##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547483_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 291856 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.54301093690039 31.0 31.0 33.0 30.0 34.0 2 31.984464941615045 31.0 31.0 34.0 30.0 34.0 3 32.08494942711474 33.0 31.0 34.0 30.0 34.0 4 35.81749904062277 37.0 35.0 37.0 35.0 37.0 5 35.76858450742832 37.0 35.0 37.0 35.0 37.0 6 35.81975357710652 37.0 35.0 37.0 35.0 37.0 7 36.0870326462365 37.0 35.0 37.0 35.0 37.0 8 36.092891700016445 37.0 35.0 37.0 35.0 37.0 9 37.97892796447563 39.0 38.0 39.0 35.0 39.0 10 37.40269516473877 39.0 37.0 39.0 35.0 39.0 11 37.10144043637958 39.0 37.0 39.0 33.0 39.0 12 36.61902102406666 39.0 35.0 39.0 33.0 39.0 13 36.40646414670248 39.0 35.0 39.0 32.0 39.0 14 37.48632887451346 40.0 35.0 41.0 33.0 41.0 15 37.625585905377996 40.0 35.0 41.0 33.0 41.0 16 37.71681582698317 40.0 35.0 41.0 33.0 41.0 17 37.61059220985692 40.0 35.0 41.0 33.0 41.0 18 37.5281542952689 39.0 36.0 41.0 33.0 41.0 19 37.513989775779834 39.0 36.0 41.0 33.0 41.0 20 37.417836193191164 39.0 35.0 41.0 32.0 41.0 21 37.3018509127789 39.0 35.0 41.0 32.0 41.0 22 37.23825105531495 39.0 35.0 41.0 32.0 41.0 23 37.15177005098405 39.0 35.0 41.0 32.0 41.0 24 37.024364755221754 39.0 35.0 41.0 32.0 41.0 25 36.88944890630996 39.0 35.0 41.0 31.0 41.0 26 36.85704594046379 39.0 35.0 41.0 31.0 41.0 27 36.821901896825835 39.0 35.0 41.0 31.0 41.0 28 36.787124472342526 39.0 35.0 41.0 31.0 41.0 29 36.74523395098953 39.0 35.0 41.0 31.0 41.0 30 36.69099830053177 38.0 35.0 41.0 31.0 41.0 31 36.62876555561647 39.0 35.0 41.0 31.0 41.0 32 36.524834164793596 39.0 35.0 41.0 31.0 41.0 33 36.441464283756375 39.0 35.0 41.0 30.0 41.0 34 36.335045364837455 39.0 35.0 41.0 30.0 41.0 35 36.19030960473658 38.0 35.0 41.0 30.0 41.0 36 36.058319856367525 38.0 35.0 41.0 30.0 41.0 37 36.01639849788937 38.0 35.0 41.0 30.0 41.0 38 35.864899128337264 38.0 35.0 41.0 29.0 41.0 39 35.78191299819089 38.0 35.0 41.0 29.0 41.0 40 35.60712132010306 38.0 35.0 40.0 28.0 41.0 41 35.543463214736036 38.0 35.0 40.0 27.0 41.0 42 35.495275067156406 38.0 35.0 40.0 27.0 41.0 43 35.40163299709446 38.0 34.0 40.0 27.0 41.0 44 35.265254097911296 38.0 34.0 40.0 27.0 41.0 45 35.16024683405515 38.0 34.0 40.0 27.0 41.0 46 35.11925058933173 37.0 34.0 40.0 26.0 41.0 47 35.02891837070336 37.0 34.0 40.0 26.0 41.0 48 34.88024573762404 37.0 34.0 40.0 26.0 41.0 49 34.78248519817993 37.0 34.0 40.0 26.0 41.0 50 34.696651773477335 37.0 34.0 40.0 25.0 41.0 51 34.30234088043419 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 3.0 14 2.0 15 11.0 16 24.0 17 60.0 18 150.0 19 210.0 20 456.0 21 649.0 22 969.0 23 1324.0 24 1835.0 25 2605.0 26 3441.0 27 4173.0 28 4721.0 29 5513.0 30 6341.0 31 7707.0 32 9879.0 33 12898.0 34 21638.0 35 32562.0 36 20573.0 37 27131.0 38 43142.0 39 83807.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.95582753138534 24.265048517076913 29.937366372457653 13.841757579080094 2 29.072898963872596 26.043322734499203 31.148580121703855 13.735198179924346 3 28.721013102351844 25.92614165890028 31.932185735431172 13.420659503316704 4 25.442684063373715 28.19095718436489 31.443245984321035 14.923112767940355 5 23.263184584178497 32.39577051696727 29.7197933227345 14.621251576119732 6 22.27297023189518 41.92752590318513 25.881256510059757 9.91824735485993 7 90.6676580231347 3.1553231730716518 4.792431884216874 1.3845869195767775 8 91.75826434954224 2.3449920508744038 4.474124225645524 1.4226193739378323 9 87.7233978400307 4.412107340606326 5.39204265117044 2.4724521681925333 10 43.2295378542843 29.333301354092427 14.288210624417522 13.148950167205745 11 34.0883860533962 24.740625513952086 24.131420974727263 