##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547482_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3077626 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.545462639060105 31.0 31.0 33.0 30.0 34.0 2 31.981592305237868 31.0 31.0 34.0 30.0 34.0 3 32.07513875955038 33.0 31.0 34.0 30.0 34.0 4 35.80301310165693 37.0 35.0 37.0 35.0 37.0 5 35.7530970299835 37.0 35.0 37.0 35.0 37.0 6 35.80482846193787 37.0 35.0 37.0 35.0 37.0 7 36.09245210431677 37.0 35.0 37.0 35.0 37.0 8 36.08976171893531 37.0 35.0 37.0 35.0 37.0 9 37.94203454220883 39.0 38.0 39.0 35.0 39.0 10 37.41151816367551 39.0 37.0 39.0 35.0 39.0 11 37.09330925849989 39.0 37.0 39.0 33.0 39.0 12 36.60902721773211 39.0 35.0 39.0 33.0 39.0 13 36.39506684697881 39.0 35.0 39.0 32.0 39.0 14 37.52955817243551 40.0 35.0 41.0 33.0 41.0 15 37.64568761766375 40.0 35.0 41.0 33.0 41.0 16 37.71923034182841 40.0 35.0 41.0 33.0 41.0 17 37.62383311032595 40.0 35.0 41.0 33.0 41.0 18 37.50446285546067 39.0 36.0 41.0 32.0 41.0 19 37.484414935408005 39.0 36.0 41.0 32.0 41.0 20 37.385397705894086 39.0 35.0 41.0 32.0 41.0 21 37.2510704679516 39.0 35.0 41.0 32.0 41.0 22 37.17862046915382 39.0 35.0 41.0 32.0 41.0 23 37.07676663766163 39.0 35.0 41.0 32.0 41.0 24 36.93381521991301 39.0 35.0 41.0 31.0 41.0 25 36.80335199923577 38.0 35.0 41.0 31.0 41.0 26 36.76416465158535 39.0 35.0 41.0 31.0 41.0 27 36.71017433567302 39.0 35.0 41.0 31.0 41.0 28 36.69708177666812 38.0 35.0 41.0 31.0 41.0 29 36.62626420494238 38.0 35.0 41.0 31.0 41.0 30 36.56719594908543 38.0 35.0 41.0 31.0 41.0 31 36.49049527135526 38.0 35.0 41.0 30.0 41.0 32 36.3704559943281 38.0 35.0 41.0 30.0 41.0 33 36.276442621683074 38.0 35.0 41.0 30.0 41.0 34 36.140544367639215 38.0 35.0 41.0 30.0 41.0 35 35.9648189871024 38.0 35.0 41.0 29.0 41.0 36 35.855583491951265 38.0 35.0 41.0 29.0 41.0 37 35.80598097364657 38.0 35.0 41.0 29.0 41.0 38 35.66179873707851 38.0 35.0 41.0 28.0 41.0 39 35.56939667133044 38.0 35.0 40.0 28.0 41.0 40 35.400683838777034 38.0 34.0 40.0 27.0 41.0 41 35.3139517277278 38.0 34.0 40.0 27.0 41.0 42 35.263766942442 38.0 34.0 40.0 27.0 41.0 43 35.1583990387396 38.0 34.0 40.0 26.0 41.0 44 35.00151870305229 37.0 34.0 40.0 26.0 41.0 45 34.87689309877159 37.0 34.0 40.0 26.0 41.0 46 34.81582459987016 37.0 34.0 40.0 25.0 41.0 47 34.72125105519644 37.0 34.0 40.0 25.0 41.0 48 34.56228534591273 36.0 34.0 40.0 24.0 41.0 49 34.45509200923049 36.0 34.0 40.0 24.0 41.0 50 34.34523948004078 36.0 33.0 40.0 24.0 41.0 51 33.96623176435343 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 10.0 11 14.0 12 31.0 13 41.0 14 83.0 15 150.0 16 352.0 17 708.0 18 1471.0 19 2759.0 20 4602.0 21 7177.0 22 10701.0 23 15521.0 24 21653.0 25 29963.0 26 39508.0 27 46865.0 28 52316.0 29 59612.0 30 70363.0 31 84560.0 32 105124.0 33 136363.0 34 230883.0 35 344075.0 36 226022.0 37 296706.0 38 451517.0 39 838255.0 40 216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.461904078013376 24.02263952799983 29.701919596468183 13.813536797518609 2 29.854829664163223 25.320133115589744 31.000452946524366 13.824584273722667 3 29.765670032681037 24.658649231583045 31.548115333052163 14.027565402683756 4 25.68073573592113 28.134250230534835 30.947879956823865 15.237134076720174 5 23.725494910687654 33.097913781596596 28.65699081044935 14.5196004972664 6 22.89758404692448 41.25540270325244 25.334917238156944 10.512096011666134 7 89.93789368818693 3.444830528465772 5.2110945254556595 1.4061812578916346 8 90.78695721962318 2.6359603148660686 4.9386767592943395 1.638405706216415 9 86.19949272588677 4.804774849185703 6.5487164457279725 2.447015979199552 10 45.15340720412422 31.11391702565549 12.678863513630311 11.053812256589982 