35.12886589589318 38.0 34.0 41.0 24.0 41.0 40 34.966045760507626 38.0 34.0 40.0 23.0 41.0 41 34.887549006997936 38.0 34.0 40.0 23.0 41.0 42 34.86650184118636 38.0 34.0 40.0 23.0 41.0 43 34.77408333690614 38.0 34.0 40.0 23.0 41.0 44 34.639491803981535 38.0 34.0 40.0 23.0 41.0 45 34.53221690271009 38.0 34.0 40.0 23.0 41.0 46 34.47995121927982 38.0 34.0 40.0 23.0 41.0 47 34.40886513369443 37.0 34.0 40.0 23.0 41.0 48 34.27203311753581 37.0 33.0 40.0 22.0 41.0 49 34.172772164501545 37.0 33.0 40.0 22.0 41.0 50 34.08158480175687 37.0 33.0 40.0 21.0 41.0 51 33.75358914628976 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 9.0 12 25.0 13 29.0 14 68.0 15 180.0 16 419.0 17 1020.0 18 2222.0 19 4539.0 20 7745.0 21 12762.0 22 19701.0 23 29952.0 24 45221.0 25 69063.0 26 93249.0 27 104266.0 28 105532.0 29 108213.0 30 119265.0 31 139556.0 32 169600.0 33 216030.0 34 339687.0 35 503563.0 36 389612.0 37 481676.0 38 750151.0 39 1534156.0 40 460.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.670268055773892 23.402188463169125 28.302688179726466 17.624855301330513 2 33.4497401378627 24.468542628347123 29.415174424420847 12.666542809369327 3 27.707525283561758 24.72532738818306 35.091497196537716 12.475650131717472 4 24.136452631729384 27.298167388373614 34.275391936889946 14.289988043007066 5 21.944121303931517 31.65731544071761 33.19743329569977 13.201129959651103 6 20.67212591523397 39.83753733582953 29.833697759612043 9.656638989324454 7 86.43680657777524 2.7588736607929727 9.612965000786017 1.191354760645773 8 87.41914738542009 2.1086609597035046 9.211324367970503 1.2608672869059019 9 82.88808540437026 5.049090363425893 10.214530366474687 1.848293865729162 10 37.14438426250125 38.76055049804925 15.38589646482691 8.709168774622594 11 26.609330265483354 25.16637369652104 32.14304565094155 16.081250387054055 12 28.524640456557055 23.12177554199477 31.750818172723765 16.602765828724415 13 23.11533496253317 27.32730243570139 31.799827552532168 17.757535049233276 14 17.037924151696608 31.57511230522249 32.50524249829696 18.88172104478394 15 16.158556395562098 28.689542156736646 38.479947027186675 16.671954420514577 16 20.5285276701966 26.431394966629984 36.92837713594292 16.111700227230504 17 20.409815214439856 26.229336077248846 31.81592900118617 21.54491970712513 18 20.59895483496015 27.29830077315536 33.873465479542105 18.22927891234238 19 23.13911556362216 28.674584006211916 30.271447558343933 17.91485287182199 20 24.093197852505014 28.578756568009567 30.517656810484045 16.810388769001378 21 22.30828081307552 27.085380551546073 33.68308728604843 16.92325134932998 22 22.109289773674607 24.40453698807635 33.13417079921303 20.35200243903601 23 19.096680148057107 28.564541561268868 32.988743277168815 19.35003501350521 24 18.7205350635245 28.115663660745334 35.57863747445443 17.58516380127573 25 19.719148814542752 29.601684459243806 32.684206765466676 17.994959960746765 26 18.503975342870348 31.87214115920903 29.987280808311777 19.636602689608846 27 17.619195975590586 30.978577451302648 32.62096332394876 18.78126324915801 28 16.79779343461049 30.054621068126274 34.587055006931244 18.560530490331985 29 18.023771073604582 27.779553065706295 34.55317527236696 19.643500588322162 30 19.082045932002345 28.852328755377073 33.51466041663689 18.550964895983686 31 21.651513202711524 28.81305646463636 31.092964429136956 18.442465903515163 32 22.45959632048552 28.64356251697083 