SRR1547481_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547481_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2596760
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11586	0.4461713828001047	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4311	0.16601457200511407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTACGA	30	2.166562E-6	45.000004	18
TTACGAT	30	2.166562E-6	45.000004	19
CCGTTTA	45	3.8562575E-10	45.000004	44
CGATACG	45	3.8562575E-10	45.000004	10
TATCCGT	45	3.8562575E-10	45.000004	41
ACTATCC	20	7.0349296E-4	45.0	43
GGCGTAA	50	2.1827873E-11	45.0	35
ATCACGC	20	7.0349296E-4	45.0	17
CATTACG	20	7.0349296E-4	45.0	19
CCGTACT	25	3.892168E-5	45.0	19
TACGATA	20	7.0349296E-4	45.0	17
TACGACT	20	7.0349296E-4	45.0	20
CGAATCG	25	3.892168E-5	45.0	43
GCGATCG	20	7.0349296E-4	45.0	9
ACCGTAT	40	6.8212103E-9	45.0	13
GTACGAA	20	7.0349296E-4	45.0	38
CCCGATA	20	7.0349296E-4	45.0	33
CCGTTAT	65	0.0	44.999996	25
TACGCAC	65	0.0	41.53846	30
CGGGTAT	245	0.0	41.32653	6