##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547485_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4304664 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.583301507388267 31.0 31.0 33.0 30.0 34.0 2 32.017559094043115 31.0 31.0 34.0 30.0 34.0 3 32.07912998552268 33.0 31.0 34.0 30.0 34.0 4 35.81284439389462 37.0 35.0 37.0 35.0 37.0 5 35.75237347212233 37.0 35.0 37.0 35.0 37.0 6 35.808418496774664 37.0 35.0 37.0 35.0 37.0 7 36.11321278501644 37.0 35.0 37.0 35.0 37.0 8 36.116429760836155 37.0 35.0 37.0 35.0 37.0 9 37.958197201918665 39.0 38.0 39.0 35.0 39.0 10 37.424193154215985 39.0 37.0 39.0 35.0 39.0 11 37.11116152154965 39.0 37.0 39.0 33.0 39.0 12 36.57161000254607 39.0 35.0 39.0 33.0 39.0 13 36.32967985422324 39.0 35.0 39.0 32.0 39.0 14 37.36483985741977 40.0 35.0 41.0 32.0 41.0 15 37.515744550561905 40.0 35.0 41.0 32.0 41.0 16 37.61980935097373 40.0 35.0 41.0 33.0 41.0 17 37.55278391066062 39.0 35.0 41.0 33.0 41.0 18 37.45247875327784 39.0 35.0 41.0 33.0 41.0 19 37.42431883185308 39.0 35.0 41.0 32.0 41.0 20 37.30247447884434 39.0 35.0 41.0 32.0 41.0 21 37.17331224922549 39.0 35.0 41.0 32.0 41.0 22 37.11819970153304 39.0 35.0 41.0 32.0 41.0 23 37.02478706816606 39.0 35.0 41.0 32.0 41.0 24 36.882890279009 39.0 35.0 41.0 32.0 41.0 25 36.74755056376061 38.0 35.0 41.0 31.0 41.0 26 36.729137047630196 38.0 35.0 41.0 31.0 41.0 27 36.69476293620129 38.0 35.0 41.0 31.0 41.0 28 36.65277661624694 38.0 35.0 41.0 31.0 41.0 29 36.5788389058937 38.0 35.0 41.0 31.0 41.0 30 36.50749466160425 38.0 35.0 41.0 31.0 41.0 31 36.42451745362704 38.0 35.0 41.0 30.0 41.0 32 36.29944148950998 38.0 35.0 41.0 30.0 41.0 33 36.20106958406045 38.0 35.0 41.0 30.0 41.0 34 36.042397269566216 38.0 35.0 41.0 30.0 41.0 35 35.86259926442575 38.0 35.0 41.0 29.0 41.0 36 35.7169335399929 38.0 35.0 41.0 28.0 41.0 37 35.66146579616899 38.0 35.0 41.0 28.0 41.0 38 35.50497204892182 38.0 34.0 40.0 27.0 41.0 39 35.40407567234051 38.0 34.0 40.0 27.0 41.0 40 35.22878974990847 38.0 34.0 40.0 26.0 41.0 41 35.133330731504245 38.0 34.0 40.0 26.0 41.0 42 35.104262260654956 38.0 34.0 40.0 26.0 41.0 43 35.005502868516565 38.0 34.0 40.0 25.0 41.0 44 34.86750882298828 37.0 34.0 40.0 25.0 41.0 45 34.75333266429157 37.0 34.0 40.0 24.0 41.0 46 34.7074329146247 37.0 34.0 40.0 24.0 41.0 47 34.60985108245382 37.0 34.0 40.0 24.0 41.0 48 34.459377549560195 36.0 34.0 40.0 23.0 41.0 49 34.35918831295544 36.0 34.0 40.0 24.0 41.0 50 34.24097746072632 36.0 33.0 40.0 24.0 41.0 51 33.86232072932986 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 13.0 11 20.0 12 29.0 13 57.0 14 68.0 15 174.0 16 426.0 17 1063.0 18 2108.0 19 3927.0 20 6948.0 21 10720.0 22 16111.0 23 23471.0 24 32385.0 25 45413.0 26 59480.0 27 69772.0 28 76308.0 29 84827.0 30 98398.0 31 119473.0 32 147220.0 33 191542.0 34 328871.0 35 499148.0 36 299077.0 37 394720.0 38 613411.0 39 1179095.0 40 380.