##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547481_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2596760 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6153310278963 31.0 31.0 33.0 30.0 34.0 2 32.054220644187374 33.0 31.0 34.0 30.0 34.0 3 32.14109351653599 33.0 31.0 34.0 30.0 34.0 4 35.866026895053835 37.0 35.0 37.0 35.0 37.0 5 35.808646929250294 37.0 35.0 37.0 35.0 37.0 6 35.86492090143101 37.0 35.0 37.0 35.0 37.0 7 36.1180097506123 37.0 35.0 37.0 35.0 37.0 8 36.113058965788134 37.0 35.0 37.0 35.0 37.0 9 37.99287650764799 39.0 39.0 39.0 35.0 39.0 10 37.50392835687549 39.0 37.0 39.0 35.0 39.0 11 37.16636385341734 39.0 37.0 39.0 34.0 39.0 12 36.442830681310554 38.0 35.0 39.0 33.0 39.0 13 36.12276336665691 38.0 35.0 39.0 32.0 39.0 14 37.07877277838537 39.0 35.0 41.0 32.0 41.0 15 37.290277114558144 39.0 35.0 41.0 32.0 41.0 16 37.42560999091175 39.0 35.0 41.0 33.0 41.0 17 37.38660484603891 39.0 35.0 41.0 33.0 41.0 18 37.3021480614304 39.0 35.0 41.0 33.0 41.0 19 37.26594910580878 39.0 35.0 41.0 32.0 41.0 20 37.11481808099324 39.0 35.0 41.0 32.0 41.0 21 36.99237318812674 39.0 35.0 41.0 32.0 41.0 22 36.953359571157904 38.0 35.0 41.0 32.0 41.0 23 36.87954142854942 38.0 35.0 41.0 32.0 41.0 24 36.75456954050432 38.0 35.0 41.0 32.0 41.0 25 36.61281712595696 38.0 35.0 41.0 31.0 41.0 26 36.574468953619125 38.0 35.0 41.0 31.0 41.0 27 36.53329495217117 38.0 35.0 41.0 31.0 41.0 28 36.52727398758453 38.0 35.0 41.0 31.0 41.0 29 36.45019601349374 38.0 35.0 40.0 31.0 41.0 30 36.418723717247644 38.0 35.0 40.0 31.0 41.0 31 36.31503103867897 38.0 35.0 41.0 31.0 41.0 32 36.185629014618215 38.0 35.0 41.0 30.0 41.0 33 36.09483587239483 38.0 35.0 41.0 30.0 41.0 34 35.97285270876015 38.0 35.0 41.0 30.0 41.0 35 35.78191400052373 38.0 35.0 41.0 30.0 41.0 36 35.61872140667601 38.0 35.0 40.0 29.0 41.0 37 35.545514795360376 38.0 34.0 40.0 29.0 41.0 38 35.37690814707559 38.0 34.0 40.0 27.0 41.0 39 35.28836203576765 37.0 34.0 40.0 27.0 41.0 40 35.06211124632234 37.0 34.0 40.0 26.0 41.0 41 35.01230148338699 37.0 34.0 40.0 26.0 41.0 42 34.98068708698532 37.0 34.0 40.0 26.0 41.0 43 34.89811418845022 37.0 34.0 40.0 26.0 41.0 44 34.78244196614242 37.0 34.0 40.0 26.0 41.0 45 34.68864200003081 36.0 34.0 40.0 25.0 41.0 46 34.6748344090328 36.0 34.0 40.0 25.0 41.0 47 34.58053535944793 36.0 34.0 40.0 25.0 41.0 48 34.447200357368416 36.0 34.0 40.0 24.0 41.0 49 34.333269150787906 36.0 34.0 40.0 24.0 41.0 50 34.21825390101511 35.0 34.0 40.0 24.0 41.0 51 33.85963007748117 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 11.0 11 12.0 12 13.0 13 33.0 14 58.0 15 127.0 16 262.0 17 609.0 18 1219.0 19 2424.0 20 3931.0 21 6408.0 22 9608.0 23 13587.0 24 19093.0 25 26703.0 26 35061.0 27 41562.0 28 45449.0 29 51010.0 30 59172.0 31 71831.0 32 89611.0 33 118646.0 34 220692.0 35 359469.0 36 168246.0 37 223277.0 38 344336.0 39 684039.0 40 257.