11 35.463275914617306 23.447195988076526 23.638967177948196 17.450560919357972 12 32.53842409701504 20.771107340528054 27.353096185176497 19.33737237728041 13 25.124365338738365 27.591981611800787 27.841622081435496 19.442030968025353 14 20.384283210500563 30.636601068485902 29.666600165192264 19.31251555582127 15 19.006467972391707 25.126054952746046 37.397364072177716 18.47011300268454 16 24.127493074207198 22.436741826329776 34.70558150990406 18.730183589558965 17 23.774201283716735 22.19376233499457 27.905892398881477 26.126143982407218 18 24.066082103543447 24.698842549419588 30.473390853859435 20.761684493177533 19 28.500019170620472 25.14746756103568 26.05647989716749 20.296033371176357 20 29.685153426699674 25.824775330075845 25.121700947418564 19.368370295805924 21 27.43143578849412 25.1753461921624 28.344899607684624 19.048318411658858 22 26.21029975702051 22.987815933450005 27.056146523326746 23.745737786202742 23 23.77871775192957 26.7756381054748 26.93998556029875 22.505658582296874 24 22.855701115080258 25.443214997533815 31.635260424755963 20.06582346262996 25 23.58753142844517 25.50134421791342 29.03036301356955 21.88076134007186 26 22.13998711994245 29.252189837231686 25.518597776337998 23.08922526648787 27 21.453029055512268 28.820785891463096 28.405010875265546 21.32117417775909 28 20.559223245449576 26.86898927939912 31.803117077903554 20.76867039724775 29 21.165209807819405 25.484740511030257 31.46717632356888 21.882873357581463 30 22.805175157735217 25.810316133279354 30.74236440685125 20.642144302134177 31 27.399430600079413 25.40630342998142 26.27206814603204 20.92219782390713 32 28.517435191930403 25.527208309261752 25.613183668191002 20.342172830616846 33 26.108240572441225 25.461475825847586 26.382282967456085 22.048000634255104 34 22.485123273588147 26.41977940139575 28.033263300998883 23.061834024017212 35 22.61242919055142 26.01872352261126 29.15955350000292 22.209293786834397 36 27.648161277556145 25.049177515396607 27.01722041599597 20.285440791051286 37 23.2381387472032 27.85991540232634 28.076770861696644 20.825174988773814 38 23.329962770005192 29.217260316880612 25.66059033813725 21.792186574976945 39 22.70811983002483 27.802371048334006 26.443596460388623 23.045912661252537 40 24.55392565568396 24.831022352943467 27.186214309341032 23.42883768203154 41 21.47548142626817 24.788489569557832 28.047202616562245 25.68882638761175 42 23.75057918018629 26.200519491322204 25.398277763444945 24.650623565046565 43 23.267154618527396 25.362860854437802 26.702042418409516 24.667942108625283 44 21.613184967894085 26.82964076856642 28.198390577672534 23.358783685866964 45 21.6764155228738 29.17160824609618 26.0552451792388 23.09673105179122 46 23.542464224048015 28.077160772621497 26.713349835230144 21.66702516810035 47 23.08916028133373 26.81488913857629 26.633158155019487 23.462792425070493 48 23.314788736513144 25.848527403914577 28.253530480961626 22.583153378610657 49 22.884716986404456 25.022046213542517 29.522917989385324 22.570318810667704 50 22.26193176168904 27.541260698993312 28.049931993036193 22.146875546281453 51 21.1358690107245 28.19835808509546 27.58161647971521 23.08415642446483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3189.0 1 4720.0 2 6251.0 3 15007.5 4 23764.0 5 17475.5 6 11187.0 7 10832.0 8 10477.0 9 10969.5 10 11462.0 11 11163.5 12 10865.0 13 10877.0 14 10889.0 15 10451.5 16 10014.0 17 9934.5 18 9855.0 19 9570.5 20 9286.0 21 10562.0 22 11838.0 23 13178.5 24 14519.0 25 15096.0 26 20861.5 27 26050.0 28 34070.0 29 42090.0 30 46431.5 31 50773.0 32 61023.0 33 71273.0 34 73997.5 35 76722.0 36 84187.0 37 91652.0 38 102325.5 39 112999.0 40 137428.0 41 