17.039567457924456 12 32.203209802094186 23.053149498382762 26.70906200317965 18.034578696343402 13 24.340085521627103 28.156351077243574 27.436475522175318 20.067087878954005 14 18.931253768981964 31.881133161559127 29.828065895510115 19.359547173948798 15 18.436146592840306 26.50211062989968 36.94116276519927 18.120580012060742 16 23.271750452277836 24.24380516419056 33.4181925333041 19.06625185022751 17 21.97933227344992 24.010128282440657 28.432514664766185 25.578024779343238 18 24.176306123567787 25.30631544323228 30.50168576284195 20.015692670357986 19 26.92526451400691 26.664862123787074 26.03989638725947 20.36997697494655 20 28.043281618332326 27.151403431829397 25.470780110739543 19.334534839098733 21 25.745915794090234 26.2447919521956 29.336727701332165 18.672564552381996 22 25.086001315717336 23.091524587467795 28.64529082835371 23.17718326846116 23 22.3695932240557 26.831725234362153 28.482881969190288 22.315799572391864 24 21.950208321912175 26.1002000986788 32.458130036730445 19.491461542678582 25 22.12735047420646 26.461679732470806 29.62077188750617 21.790197905816566 26 20.513883559015405 30.422194506880107 26.74435337974892 22.319568554355573 27 20.126363686201415 29.49742338687572 29.298009977523158 21.078202949399703 28 19.079614604462474 27.800010964311166 32.872375418014364 20.247999013211995 29 20.164053505838496 25.91928896442081 32.687695301792665 21.228962227948028 30 21.39034318293953 27.35561372731758 30.91867222191766 20.33537086782523 31 25.933336988103722 25.843909325146647 27.220958280796008 21.001795405953622 32 26.74161230195713 26.34998081245546 27.049983553533245 19.858423332054166 33 24.978756647113645 26.775875774354475 27.050668822981194 21.194698755550682 34 20.98877528644263 27.279891453319443 28.744654898306017 22.98667836193191 35 21.351282824406557 27.30490378816951 29.83354805109369 21.510265336330246 36 26.40685817663505 26.426045721177566 26.934173016830215 20.232923085357164 37 22.07698316978236 28.908776931089303 27.539265939367358 21.47497395976098 38 22.47238364124774 29.73863823255304 25.830889205635653 21.958088920563565 39 21.624705334137385 28.891645194890632 26.43529685872485 23.048352612247136 40 23.49549092703251 26.856737569212214 27.325119236883943 22.322652266871334 41 21.159064744257442 25.563976755660327 28.554149991776768 24.722808508305466 42 23.19705608245162 26.560015898251194 26.538087275916887 23.7048407433803 43 22.076297900334414 26.13788991831588 27.93329587193685 23.85251630941286 44 21.3804067759443 27.672208212269062 28.20363466915191 22.743750342634726 45 20.694452058549423 30.16556109862398 26.2797406940409 22.860246148785702 46 21.96734005811085 29.074612137492462 26.937941998793924 22.020105805602764 47 21.64149443561208 27.680774080368405 28.3341784989858 22.343552985033714 48 22.27468340551505 26.8762677484787 28.685379091058604 22.163669754947644 49 22.16709610218738 26.860506551175924 29.21851872156132 21.75387862507538 50 21.59489611315169 28.45067430513678 27.783907132284412 22.170522449427114 51 20.19523326572008 30.437955704182883 27.049640918809274 22.31717011128776 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 406.0 1 499.5 2 593.0 3 1305.0 4 2017.0 5 1464.5 6 912.0 7 921.5 8 931.0 9 993.5 10 1056.0 11 1037.0 12 1018.0 13 1005.0 14 992.0 15 924.5 16 857.0 17 814.5 18 772.0 19 878.0 20 984.0 21 1203.5 22 1423.0 23 1474.0 24 1525.0 25 1757.5 26 2481.0 27 2972.0 28 3623.5 29 4275.0 30 4959.0 31 5643.0 32 6452.0 33 7261.0 34 7852.5 35 8444.0 36 9428.5 37 10413.0 38 11649.5 39 12886.0 40 14502.0 41 16118.0 42 18541.0 43 20964.0 44 21639.5 45 22315.0 46 22206.5 47 22098.0 48 22303.5 49 22509.0 50 