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.889369830095966 23.893313205687086 29.973929050046983 13.243387914169965 2 29.54008071596913 25.588425576487623 31.381490780819178 13.49000292672407 3 29.431252791940725 24.925946179084704 31.450692401300085 14.192108627674488 4 25.786249018007055 27.81127250881868 31.041798240884795 15.36068023228947 5 23.3739737210986 33.01787612255272 29.497296631186554 14.110853525162126 6 22.624809377840077 42.07797409079006 24.809300821023122 10.48791571034674 7 89.6052773456153 3.739275096658914 5.2487715460805004 1.406676011645281 8 90.54918436821269 2.732559035105285 5.092615413053189 1.6256411836288298 9 86.49798210077174 4.908462853710008 6.334201081347525 2.2593539641707356 10 48.88572682881745 28.510528504752074 12.582679955020874 10.021064711409602 11 41.45007624886397 22.426215745775504 21.758036938338545 14.365671067021982 12 38.76711748486576 20.98665259785271 24.32307952987569 15.923150387405844 13 25.037931884348186 31.14565843589704 26.535836966065407 17.280572713689367 14 18.262950754016543 35.32259430983225 29.285070626472994 17.129384309678215 15 17.097999044963725 24.93153006053698 41.970416981161144 16.00005391333816 16 21.794659498759994 21.22456445724672 39.19615212803647 17.784623915956807 17 21.790577488870746 21.319259384771794 28.141915309847654 28.748247816509803 18 23.68385988693603 24.91585668294336 31.12609559605046 20.274187834070148 19 28.78306042915017 25.82279455937399 25.668448374127763 19.72569663734808 20 29.38119040650657 26.951585822332447 25.370654199849042 18.296569571311945 21 25.39568539256612 25.00581493861581 29.80968591629569 19.788813752522376 22 24.806220058842555 23.56582818589319 27.581948274002986 24.046003481261263 23 21.652559343181505 28.046796777522758 27.366256411836286 22.934387467459448 24 21.89798056039064 25.679423589396016 33.13644695697715 19.286148893236188 25 22.439347494570157 26.199802831220442 30.371501409448697 20.9893482647607 26 19.73170412360018 30.523537023059504 26.265423065666443 23.47933578767387 27 19.490095349589488 31.45723902093378 28.811441950738615 20.24122367873812 28 17.67402455367458 29.30563471402825 33.50471356613626 19.51562716616091 29 18.537408154777495 26.208120889107967 33.44475423219704 21.809716723917496 30 20.787327284770253 28.13197985181534 31.262188265376857 19.818504598037553 31 27.190961043762226 26.5153113880374 26.869830095965742 19.42389747223463 32 29.30189928988432 25.846054313837243 26.24801675934626 18.604029636932175 33 26.732582140821638 26.652482324126993 26.318989818080997 20.29594571697038 34 21.754494061830897 27.34368982886366 28.55920454720498 22.342611562100466 35 21.600301914693695 27.630239221183324 28.93055191854465 21.838906945578337 36 29.666083889154176 25.47281997566198 25.646767510282043 19.2143286249018 37 21.958748594402255 30.122652844313684 28.57430028188974 19.344298279394323 38 22.865301375560314 30.39295121613087 24.874458941142038 21.867288467166777 39 21.528019532032225 28.586700349666504 27.32470463192594 