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.828610084317845 22.907200190305215 29.334902793806904 13.929286931570037 2 31.09815307303892 25.652083414640494 29.789874424577622 13.459889087742969 3 29.748082544886195 25.379634740365336 30.880226656482364 13.992056058266103 4 26.573688445834563 27.441026756095248 30.77434150493511 15.210943293135074 5 23.621890117323908 32.51614992482572 29.511548404242465 14.3504115536079 6 22.459406820137414 40.799212203321794 26.410725668716534 10.330655307824257 7 88.4198395043144 3.958984952135637 6.144730459798953 1.47644508375102 8 89.55741958025062 2.875810980833812 5.868820423614944 1.6979490153006136 9 84.74698605977144 5.49109059383032 7.339527545006998 2.422395801391235 10 45.13441699514759 29.047679447222823 14.74800356078895 11.069899996840636 11 36.425723354947095 23.725034056084287 23.487686843851225 16.36155574511739 12 33.67008435501586 21.8509272733017 26.99532414144286 17.483664230239572 13 24.643735260173617 28.915264931246664 28.331549221960177 18.109450586619534 14 19.587243046147158 32.41590981317009 30.377469646876037 17.619377493806716 15 18.61264897794578 25.767028506754535 38.6056379777841 17.01468453751559 16 22.766585266585267 23.140505275208472 35.738677861965535 18.354231596240727 17 22.999309586067575 22.63491413034792 28.64572008407625 25.720056199508257 18 24.193990518191434 24.515293179676743 32.05181635546933 19.238899946662507 19 27.966503308969067 25.455970547294747 26.80027988247166 19.777246261264526 20 28.493420160086824 25.983979237403894 26.40566139424587 19.11693920826341 21 25.494812138647756 25.634358453993155 30.554998020751444 18.31583138660764 22 25.464124493804857 22.725815534034712 28.751396160071955 23.05866381208847 23 22.55095868109567 26.175864132485138 29.02784050044324 22.245336685975957 24 21.46857455076633 25.379379203580115 33.51522906317427 19.636817182479284 25 21.958113339391875 26.70837956226084 31.05494412572038 20.278562972626897 26 20.646907633209004 29.795612386936586 27.289423750610965 22.268056229243445 27 20.546644290936527 29.418300708255046 29.96598573082591 20.069069269982514 28 18.82537173633064 27.909402452781446 33.300415549274 19.964810261613913 29 20.51978969787189 25.920350577884825 32.961132390356134 20.59872733388715 30 22.08973801439555 26.750519901204832 31.367697920209338 19.792044164190283 31 26.268461371201095 26.552897043764624 27.21329701923309 19.96534456580119 32 27.062019242384537 26.170056478275654 27.43308188513668 19.334842394203125 33 26.150078147795043 26.73121525861252 26.93229947796158 20.18640711563086 34 22.018118022684234 26.832059366305945 29.482951514914983 21.666871096094837 35 22.18709752956328 26.902262290390144 29.865699157936596 21.044941022109974 36 27.923294361650523 25.80055028685166 26.637131260418933 19.639024091078884 37 23.08930499569769 28.731022909105103 28.0269261433645 20.15274595183271 38 22.96125783568706 30.107320803667836 25.469560458144937 21.46186090250017 39 