21887.5 51 21266.0 52 20299.5 53 19333.0 54 18005.0 55 16677.0 56 15481.5 57 14286.0 58 13540.5 59 12795.0 60 11593.0 61 10391.0 62 9049.5 63 7708.0 64 6844.0 65 5980.0 66 5077.0 67 4174.0 68 3478.5 69 2783.0 70 2350.5 71 1918.0 72 1614.5 73 1311.0 74 1049.5 75 641.5 76 495.0 77 381.0 78 267.0 79 208.0 80 149.0 81 109.5 82 70.0 83 49.0 84 28.0 85 33.5 86 39.0 87 23.5 88 8.0 89 7.0 90 6.0 91 6.5 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 291856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.756304478921113 #Duplication Level Percentage of deduplicated Percentage of total 1 69.63670809155576 20.024943807905267 2 5.886067654032671 3.385231072857848 3 3.251635349768251 2.805150485170769 4 2.334171363208503 2.684885697056082 5 2.0041226303811643 2.881558028616852 6 1.7217343643880993 2.9706430568499536 7 1.5358585437344359 3.091593114412587 8 1.3988347015859022 3.218025327558796 9 1.2344060910076613 3.194726166328601 >10 10.95714132519928 54.455621950550956 >50 0.03336232678399085 0.6218820240118414 >100 0.004766046683427264 0.2888410723096322 >500 0.0 0.0 >1k 0.001191511670856816 0.376898196370813 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1100 0.376898196370813 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 293 0.10039197412422564 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02055808343840798 0.0 2 0.0 0.0 0.0 0.0681843100707198 0.0 3 0.0 0.0 0.0 0.10930047694753577 0.0 4 0.0 0.0 0.0 0.19119017597719423 0.0 5 0.0 0.0 0.0 0.346061071213201 0.0 6 0.0 0.0 0.0 0.5492434625294665 0.0 7 0.0 0.0 0.0 0.6451811852420372 0.0 8 0.0 0.0 0.0 0.8689216599967107 0.0 9 0.0 0.0 0.0 0.9597198618496793 0.0 10 0.0 0.0 0.0 1.134463571076147 0.0 11 0.0 0.0 0.0 1.3191436872978455 0.0 12 0.0 0.0 0.0 1.4479743435118688 0.0 13 0.0 0.0 0.0 1.508278054931199 0.0 14 0.0 0.0 0.0 1.5312345814374213 0.0 15 0.0 0.0 0.0 1.5675538621786087 0.0 16 0.0 0.0 0.0 1.6350529028013816 0.0 17 0.0 0.0 0.0 1.7148867934871992 0.0 18 0.0 0.0 0.0 1.8049997258922208 0.0 19 0.0 0.0 0.0 1.8553670303163203 0.0 20 0.0 0.0 0.0 1.9173839153555179 0.0 21 0.0 0.0 0.0 2.0023573269009374 0.0 22 0.0 0.0 0.0 2.1020640315772163 0.0 23 0.0 0.0 0.0 2.1949180417740255 0.0 24 0.0 0.0 0.0 2.272696124116002 0.0 25 0.0 0.0 0.0 2.3329998355353325 0.0 26 0.0 0.0 0.0 2.3953593552985035 0.0 27 0.0 0.0 0.0 2.4621731264733295 0.0 28 3.426347239734664E-4 0.0 0.0 2.5344690532317307 0.0 29 3.426347239734664E-4 0.0 0.0 2.621155638397018 0.0 30 3.426347239734664E-4 0.0 0.0 2.717778630557535 0.0 31 3.426347239734664E-4 0.0 0.0 2.8082341976865304 0.0 32 3.426347239734664E-4 0.0 0.0 2.8884107230963214 0.0 33 3.426347239734664E-4 0.0 0.0 2.97920892494929 0.0 34 3.426347239734664E-4 0.0 0.0 3.066580779562524 0.0 35 3.426347239734664E-4 0.0 0.0 3.1690285620305905 0.0 36 3.426347239734664E-4 0.0 0.0 3.2574283208157446 0.0 37 3.426347239734664E-4 0.0 0.0 3.3547365824242092 0.0 38 3.426347239734664E-4 0.0 0.0 3.47739981360671 0.0 39 3.426347239734664E-4 0.0 0.0 3.7192999287319775 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 25 3.8836304E-5 45.000004 3 ATTAACG 35 1.2077726E-7 45.0 1 TAACGAG 20 7.0246286E-4 45.0 1 CGGGGTA 45 3.8198777E-10 45.0 6 TGCATAC 20 7.0246286E-4 45.0 35 GCGATAT 20 7.0246286E-4 45.0 9 CCTATCC 20 7.0246286E-4 45.0 20 CGGGTAC 30 2.159919E-6 44.999996 6 CGAGGGT 30 2.159919E-6 44.999996 4 GCGATCA 30 2.159919E-6 44.999996 9 TAGGGTG 95 0.0 42.63158 5 TACGGGA 90 0.0 42.5 4 ACGGGAG 135 0.0 41.666664 5 TTAACGG 65 0.0 41.53846 2 CGTTTTT 585 0.0 41.153847 1 AGGGCGA 230 0.0 41.086956 6 CGAAAGG 55 6.002665E-11 40.909092 2 TAGACGG 55 6.002665E-11 40.909092 2 TATTGCG 55 6.002665E-11 40.909092 1 CGAGGGC 105 0.0 40.714287 4 >>END_MODULE