30.895345347491176 18.001495815052472 33 21.702104144932093 29.209018716743124 30.041625579390146 19.047251558934637 34 19.287001176644324 29.528227554437663 31.65266602832521 19.532105240592802 35 18.801594900890343 29.245146937628324 31.98908150286539 19.964176658615944 36 21.9759431018631 30.17388611797884 29.29276530471277 18.55740547544529 37 19.482371771969188 31.340602803938662 30.681910641723714 18.49511478236844 38 19.70428593886213 31.181303264592536 29.90000905111019 19.214401745435143 39 19.555619072118294 30.328498134994923 29.70071313220814 20.415169660678643 40 21.556790952700805 28.828967363602153 30.36033898789533 19.253902695801713 41 18.219789537869367 28.794630309786157 31.589289202025544 21.39629095031893 42 20.18180345752409 29.825408848174774 29.208732892210804 20.784054802090328 43 20.073323520024392 29.964795945102633 29.37552103430371 20.58635950056927 44 20.024580909779484 31.10237758373468 29.157779905582633 19.715261600903204 45 18.815428808254612 31.55077911003768 28.33106102830139 21.302731053406315 46 19.947732220523154 31.90981283256875 28.789390193360298 19.353064753547798 47 19.64685426283471 30.729186019369376 30.340274105726493 19.28368561206942 48 19.834831530256906 29.935146413616682 30.67045860546211 19.559563450664307 49 19.591194698907675 29.296404803757643 30.541170642009536 20.57122985532515 50 18.417084685045186 30.9829219841939 30.90169065210867 19.69830267865224 51 18.036385462964287 31.217183770883057 30.039739137476833 20.70669162867582 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6823.0 1 8019.0 2 9215.0 3 70599.0 4 131983.0 5 88848.0 6 45713.0 7 42494.0 8 39275.0 9 43005.0 10 46735.0 11 49617.5 12 52500.0 13 52744.5 14 52989.0 15 50508.0 16 48027.0 17 45457.5 18 42888.0 19 40897.5 20 38907.0 21 39305.5 22 39704.0 23 42798.5 24 45893.0 25 52224.0 26 72951.5 27 87348.0 28 96266.5 29 105185.0 30 120772.5 31 136360.0 32 150833.5 33 165307.0 34 187645.0 35 209983.0 36 221282.0 37 232581.0 38 248233.0 39 263885.0 40 288449.0 41 313013.0 42 341645.0 43 370277.0 44 365735.0 45 361193.0 46 360283.5 47 359374.0 48 364729.5 49 370085.0 50 354878.5 51 339672.0 52 315546.0 53 291420.0 54 262274.5 55 233129.0 56 221469.0 57 209809.0 58 192100.0 59 174391.0 60 153434.0 61 132477.0 62 110235.5 63 87994.0 64 70608.5 65 53223.0 66 44446.5 67 35670.0 68 28609.5 69 21549.0 70 17406.0 71 13263.0 72 11064.0 73 8865.0 74 6782.5 75 4262.0 76 3824.0 77 2820.0 78 1816.0 79 1517.0 80 1218.0 81 829.0 82 440.0 83 380.5 84 321.0 85 246.0 86 171.0 87 134.0 88 97.0 89 80.5 90 64.0 91 50.5 92 37.0 93 28.0 94 19.0 95 13.5 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 5247975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.431492435046362 #Duplication Level Percentage of deduplicated Percentage of total 1 80.62705265461338 14.86076911063591 2 7.343452789200969 2.707015890625555 3 2.4328012436530275 1.3452047315508648 4 1.3011555356404707 0.9592895364790414 5 0.8553719606167199 0.7882890910628924 6 0.6735065094979884 0.7448238080859994 7 0.5376302636299255 0.6936529695862867 8 0.4590462922381783 0.6768726610179252 9 0.36019411031836107 0.5975023517533015 >10 3.129062461019362 12.447304899961983 >50 0.8997700593777987 11.94902864160955 >100 1.3694222919637133 48.51111802786863 >500 0.008807650648518454 1.0588119072935516 >1k 0.002411618629950207 0.66318997956943 >5k 2.097059678217571E-4 0.22452911710682008 >10k+ 