22.560575486375328 40 24.43833854495602 25.53285632865571 26.694342180255394 23.334462946132874 41 19.744027172322433 24.972350159429443 28.668417566505955 26.615205101742173 42 23.40458879526795 25.585883947688657 26.219981823503137 24.78954543354026 43 21.980891572575057 26.32253269458864 27.36702660238143 24.329549130454875 44 20.925499468568525 29.34187217917713 27.626657835148414 22.105970517105934 45 19.296507956068332 31.888853802430724 25.177875506400284 23.636762735100664 46 22.34018546188327 30.307999199001834 25.96366241008025 21.388152929034643 47 21.73916726998259 27.99361512038078 27.89141083504059 22.375806774596036 48 23.21974306443414 25.754324619910967 28.896201420231364 22.129730895423528 49 22.215645650733993 25.829379688534942 29.728623361419615 22.22635129931145 50 20.877170011860933 29.836064942466766 27.57074200157119 21.71602304410111 51 19.130685931699503 30.966858700842586 26.366125479443614 23.536329888014297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2832.0 1 4249.5 2 5667.0 3 12992.5 4 20318.0 5 14868.5 6 9419.0 7 9530.5 8 9642.0 9 9807.5 10 9973.0 11 9937.5 12 9902.0 13 9687.5 14 9473.0 15 9210.5 16 8948.0 17 8601.5 18 8255.0 19 8654.0 20 9053.0 21 9669.0 22 10285.0 23 11302.0 24 12319.0 25 15232.5 26 19880.5 27 21615.0 28 25017.0 29 28419.0 30 38529.5 31 48640.0 32 57325.0 33 66010.0 34 71196.5 35 76383.0 36 80154.0 37 83925.0 38 92064.5 39 100204.0 40 126617.0 41 153030.0 42 182039.5 43 211049.0 44 216398.5 45 221748.0 46 216107.5 47 210467.0 48 197570.0 49 184673.0 50 174803.5 51 164934.0 52 152026.5 53 139119.0 54 136877.0 55 134635.0 56 133995.0 57 133355.0 58 127400.0 59 121445.0 60 111951.0 61 102457.0 62 90845.5 63 79234.0 64 68143.5 65 57053.0 66 49061.0 67 41069.0 68 33048.0 69 25027.0 70 21006.0 71 16985.0 72 14441.5 73 11898.0 74 10397.5 75 7313.0 76 5729.0 77 3858.5 78 1988.0 79 1555.5 80 1123.0 81 964.0 82 805.0 83 553.5 84 302.0 85 235.0 86 168.0 87 120.0 88 72.0 89 51.5 90 31.0 91 23.0 92 15.0 93 16.0 94 17.0 95 10.5 96 4.0 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2596760.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.534260296244057 #Duplication Level Percentage of deduplicated Percentage of total 1 82.92767429010408 13.711477524747268 2 7.63272926264234 2.524030647985748 3 2.204570887725259 1.0935284669751377 4 0.9845119871782878 0.6511270984311319 5 0.5857236679502874 0.48422537937804366 6 0.40446148192866493 0.40124828532078943 7 0.2953305746997157 0.3418150816867113 8 0.23969419696229863 0.3170532995259069 9 0.19191370796732474 0.2855836081754202 >10 1.9137955888232792 7.127266600052675 >50 0.7870994471615597 9.56788945971567 >100 1.8208170142604463 61.44136944751043 >500 0.00910875622528089 0.9836538333328972 >1k 0.0023355785193027927 0.6223139731532521 >5k 0.0 0.0 >10k+ 2.3355785193027924E-4 0.4474172940089097 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11586 0.4461713828001047 