22.443517078220275 28.076082128593544 27.266216364389877 22.2141844287963 40 24.066942274704832 25.771395862720066 27.655352427041922 22.506309435533183 41 20.63427017764917 25.20621818567024 28.66393288767718 25.495578749003407 42 22.86956659102778 26.55861177550675 26.91585220124033 23.65596943222514 43 22.502035002035 25.677776476863233 27.93086754273969 23.889320978362075 44 21.600756760574114 27.767602767602767 28.902766859387864 21.728873612435258 45 21.501283259274125 30.004804091562082 26.745037475631083 21.74887517353271 46 22.80749438283685 28.485916670848177 27.168531620586418 21.53805732572856 47 22.740520514493117 27.52728203641446 28.26411074127969 21.468086707812738 48 23.070255889890593 26.4527266239595 29.23203762244858 21.244979863701325 49 22.658400283971062 26.20276518678345 29.227809650184078 21.911024879061408 50 21.969658955960327 28.498623818258523 27.982091052867307 21.549626172913843 51 21.54495681892942 29.11827729179327 27.054585444996405 22.2821804442809 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4822.0 1 7328.5 2 9835.0 3 23402.0 4 36969.0 5 27316.0 6 17663.0 7 17371.0 8 17079.0 9 17903.0 10 18727.0 11 18551.0 12 18375.0 13 18176.0 14 17977.0 15 17304.5 16 16632.0 17 15551.0 18 14470.0 19 15459.0 20 16448.0 21 17915.5 22 19383.0 23 21176.5 24 22970.0 25 28239.5 26 37890.5 27 42272.0 28 50282.5 29 58293.0 30 68204.5 31 78116.0 32 90716.5 33 103317.0 34 112275.0 35 121233.0 36 135495.5 37 149758.0 38 167484.5 39 185211.0 40 211911.0 41 238611.0 42 278340.5 43 318070.0 44 326081.0 45 334092.0 46 328729.0 47 323366.0 48 314716.0 49 306066.0 50 296467.0 51 286868.0 52 278861.0 53 270854.0 54 250961.5 55 231069.0 56 220296.5 57 209524.0 58 199036.0 59 188548.0 60 175599.5 61 162651.0 62 145210.5 63 127770.0 64 111628.0 65 95486.0 66 85475.0 67 75464.0 68 61475.5 69 47487.0 70 42225.0 71 36963.0 72 28933.5 73 20904.0 74 16377.0 75 9602.5 76 7355.0 77 5785.0 78 4215.0 79 3181.0 80 2147.0 81 1734.0 82 1321.0 83 906.5 84 492.0 85 334.0 86 176.0 87 144.5 88 113.0 89 86.5 90 60.0 91 44.0 92 28.0 93 30.5 94 33.0 95 23.0 96 13.0 97 10.5 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4304664.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.101010652029252 #Duplication Level Percentage of deduplicated Percentage of total 1 82.73500979027311 13.321172739289318 2 7.836587538790562 2.5235395887525307 3 2.3349711999226765 1.127861884864096 4 1.0321517023935196 0.6647474221899273 5 0.6220792608749746 0.5008052402877224 6 0.41747510271429666 0.4033062645455938 7 0.3054266764583363 0.34423747197486954 8 0.22593912736496688 0.29102786371308204 9 0.1839596844506128 0.2665743154994931 >10 1.7668727578802716 6.5018009005396715 >50 0.7140520013483256 8.474168210846496 >100 1.8061557460290663 62.67850239155529 >500 0.016414236837811437 1.6047761341531959 >1k 0.0027599159284815693 0.8297638663191297 >5k 0.0 0.0 >10k+ 1.452587330779773E-4 0.4677157054695855 