1.0485298391087854E-4 1.7725972757922746 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 91721 1.747740795259124 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6535 0.12452422124724298 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.71649064639218E-5 0.0 0.0 0.02061747626465446 0.0 2 5.71649064639218E-5 0.0 0.0 0.06255746264035175 0.0 3 5.71649064639218E-5 0.0 0.0 0.10156298381756773 0.0 4 5.71649064639218E-5 0.0 0.0 0.16444438092788172 0.0 5 7.621987528522906E-5 0.0 0.0 0.3124633787317965 0.0 6 7.621987528522906E-5 0.0 0.0 0.5757268279669777 0.0 7 7.621987528522906E-5 0.0 0.0 0.7610363997541909 0.0 8 7.621987528522906E-5 0.0 0.0 1.0634387549483373 0.0 9 7.621987528522906E-5 0.0 0.0 1.2297124128830643 0.0 10 7.621987528522906E-5 0.0 0.0 1.4188139234657178 0.0 11 7.621987528522906E-5 0.0 0.0 1.6073437849837318 0.0 12 7.621987528522906E-5 0.0 0.0 1.7402140825747074 0.0 13 7.621987528522906E-5 0.0 0.0 1.809517004177802 0.0 14 7.621987528522906E-5 0.0 0.0 1.8530957178721317 0.0 15 7.621987528522906E-5 0.0 0.0 1.8889190592561893 0.0 16 7.621987528522906E-5 0.0 0.0 1.9469795492547126 1.9054968821307265E-5 17 7.621987528522906E-5 0.0 0.0 2.022532500631196 1.9054968821307265E-5 18 7.621987528522906E-5 0.0 0.0 2.1167783764213817 1.9054968821307265E-5 19 7.621987528522906E-5 0.0 0.0 2.1794120589370185 1.9054968821307265E-5 20 7.621987528522906E-5 0.0 0.0 2.244808711931745 1.9054968821307265E-5 21 7.621987528522906E-5 0.0 0.0 2.32548744992116 1.9054968821307265E-5 22 7.621987528522906E-5 0.0 0.0 2.427050433738728 1.9054968821307265E-5 23 7.621987528522906E-5 0.0 0.0 2.5266317007988794 1.9054968821307265E-5 24 7.621987528522906E-5 0.0 0.0 2.6078439779152913 1.9054968821307265E-5 25 7.621987528522906E-5 0.0 0.0 2.677890043302417 1.9054968821307265E-5 26 7.621987528522906E-5 0.0 0.0 2.7451540832416312 1.9054968821307265E-5 27 7.621987528522906E-5 0.0 0.0 2.819678066301764 1.9054968821307265E-5 28 7.621987528522906E-5 0.0 0.0 2.899480275725399 1.9054968821307265E-5 29 7.621987528522906E-5 0.0 0.0 2.996794001495815 1.9054968821307265E-5 30 7.621987528522906E-5 0.0 0.0 3.1259866901042783 3.810993764261453E-5 31 7.621987528522906E-5 0.0 0.0 3.2256632320085368 3.810993764261453E-5 32 7.621987528522906E-5 0.0 0.0 3.328312349048919 3.810993764261453E-5 33 7.621987528522906E-5 0.0 0.0 3.4266550431356855 3.810993764261453E-5 34 7.621987528522906E-5 0.0 0.0 3.5294565999266383 3.810993764261453E-5 35 7.621987528522906E-5 0.0 0.0 3.6650136481214184 3.810993764261453E-5 36 9.527484410653633E-5 0.0 0.0 3.7796102306127604 3.810993764261453E-5 37 9.527484410653633E-5 0.0 0.0 3.8971603332714047 3.810993764261453E-5 38 9.527484410653633E-5 0.0 0.0 4.041387392279879 3.810993764261453E-5 39 9.527484410653633E-5 0.0 0.0 4.290169065210867 3.810993764261453E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 36560 0.0 43.522976 1 ATACCCG 80 0.0 42.187504 41 CGCATCG 430 0.0 41.337208 21 CGGTCTA 825 0.0 40.363636 31 CTAAGCG 185 0.0 40.135136 1 CGACGGT 835 0.0 39.880238 28 CGTAAGG 565 0.0 39.82301 2 TAAGGGA 8085 0.0 38.988873 4 ACGGGTA 500 0.0 38.699997 5 GTAGGGA 8635 0.0 38.563984 4 TACGGGA 2285 0.0 38.402626 4 TAGGGAC 7000 0.0 38.282143 5 AGGGACC 5595 0.0 38.203754 6 GACCGAT 2475 0.0 38.0 9 GCGTAAT 30 1.14047674E-4 37.500004 44 TCACGAC 900 0.0 37.5 25 CTACGCA 90 0.0 37.5 23 GGACCGA 2815 0.0 37.48668 8 ACGGTCT 890 0.0 37.41573 30 CTCACGA 910 0.0 37.335163 24 >>END_MODULE