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4311 0.16601457200511407 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.701905451408678E-5 0.0 0.0 0.0306150741693495 0.0 2 7.701905451408678E-5 0.0 0.0 0.08368120272955529 0.0 3 7.701905451408678E-5 0.0 0.0 0.11957208213311973 0.0 4 7.701905451408678E-5 0.0 0.0 0.21630801460281274 0.0 5 7.701905451408678E-5 0.0 0.0 0.35401808407399993 0.0 6 7.701905451408678E-5 0.0 0.0 0.5374004528720405 0.0 7 7.701905451408678E-5 0.0 0.0 0.6180008934210324 0.0 8 7.701905451408678E-5 0.0 0.0 0.8184429827939432 0.0 9 7.701905451408678E-5 0.0 0.0 0.8832160076402902 0.0 10 7.701905451408678E-5 0.0 0.0 1.0130316240237836 0.0 11 7.701905451408678E-5 0.0 0.0 1.1816263343551194 0.0 12 7.701905451408678E-5 0.0 0.0 1.330311619094564 0.0 13 7.701905451408678E-5 0.0 0.0 1.3917728245968053 0.0 14 7.701905451408678E-5 0.0 0.0 1.4167655077866264 0.0 15 7.701905451408678E-5 0.0 0.0 1.450268796500254 0.0 16 7.701905451408678E-5 0.0 0.0 1.5256704508695451 0.0 17 7.701905451408678E-5 0.0 0.0 1.6113541490164667 0.0 18 7.701905451408678E-5 0.0 0.0 1.7363945840200865 0.0 19 7.701905451408678E-5 0.0 0.0 1.8000508325759792 0.0 20 7.701905451408678E-5 0.0 0.0 1.8724102342919637 0.0 21 7.701905451408678E-5 0.0 0.0 1.9547821130947796 0.0 22 7.701905451408678E-5 0.0 0.0 2.050709345492075 0.0 23 7.701905451408678E-5 0.0 0.0 2.149524792433648 0.0 24 7.701905451408678E-5 0.0 0.0 2.22400221814877 0.0 25 7.701905451408678E-5 0.0 0.0 2.286772747577751 0.0 26 7.701905451408678E-5 0.0 0.0 2.3514302438423265 0.0 27 7.701905451408678E-5 0.0 0.0 2.4337636131178852 0.0 28 7.701905451408678E-5 0.0 0.0 2.5082410388330074 0.0 29 7.701905451408678E-5 0.0 0.0 2.5986228993052882 0.0 30 7.701905451408678E-5 0.0 0.0 2.7186185862382355 0.0 31 1.1552858177113018E-4 0.0 0.0 2.8138526471449037 0.0 32 1.1552858177113018E-4 0.0 0.0 2.902809655108674 0.0 33 1.1552858177113018E-4 0.0 0.0 2.991381567799874 0.0 34 1.1552858177113018E-4 0.0 0.0 3.1002480013555354 0.0 35 1.1552858177113018E-4 0.0 0.0 3.2293704462484016 0.0 36 1.1552858177113018E-4 0.0 0.0 3.328763536098831 0.0 37 1.1552858177113018E-4 0.0 0.0 3.4437144749611055 0.0 38 1.1552858177113018E-4 0.0 0.0 3.591437021519124 0.0 39 1.1552858177113018E-4 0.0 0.0 3.9828093470324557 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTACGA 30 2.166562E-6 45.000004 18 TTACGAT 30 2.166562E-6 45.000004 19 CCGTTTA 45 3.8562575E-10 45.000004 44 CGATACG 45 3.8562575E-10 45.000004 10 TATCCGT 45 3.8562575E-10 45.000004 41 ACTATCC 20 7.0349296E-4 45.0 43 GGCGTAA 50 2.1827873E-11 45.0 35 ATCACGC 20 7.0349296E-4 45.0 17 CATTACG 20 7.0349296E-4 45.0 19 CCGTACT 25 3.892168E-5 45.0 19 TACGATA 20 7.0349296E-4 45.0 17 TACGACT 20 7.0349296E-4 45.0 20 CGAATCG 25 3.892168E-5 45.0 43 GCGATCG 20 7.0349296E-4 45.0 9 ACCGTAT 40 6.8212103E-9 45.0 13 GTACGAA 20 7.0349296E-4 45.0 38 CCCGATA 20 7.0349296E-4 45.0 33 CCGTTAT 65 0.0 44.999996 25 TACGCAC 65 0.0 41.53846 30 CGGGTAT 245 0.0 41.32653 6 >>END_MODULE