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19998 0.4645658755247796 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.646123367584555E-5 0.0 0.0 0.01324145159761598 0.0 2 4.646123367584555E-5 0.0 0.0 0.05484748635433567 0.0 3 4.646123367584555E-5 0.0 0.0 0.08725419684323794 0.0 4 4.646123367584555E-5 0.0 0.0 0.16561106743755147 0.0 5 4.646123367584555E-5 0.0 0.0 0.2932400763450992 0.0 6 4.646123367584555E-5 0.0 0.0 0.4399646522934194 0.0 7 4.646123367584555E-5 0.0 0.0 0.5199476660663875 0.0 8 4.646123367584555E-5 0.0 0.0 0.6816792204920059 0.0 9 4.646123367584555E-5 0.0 0.0 0.7401739136898954 0.0 10 4.646123367584555E-5 0.0 0.0 0.8577440655066226 0.0 11 4.646123367584555E-5 0.0 0.0 1.0389428768424203 0.0 12 6.969185051376832E-5 0.0 0.0 1.1785124228046602 0.0 13 6.969185051376832E-5 0.0 0.0 1.236635426133143 0.0 14 6.969185051376832E-5 0.0 0.0 1.2604932696256896 0.0 15 6.969185051376832E-5 0.0 0.0 1.2978248708842317 0.0 16 6.969185051376832E-5 0.0 0.0 1.3805026362103987 0.0 17 6.969185051376832E-5 0.0 0.0 1.4735644872631175 0.0 18 6.969185051376832E-5 0.0 0.0 1.5926446291743095 0.0 19 6.969185051376832E-5 0.0 0.0 1.6582711217414414 0.0 20 6.969185051376832E-5 0.0 0.0 1.728148817189913 0.0 21 9.29224673516911E-5 0.0 0.0 1.8231852706738552 0.0 22 9.29224673516911E-5 0.0 0.0 1.9208467838604826 0.0 23 9.29224673516911E-5 0.0 0.0 2.0261047087531106 0.0 24 9.29224673516911E-5 0.0 0.0 2.1052514203199135 0.0 25 1.1615308418961387E-4 0.0 0.0 2.172202058046807 0.0 26 1.1615308418961387E-4 0.0 0.0 2.2423585208973336 0.0 27 1.1615308418961387E-4 0.0 0.0 2.3285441093660273 0.0 28 1.1615308418961387E-4 0.0 0.0 2.4065757513246098 0.0 29 1.1615308418961387E-4 0.0 0.0 2.5023091233136894 0.0 30 1.1615308418961387E-4 0.0 0.0 2.6091467301512963 0.0 31 1.1615308418961387E-4 0.0 0.0 2.70192981380196 0.0 32 1.3938370102753664E-4 0.0 0.0 2.7910889212259073 0.0 33 1.3938370102753664E-4 0.0 0.0 2.88008541433199 0.0 34 1.3938370102753664E-4 0.0 0.0 2.975470327068501 0.0 35 1.3938370102753664E-4 0.0 0.0 3.0907406478182735 0.0 36 1.6261431786545943E-4 0.0 0.0 3.1839418825720194 0.0 37 1.6261431786545943E-4 0.0 0.0 3.2904077995402194 0.0 38 1.6261431786545943E-4 0.0 0.0 3.4179671165972536 0.0 39 1.6261431786545943E-4 0.0 0.0 3.6499248257239123 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGT 40 6.8230293E-9 45.0 38 CGAATCT 45 3.8562575E-10 45.0 37 TCGTAAG 265 0.0 42.45283 1 CGTACCG 80 0.0 42.1875 14 CGTAAGG 705 0.0 41.489365 2 CACGACG 515 0.0 40.631065 26 TACGTCA 40 3.461173E-7 39.375 33 CGTTTTT 10910 0.0 39.122364 1 CGAATAC 35 6.2522868E-6 38.571426 44 CCGCGTA 35 6.2522868E-6 38.571426 24 CGGTCTA 520 0.0 38.509613 31 TTGATCC 1970 0.0 38.489845 17 GGGCGAT 5715 0.0 38.070866 7 CGACGGT 550 0.0 38.045456 28 AGGGCGA 3235 0.0 37.90572 6 TACGCGG 385 0.0 37.4026 2 TACGGGA 1265 0.0 37.173916 4 TAGGGAC 3935 0.0 37.052094 5 TATGGGT 1080 0.0 36.875 4 CGTTAGG 605 0.0 36.818184 2 >>END_MODULE