161857.0 42 184344.0 43 206831.0 44 219008.0 45 231185.0 46 228318.5 47 225452.0 48 221787.5 49 218123.0 50 207224.5 51 196326.0 52 191939.5 53 187553.0 54 177241.5 55 166930.0 56 170456.5 57 173983.0 58 164418.5 59 154854.0 60 146170.0 61 137486.0 62 126049.5 63 114613.0 64 100098.5 65 85584.0 66 73776.5 67 61969.0 68 53117.5 69 44266.0 70 36228.0 71 28190.0 72 24330.5 73 20471.0 74 17130.5 75 10596.5 76 7403.0 77 6116.5 78 4830.0 79 3638.0 80 2446.0 81 1788.5 82 1131.0 83 868.0 84 605.0 85 541.0 86 477.0 87 331.0 88 185.0 89 168.5 90 152.0 91 98.0 92 44.0 93 37.0 94 30.0 95 21.5 96 13.0 97 9.5 98 6.0 99 9.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3077626.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.07129894446234 #Duplication Level Percentage of deduplicated Percentage of total 1 82.59311950453922 14.099718338176922 2 6.963773570014216 2.377613207905169 3 2.008190025126049 1.0284723676864238 4 0.9396626644387975 0.6416504900633886 5 0.5740936042966114 0.4900261770525662 6 0.42059016188913145 0.4308012232025505 7 0.3279706000454704 0.3919218910859644 8 0.2508789383687076 0.34262634846092405 9 0.2076751293123888 0.31907557942394965 >10 2.5500542954177736 10.762111237703808 >50 1.3753586791319972 17.326081871639428 >100 1.780391164624214 50.095628279696946 >500 0.005558330722484378 0.6240680693353693 >1k 0.0024916654962861004 0.6388247777331174 >5k 0.0 0.0 >10k+ 1.9166657663739235E-4 0.4313801408335085 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13184 0.4283821361010077 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018163350582559416 0.0 2 0.0 0.0 0.0 0.06621987207022556 0.0 3 0.0 0.0 0.0 0.09383856258037851 0.0 4 0.0 0.0 0.0 0.16434745482394547 0.0 5 0.0 0.0 0.0 0.2766418011805203 0.0 6 0.0 0.0 0.0 0.44888495223266245 0.0 7 0.0 0.0 0.0 0.5288166918267522 0.0 8 0.0 0.0 0.0 0.7347546453012809 0.0 9 0.0 0.0 0.0 0.8139715481998138 0.0 10 0.0 0.0 0.0 0.952000015596437 0.0 11 0.0 0.0 0.0 1.1186869359694778 0.0 12 0.0 0.0 0.0 1.2486572442525505 0.0 13 0.0 0.0 0.0 1.3048369100079087 0.0 14 0.0 0.0 0.0 1.3282640580759326 0.0 15 0.0 0.0 0.0 1.3583521844434638 0.0 16 0.0 0.0 0.0 1.4198931254154987 0.0 17 0.0 0.0 0.0 1.4969005330732195 0.0 18 0.0 0.0 0.0 1.5966852372575484 0.0 19 0.0 0.0 0.0 1.654619502174728 0.0 20 0.0 0.0 0.0 1.7198645969328308 0.0 21 0.0 0.0 0.0 1.8020708169218742 0.0 22 0.0 0.0 0.0 1.8948046318818466 0.0 23 0.0 0.0 0.0 1.9928022443272835 0.0 24 0.0 0.0 0.0 2.0685099489021734 0.0 25 0.0 0.0 0.0 2.130180860182491 0.0 26 0.0 0.0 0.0 2.189122394988865 0.0 27 0.0 0.0 0.0 2.2550173412883825 0.0 28 0.0 0.0 0.0 2.322926827366288 0.0 29 0.0 0.0 0.0 2.3988294874036025 0.0 30 0.0 0.0 0.0 2.4926355574069103 0.0 31 0.0 0.0 0.0 2.575914032439289 0.0 32 0.0 0.0 0.0 2.656658086460148 0.0 33 0.0 0.0 0.0 2.7402289946861638 0.0 34 0.0 0.0 0.0 2.8265942645402657 0.0 35 0.0 0.0 0.0 2.931837721672484 0.0 36 0.0 0.0 0.0 3.0194702020323456 0.0 37 0.0 0.0 0.0 3.1159406633554565 0.0 38 0.0 0.0 0.0 3.218292281128376 0.0 39 0.0 0.0 0.0 3.3657435958755224 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 35 1.2128112E-7 45.0 45 CGTACGT 20 7.0351333E-4 45.0 15 TATAGCG 205 0.0 43.90244 1 CGGGATA 540 0.0 42.500004 6 CGGTCTA 430 0.0 41.860466 31 TAGGGTA 1265 0.0 40.90909 5 CGTTTTT 6835 0.0 39.897587 1 ACGGGAT 1010 0.0 39.87624 5 CGTTAGG 455 0.0 39.56044 2 CGACATA 40 3.4607365E-7 39.375 23 ACCGTTC 920 0.0 39.130436 45 CGTCATA 575 0.0 39.130436 38 TACGACG 75 0.0 39.0 1 GTAATCG 35 6.2517065E-6 38.571426 2 TAGGGAC 2780 0.0 38.52518 5 TCACGAC 480 0.0 38.437496 25 CGACGGT 470 0.0 38.29787 28 GTTGATC 2280 0.0 38.289474 16 CGGTAGT 1220 0.0 37.807377 12 GGGCGAT 4175 0.0 37.778442 7 >>END_MODULE